Glyma09g08850 - SoyBase

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Report for Sequence Feature Glyma09g08850

Feature Type:	gene_model
Chromosome:	Gm09
Start:	8283122
stop:	8289395
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma09g08850

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT4G12010	AT	Annotation by Michelle Graham. TAIR10: Disease resistance protein (TIR-NBS-LRR class) family \| chr4:7197325-7201393 REVERSE LENGTH=1219	SoyBase	E_val: 6.00E-90	ISS
GO:0006612	GO-bp	Annotation by Michelle Graham. GO Biological Process: protein targeting to membrane	SoyBase	N/A	ISS
GO:0006952	GO-bp	Annotation by Michelle Graham. GO Biological Process: defense response	SoyBase	N/A	ISS
GO:0007165	GO-bp	Annotation by Michelle Graham. GO Biological Process: signal transduction	SoyBase	N/A	ISS
GO:0009963	GO-bp	Annotation by Michelle Graham. GO Biological Process: positive regulation of flavonoid biosynthetic process	SoyBase	N/A	ISS
GO:0010363	GO-bp	Annotation by Michelle Graham. GO Biological Process: regulation of plant-type hypersensitive response	SoyBase	N/A	ISS
GO:0005634	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: nucleus	SoyBase	N/A	ISS
GO:0043531	GO-mf	Annotation by Michelle Graham. GO Molecular Function: ADP binding	SoyBase	N/A	ISS
KOG4658	KOG	Apoptotic ATPase	JGI		ISS
PTHR11017	Panther	LEUCINE RICH REPEAT PROTEIN	JGI		ISS
PTHR11017:SF20	Panther	DISEASE RESISTANCE PROTEIN	JGI		ISS
PF00931	PFAM	NB-ARC domain	JGI		ISS
UniRef100_G7JKM7	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Tir-nbs-lrr resistance protein n=1 Tax=Medicago truncatula RepID=G7JKM7_MEDTR	SoyBase	E_val: 0	ISS
UniRef100_UPI000233D1E5	UniRef	Annotation by Michelle Graham. Best UniRef hit: UPI000233D1E5 related cluster n=1 Tax=unknown RepID=UPI000233D1E5	SoyBase	E_val: 0	ISS

Expression Patterns of Glyma09g08850

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma09g08850 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.09g075500	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma09g08850

