Glyma09g08250 - SoyBase

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Report for Sequence Feature Glyma09g08250

Feature Type:	gene_model
Chromosome:	Gm09
Start:	7326092
stop:	7327926
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma09g08250

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT1G20930	AT	Annotation by Michelle Graham. TAIR10: cyclin-dependent kinase B2;2 \| chr1:7292752-7294664 REVERSE LENGTH=315	SoyBase	E_val: 0	ISS
GO:0000087	GO-bp	Annotation by Michelle Graham. GO Biological Process: M phase of mitotic cell cycle	SoyBase	N/A	ISS
GO:0000280	GO-bp	Annotation by Michelle Graham. GO Biological Process: nuclear division	SoyBase	N/A	ISS
GO:0000911	GO-bp	Annotation by Michelle Graham. GO Biological Process: cytokinesis by cell plate formation	SoyBase	N/A	ISS
GO:0006275	GO-bp	Annotation by Michelle Graham. GO Biological Process: regulation of DNA replication	SoyBase	N/A	ISS
GO:0006468	GO-bp	Annotation by Michelle Graham. GO Biological Process: protein phosphorylation	SoyBase	N/A	ISS
GO:0007346	GO-bp	Annotation by Michelle Graham. GO Biological Process: regulation of mitotic cell cycle	SoyBase	N/A	ISS
GO:0008283	GO-bp	Annotation by Michelle Graham. GO Biological Process: cell proliferation	SoyBase	N/A	ISS
GO:0009755	GO-bp	Annotation by Michelle Graham. GO Biological Process: hormone-mediated signaling pathway	SoyBase	N/A	ISS
GO:0009934	GO-bp	Annotation by Michelle Graham. GO Biological Process: regulation of meristem structural organization	SoyBase	N/A	ISS
GO:0010389	GO-bp	Annotation by Michelle Graham. GO Biological Process: regulation of G2/M transition of mitotic cell cycle	SoyBase	N/A	ISS
GO:0042023	GO-bp	Annotation by Michelle Graham. GO Biological Process: DNA endoreduplication	SoyBase	N/A	ISS
GO:0046777	GO-bp	Annotation by Michelle Graham. GO Biological Process: protein autophosphorylation	SoyBase	N/A	ISS
GO:0051225	GO-bp	Annotation by Michelle Graham. GO Biological Process: spindle assembly	SoyBase	N/A	ISS
GO:0051322	GO-bp	Annotation by Michelle Graham. GO Biological Process: anaphase	SoyBase	N/A	ISS
GO:0005634	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: nucleus	SoyBase	N/A	ISS
GO:0004672	GO-mf	Annotation by Michelle Graham. GO Molecular Function: protein kinase activity	SoyBase	N/A	ISS
GO:0004674	GO-mf	Annotation by Michelle Graham. GO Molecular Function: protein serine/threonine kinase activity	SoyBase	N/A	ISS
GO:0004693	GO-mf	Annotation by Michelle Graham. GO Molecular Function: cyclin-dependent protein kinase activity	SoyBase	N/A	ISS
GO:0005515	GO-mf	Annotation by Michelle Graham. GO Molecular Function: protein binding	SoyBase	N/A	ISS
GO:0005524	GO-mf	Annotation by Michelle Graham. GO Molecular Function: ATP binding	SoyBase	N/A	ISS
GO:0016301	GO-mf	Annotation by Michelle Graham. GO Molecular Function: kinase activity	SoyBase	N/A	ISS
GO:0016772	GO-mf	Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring phosphorus-containing groups	SoyBase	N/A	ISS
KOG0594	KOG	Protein kinase PCTAIRE and related kinases	JGI		ISS
PTHR24056	Panther	CELL DIVISION PROTEIN KINASE	JGI		ISS
PTHR24056:SF101	Panther		JGI		ISS
PF00069	PFAM	Protein kinase domain	JGI		ISS
UniRef100_I1L1R9	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1L1R9_SOYBN	SoyBase	E_val: 0	ISS
UniRef100_Q6T2Z8	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Cyclin-dependent kinases CDKB n=1 Tax=Glycine max RepID=Q6T2Z8_SOYBN	SoyBase	E_val: 0	ISS

Expression Patterns of Glyma09g08250

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma09g08250 not represented in the dataset	Glyma09g08250 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma09g08250 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.09g071300	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma09g08250

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Transcripts of Glyma09g08250

