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Report for Sequence Feature Glyma09g09070

Feature Type:gene_model
Chromosome:Gm09
Start:8576721
stop:8581710
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma09g09070
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G33140AT Annotation by Michelle Graham. TAIR10: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr4:15981648-15984135 FORWARD LENGTH=353 SoyBaseE_val: 2.00E-117ISS
GO:0016791GO-mf Annotation by Michelle Graham. GO Molecular Function: phosphatase activity SoyBaseN/AISS
PF06941PFAM 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) JGI ISS
UniRef100_A2Q3Z1UniRef Annotation by Michelle Graham. Most informative UniRef hit: Tac7077, putative n=1 Tax=Medicago truncatula RepID=A2Q3Z1_MEDTR SoyBaseE_val: 2.00E-154ISS
UniRef100_I1L1X1UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1L1X1_SOYBN SoyBaseE_val: 0ISS

Expression Patterns of Glyma09g09070
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma09g09070 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.09g077400 Wm82.a2.v1IGC As supplied by JGI

References for Glyma09g09070
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma09g09070
>Glyma09g09070.1   sequence type=CDS   gene model=Glyma09g09070   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGCTCTTATGTTAGGCTATGATCCTTGTTCCCATTTAAGTAGGGCCTTTTCCCATTTTCCTTCTGTTTCTTCCTCTGAGGCTAACAGAAACGTTGGATTCACTCTTAAAGCCTGTTTTGATGCCAATAGCGGTGATAATGCCAATAGGGTCTTTGTGAAGGAAAAGAAAAAACCCAATGGTTTTGCATGTGTTCCTCACCCTCCCTTGTTAGGTGGTTTAGAGAAGGGTATTGATGTTGAAGATAGATCTTTGGGTGGAAGTCCCACCAAACCCTTTTGTTTCTCTGATCAACAATTGCCCCAGAAACTTGTTGTTGCTGTTGATGTTGATGAAGTATTAGGAAACTTTGTGTCAGCTCTGAACAAGTTCATAGCAGATCGATACTCATCAAATTGTTCAGTTTCTGAGTATCACGTGTATGAGTTCTTCAAGATATGGAACTGCTCACGTGATGAAGCAAATACCCGTGTTCATGAGTTTTTTGAGACACCATACTTCAAGTCAGGGATCCAACCTATCCCAGGTGCTCAGACATCCCTGCAGAAGTTATCAACATTTTGTAGCCTATCAGTTGTAACATCTCGGCAAAATGTAATCAAGGATCATACACTTGAGTGGATAGAGAAGCATTTTTCAGGATTGTTTCAGGAGATTCACTTTGGAAACCACTTTGCCCTTGATGGGATGTCTAGACCAAAGTCGGAGATTTGTAGGTCTATAAATGCTACGGTTCTCATTGATGATAACCCAAGATACGCCATAGAGTGCGCTGAAGCCGGAATTAGAGTCCTACTTTTTGATTATGAAAACTCGTACCCTTGGTCCAAGACCAATTCAGCTGATGAGCATCCCCTGGTGATCAAAGTTAAGAACTGGGAAGAAGTTGAACAACAATTGATGTCATTGGTAGCTTTGTAG
Predicted protein sequences of Glyma09g09070
>Glyma09g09070.1   sequence type=predicted peptide   gene model=Glyma09g09070   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MALMLGYDPCSHLSRAFSHFPSVSSSEANRNVGFTLKACFDANSGDNANRVFVKEKKKPNGFACVPHPPLLGGLEKGIDVEDRSLGGSPTKPFCFSDQQLPQKLVVAVDVDEVLGNFVSALNKFIADRYSSNCSVSEYHVYEFFKIWNCSRDEANTRVHEFFETPYFKSGIQPIPGAQTSLQKLSTFCSLSVVTSRQNVIKDHTLEWIEKHFSGLFQEIHFGNHFALDGMSRPKSEICRSINATVLIDDNPRYAIECAEAGIRVLLFDYENSYPWSKTNSADEHPLVIKVKNWEEVEQQLMSLVAL*






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