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma09g08850

Limit To All Plant Sequences

>Glyma09g08850.2   sequence type=CDS   gene model=Glyma09g08850   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAGGCTGCATAAAACCCATGTTAACTTGAAAAGACTTGTTGGAATTGGCAAAAAAATTGCAGATGTGGAATTGTTGATACGCAAAGAACCAGAAGACATCCGTCTTATTGGATTATGGGGTATGGGCGGTATTGGCAAGACAATCCTTGCAGAACAAGTATTTATTAAACTACGGTCTGGATATGGAGGTTGTTTATTTTTAGCCAATGAAAGAGAACAATCAAGGAAACATGGGATGCTTTCTTTGAAGGAAAAAGTTTTTTCTGAACTACTAGGAAATGGTGTTAAAATTGACACGCCAAATTCGTTGCCTGATGATATTGTTAGGAGAATTGGTCGAATGAAAGTTCTTATTGTTCTTGATGATGTGAATGATTCAAATCACTTAGAAAAATTACTTGGACCTCTTGGTAATTTTGGATCAGGTAGTAGAATCATTGTAACAACTAGAGATATGCAAGTTCTTAAAGCTAACAAAGCTGATGAGGTATACCCGCTTAGAGAATTCAGTTTAAATCAAGCACTTGAACTTTTCAATTTGAATTTCTTTAACCAATGTGATGATCAAAGGGAGTATGACAACTTATCAAAAAGGGTGGTCAATTATGCCAAAGGCATTCCATTAGTTCTTAATGAGTTGGCTTATCTTCTTCGTGCAAGAAATAAGGAAGAGTGGGGAAGTGAGTTAGACAAGCTTGAAAAAATACCTCTTCCAGAAGTTTATGATAGAATGAAACTGAGCTATGATGATCTAGATCCCAAAGAGCAACAAATTTTTCTAGATCTTGCGTTTTTCTTTGGTAGATCACATACAGAGATAAAGGTGGACTATCTGAAATCTTTATTGAAAAAAGATGGTGAAAGTGGAGATTCAGTGTTTATTGTGTTAGAAAGGATGAAAGATAAAGCTCTCATAACTTCCTCTAAAGATAATTTTATATCTATGCATGATAGTTTACAAGTTATGGCTCAGGAGATTGTTCGTCGAAAGTCTAGCAATACTGGAAGCCACAGTCGGTTGTGGGATCTTGATGACATTCATGGAGAAATGAAAAATGACAAGGTTACTGAGGCCATTAGAAGTATACAAATTAACTTGCCAAAAATTAAGGAGCAAAAGTTAACGCATCACATATTTGCTAAGATGAGCAGTCTAAAATTTCTGAAAATTTCTGGCGAAGATAATTATGGTAACGATCAACTTATTCTTGCTGAAGAGCTTCAATTTTCGGCAAGTGAACTAAGATTTCTTTGTTGGGATCATTGCCCTCTAAAATCCTTACCAAAAAGTTTTTCTAAGGAAAAACTTGTAATGTTGAAATTGCTACGCAGCAAAATAGAAAAACTTTGGGATGGAGTTCAGAATTTGGTGAATTTAAAAGAAATTAACCTCAGTGGCTCTGAGAAGTTAAAGGAGCTGCCAGATTTATCAAAAGCCACAAATCTTGAAGTACTGCTTCTCCGTGGTTGTTCTATGTTGACTAGTGTGCATCCATCTGTTTTCTCTCTGATAAAACTTGAGAAATTGGACCTTTATGGCTGTGGCTCCCTTACCATTCTCTCAAGCCATTCTATATGCAGCCTTAGTTATCTCAACCTTGAACGTTGCGTGAACCTTAGGGAATTCTCAGTGATGTCGATGAATATGAAAGACCTGAGATTAGGATGGACCAAGGTCAAAGAACTTCCCTCATCATTTGAACAGCAAAGCAAGCTTAAATTGCTACATCTAAAAGGAAGTGCCATTGAGAGGTTACCTTCATCCTTCAACAACCTTACACAACTGCTACATCTAGAGGTAAGCAATTGCAGCAATCTTCAAACAATACCAGAGCTTCCGCCGCTCCTTAAAACTCTAAATGCACAATCCTGCACCTCACTTCTGACTCTACCAGAGATTTCCTTGTCCATTAAAACTCTAAGTGCCATAGACTGCAAATCATTGGAGACTGTATTTCTTTCATCGGCTGTCGAACAATTAAAGAAAAATAGGAGACAGGTTCGGTTCTGGAATTGCTTGAACTTGAATAAAGATTCTCTAGTGGCTATTGCGTTGAATGCACAAATCGATGTGATGAAATTTGCAAACCAACACTTATCTCCACCAAGTCAAGATCTTGTTCAAAATTACGATGATTATGATGCCAATCATCGCTCTTATCAAGTGGTTTACGTGTATCCAGGAAGCAATGTTCCAGAGTGGTTGGAGTATAAGACAACAAATGCTTATATAATTATTGATCTCTCTTCTGGTCCACCTTTCCCCTTCCTTGGCTTCATTTTCAGCTTTGTCATTGGTGAGTACCTACACACAGACACCAAGGGCAGACTTGAAGTTAGCATCACTATAAGTGATGATGAGAGTGAAGGCAATCAGGATAGTGTCAGAATGTACATAGATTTTGAAGGTAGGAAAATTGAATCAGATCATGTGTGTGTGGTGTATGACCAAAGATGTTCCAGCTTCCTAAGTAGCAAGGTCAAAAATCAAACAAGGTTAAAAATCAAGGTTACAATGGGGGTGCCAGATTATGCACTGCCACAAGGTTATAATAGAGGTGTGAGATTCGGTGTCAGTCCAATAAGCACCTCGGCTTATGAGAGTTTCATTCAACAAATGAAATTGCGTAATTCAATATCTCAGTTTCATTAA

Predicted protein sequences of Glyma09g08850

Limit To All Plant Sequences

>Glyma09g08850.2   sequence type=predicted peptide   gene model=Glyma09g08850   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MRLHKTHVNLKRLVGIGKKIADVELLIRKEPEDIRLIGLWGMGGIGKTILAEQVFIKLRSGYGGCLFLANEREQSRKHGMLSLKEKVFSELLGNGVKIDTPNSLPDDIVRRIGRMKVLIVLDDVNDSNHLEKLLGPLGNFGSGSRIIVTTRDMQVLKANKADEVYPLREFSLNQALELFNLNFFNQCDDQREYDNLSKRVVNYAKGIPLVLNELAYLLRARNKEEWGSELDKLEKIPLPEVYDRMKLSYDDLDPKEQQIFLDLAFFFGRSHTEIKVDYLKSLLKKDGESGDSVFIVLERMKDKALITSSKDNFISMHDSLQVMAQEIVRRKSSNTGSHSRLWDLDDIHGEMKNDKVTEAIRSIQINLPKIKEQKLTHHIFAKMSSLKFLKISGEDNYGNDQLILAEELQFSASELRFLCWDHCPLKSLPKSFSKEKLVMLKLLRSKIEKLWDGVQNLVNLKEINLSGSEKLKELPDLSKATNLEVLLLRGCSMLTSVHPSVFSLIKLEKLDLYGCGSLTILSSHSICSLSYLNLERCVNLREFSVMSMNMKDLRLGWTKVKELPSSFEQQSKLKLLHLKGSAIERLPSSFNNLTQLLHLEVSNCSNLQTIPELPPLLKTLNAQSCTSLLTLPEISLSIKTLSAIDCKSLETVFLSSAVEQLKKNRRQVRFWNCLNLNKDSLVAIALNAQIDVMKFANQHLSPPSQDLVQNYDDYDANHRSYQVVYVYPGSNVPEWLEYKTTNAYIIIDLSSGPPFPFLGFIFSFVIGEYLHTDTKGRLEVSITISDDESEGNQDSVRMYIDFEGRKIESDHVCVVYDQRCSSFLSSKVKNQTRLKIKVTMGVPDYALPQGYNRGVRFGVSPISTSAYESFIQQMKLRNSISQFH*

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