Limit To All Plant Sequences

>Glyma09g08250.2   sequence type=transcript   gene model=Glyma09g08250   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
AGGGGTAGTAGTAGGGGGAGCGGGATTTGAAATTCAAAAAAACAAGGAAGCCGTTGGAGATGGAGATGGAGAAGACGGGCGCAGGAGTAGCAGTGTTGTCGGCGAAGGAGGCATTCGAGAAGCTTGAGAAGGTCGGAGAAGGGACATACGGGAAGGTGTACAGGGCACGAGAGAAGGCCACCGGAAAGATCGTTGCTCTCAAGAAGACTCGCCTCCACGAGGACCAAGAAGGCGTCCCTCCCACCACTCTCCGCGAGGTTTCCATCTTGCGAATGCTCTCTCGCGATCCCCATGTCGTTAGGTTAATGGATGTGAAGCAAGGCCAGAACAAGGAAGGGAAGACAGTGCTCTACTTGGTGTTTGAGTACATGGACACCGATCTCAAGAAATTCATTCGCTCTTTCCGCCAAACCGGACAAAGCATTCCACCCCAAACTATCAAAAGCTTGATGTATCAGCTTTGCAAGGGGATTGCTTTCTGCCACGGTCATGGGATCTTGCACAGGGACTTGAAGCCTCACAATCTGTTGATGGACCGGAAAACAATGATGCTTAAAATTGCTGATCTTGGACTCGCTCGGGCATTTACTGTGCCAATTAAGAAATATACACACGAGATATTAACCCTGTGGTATAGAGCTCCTGAAGTCCTCTTGGGTGCTACCCATTACTCAATGGCAGTGGACATATGGTCCGTTGGCTGCATATTTGCCGAACTTGTCACCAAACAAGCTCTCTTTGCTGGTGATTCCGAGCTGCAACAACTCCTGCATATATTCAGGCTATTAGGTACTCCAAATGAAGAGGTGTGGCCAGGGGTGAGTAAACTAAAGGACTGGCATGAATACCCCCAATGGAACCCTAAAAGTCTGTCAACGGCTGTTCCAGGTTTGGATGAGCTTGGACTTGATTTGCTATCCGTAAGTTGCTGCTCTTTAACTAACTCTTTCTAGTAGTGGTTCCTGTTGATTTTTTGTTTCATTATATTTTTCTCTTCTTTTCAGCAAATGTTGGAATATGAGCCTTCCAAGAGGATTTCTGCAAAGAAAGCAATGGAACATGCTTACTTCAATGACCTGGACAAGGGGCATCTTTAGAAAGACAAATTATTGATCTATGCTTCTCTTGAGCGTGTATCGTTTTAAGACAATAGACTTTTGCTGTTTAACTTTTCATATTTGTGGAATCATGGAGTGATTGATTGCCCTTGGGATTTATGGTCACTTCTGTCTTTTCTAGTCATTCTAATGAGTAATGAAAATATCAAGGTGTTTTCATGCTATTAATGAAATCCATTCCTTTTTTCTTGTGAACTCCCTTGTCTGGAAATTGCCACTATTATTCTCATTGAAAT

Coding sequences of Glyma09g08250

Limit To All Plant Sequences

>Glyma09g08250.1   sequence type=CDS   gene model=Glyma09g08250   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGAGATGGAGAAGACGGGCGCAGGAGTAGCAGTGTTGTCGGCGAAGGAGGCATTCGAGAAGCTTGAGAAGGTCGGAGAAGGGACATACGGGAAGGTGTACAGGGCACGAGAGAAGGCCACCGGAAAGATCGTTGCTCTCAAGAAGACTCGCCTCCACGAGGACCAAGAAGGCGTCCCTCCCACCACTCTCCGCGAGGTTTCCATCTTGCGAATGCTCTCTCGCGATCCCCATGTCGTTAGGTTAATGGATGTGAAGCAAGGCCAGAACAAGGAAGGGAAGACAGTGCTCTACTTGGTGTTTGAGTACATGGACACCGATCTCAAGAAATTCATTCGCTCTTTCCGCCAAACCGGACAAAGCATTCCACCCCAAACTATCAAAAGCTTGATGTATCAGCTTTGCAAGGGGATTGCTTTCTGCCACGGTCATGGGATCTTGCACAGGGACTTGAAGCCTCACAATCTGTTGATGGACCGGAAAACAATGATGCTTAAAATTGCTGATCTTGGACTCGCTCGGGCATTTACTGTGCCAATTAAGAAATATACACACGAGATATTAACCCTGTGGTATAGAGCTCCTGAAGTCCTCTTGGGTGCTACCCATTACTCAATGGCAGTGGACATATGGTCCGTTGGCTGCATATTTGCCGAACTTGTCACCAAACAAGCTCTCTTTGCTGGTGATTCCGAGCTGCAACAACTCCTGCATATATTCAGGCTATTAGGTACTCCAAATGAAGAGGTGTGGCCAGGGGTGAGTAAACTAAAGGACTGGCATGAATACCCCCAATGGAACCCTAAAAGTCTGTCAACGGCTGTTCCAGGTTTGGATGAGCTTGGACTTGATTTGCTATCCCAAATGTTGGAATATGAGCCTTCCAAGAGGATTTCTGCAAAGAAAGCAATGGAACATGCTTACTTCAATGACCTGGACAAGGGGCATCTTTAG

>Glyma09g08250.2   sequence type=CDS   gene model=Glyma09g08250   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGAGATGGAGAAGACGGGCGCAGGAGTAGCAGTGTTGTCGGCGAAGGAGGCATTCGAGAAGCTTGAGAAGGTCGGAGAAGGGACATACGGGAAGGTGTACAGGGCACGAGAGAAGGCCACCGGAAAGATCGTTGCTCTCAAGAAGACTCGCCTCCACGAGGACCAAGAAGGCGTCCCTCCCACCACTCTCCGCGAGGTTTCCATCTTGCGAATGCTCTCTCGCGATCCCCATGTCGTTAGGTTAATGGATGTGAAGCAAGGCCAGAACAAGGAAGGGAAGACAGTGCTCTACTTGGTGTTTGAGTACATGGACACCGATCTCAAGAAATTCATTCGCTCTTTCCGCCAAACCGGACAAAGCATTCCACCCCAAACTATCAAAAGCTTGATGTATCAGCTTTGCAAGGGGATTGCTTTCTGCCACGGTCATGGGATCTTGCACAGGGACTTGAAGCCTCACAATCTGTTGATGGACCGGAAAACAATGATGCTTAAAATTGCTGATCTTGGACTCGCTCGGGCATTTACTGTGCCAATTAAGAAATATACACACGAGATATTAACCCTGTGGTATAGAGCTCCTGAAGTCCTCTTGGGTGCTACCCATTACTCAATGGCAGTGGACATATGGTCCGTTGGCTGCATATTTGCCGAACTTGTCACCAAACAAGCTCTCTTTGCTGGTGATTCCGAGCTGCAACAACTCCTGCATATATTCAGGCTATTAGGTACTCCAAATGAAGAGGTGTGGCCAGGGGTGAGTAAACTAAAGGACTGGCATGAATACCCCCAATGGAACCCTAAAAGTCTGTCAACGGCTGTTCCAGGTTTGGATGAGCTTGGACTTGATTTGCTATCCGTAAGTTGCTGCTCTTTAACTAACTCTTTCTAG

Predicted protein sequences of Glyma09g08250

Limit To All Plant Sequences

>Glyma09g08250.1   sequence type=predicted peptide   gene model=Glyma09g08250   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MEMEKTGAGVAVLSAKEAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDQEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGKTVLYLVFEYMDTDLKKFIRSFRQTGQSIPPQTIKSLMYQLCKGIAFCHGHGILHRDLKPHNLLMDRKTMMLKIADLGLARAFTVPIKKYTHEILTLWYRAPEVLLGATHYSMAVDIWSVGCIFAELVTKQALFAGDSELQQLLHIFRLLGTPNEEVWPGVSKLKDWHEYPQWNPKSLSTAVPGLDELGLDLLSQMLEYEPSKRISAKKAMEHAYFNDLDKGHL*

>Glyma09g08250.2   sequence type=predicted peptide   gene model=Glyma09g08250   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MEMEKTGAGVAVLSAKEAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDQEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGKTVLYLVFEYMDTDLKKFIRSFRQTGQSIPPQTIKSLMYQLCKGIAFCHGHGILHRDLKPHNLLMDRKTMMLKIADLGLARAFTVPIKKYTHEILTLWYRAPEVLLGATHYSMAVDIWSVGCIFAELVTKQALFAGDSELQQLLHIFRLLGTPNEEVWPGVSKLKDWHEYPQWNPKSLSTAVPGLDELGLDLLSVSCCSLTNSF*

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