Report for Sequence Feature Glyma09g08000
Feature Type: gene_model
Chromosome: Gm09
Start: 7018262
stop: 7032302
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma09g08000
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT5G35560 AT
Annotation by Michelle Graham. TAIR10: DENN (AEX-3) domain-containing protein | chr5:13742458-13747464 REVERSE LENGTH=765
SoyBase E_val: 0 ISS
GO:0008150 GO-bp
Annotation by Michelle Graham. GO Biological Process: biological process
SoyBase N/A ISS
GO:0005634 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: nucleus
SoyBase N/A ISS
GO:0003674 GO-mf
Annotation by Michelle Graham. GO Molecular Function: molecular function
SoyBase N/A ISS
PTHR15288 Panther
SUPPRESSION OF TUMORIGENICITY 5 (ST5)
JGI ISS
PF02141 PFAM
DENN (AEX-3) domain
JGI ISS
PF03456 PFAM
uDENN domain
JGI ISS
UniRef100_B9RRB9 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Suppression of tumorigenicity, putative n=1 Tax=Ricinus communis RepID=B9RRB9_RICCO
SoyBase E_val: 0 ISS
UniRef100_I1L1P1 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1L1P1_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma09g08000
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma09g08000
Paralog Evidence Comments
Glyma15g19470 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma09g08000 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.09g068800 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma09g08000
Transcripts of Glyma09g08000
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma09g08000.2 sequence type=transcript gene model=Glyma09g08000 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
GATTCGAGAACGAGAATATGCAAGTGTGAGTGGGACGATGGGGTGAGAAACAGGAGTACGCAACATCCAATCCAACGATCCAAACAAAACTGCAAAACAATATACAATTGAATAGCAGTGGCGTTTCGACGCGCACGAAGCTTCTTCTACTTCTTCCACTGCGCCACATTCATTCATTCAATTTTATTGTTTTTACCCTAATTACTATCGCCAACCCCCTTTTTTTTTTTCTTCTTCTTCCTTTTTTCAATTTCGATTGCATGGACCATTTCCCATTCTAACACCTACAATTTTTCTTTAATATTTTCTCGTCCCTGAGGCAGAGAAAAAAAGAAAAAACTACCGAAGAAGTTGATGAATTAATTTAATCTTAATTCTTAAATATTTTTTCTCTTTCTCTTTCCAACCTCAACCCCACCCTTAAGCCTCTCTCTCTCTCTCTCTCTCTCTCGCTCTCTCTCTCTCTATTCTATTGCTTCCTTTTTTCCGCTATTTTCTGGAACAAATGGCTGGAGTGACAAAGGAGGAAGAGAGGGGTAGTCCTAGTTGGGGTGCTTCATTTTTTACGCAGACAACAGAGGATGTGGCTAGAGCTGTTGCCACTGCTATGAATTCTCAGAGGCCATCTGTGGTATATTCATTGAAAAATGATCATGGTGGCAGCCAACTTCAAAGGCTGCAGTATCAAGTTACGAAAATGATAAAAGGATTTTCTAGCCCTCCAGAAGTTAAATATACAAATTACAATCCGGAAATCTTGACAACTCAGAAGCGTCAATGGGCTGCAAACTTTCAGTTGCAGTACACGGACCATAAGTCTTGGAAGGAGCCAACAAAGCTGTTTGAAAGCATGGTGGTTGCTGGACTTCATCCTAATTGTGATATTCAGGCACTGCAAAGGCAATGTTTTTTAAGAAAGTCTGAAGGCCCTGGTAAATTGAGAAGTGCACTTGGTTATCAGAATCAGTCCCGTGTGGAAGTGGAACCCAATCTAGAACCTCAGGTTTTATTTGTTTACCCTCCAGAAAAACAGCTGCCTCTTAAAGGCAAGGATCTTCTCTCTTTCTGCTTCCCTGGAGGCTTGGAGGTTAATGCTGTTGAGAGAACCCCTTCCATGAGTGAGTTGAACGAAATTCTATTTGGGCAGGAACACCTTAAACAAAGGGATCCGTCTTTTGTATTTAGGCTACAGGGTGCGGATAATTCAACACTTTATGGGTGCTGTCTCTTAGTTGAAGAGTTAGTGCAAAAACCCTCTGGATTTCTCTCCCTGATTTCTGATAAGCAGTTGACTTATTCTCCTTTGAAACGCCAACGGCATATATTAACCACACAGAGATGTTACTGCATTCTCTCAAGGCTCCCATTTTTTGAATTGCACTTTGGTGTATTAAATAGCATCTTCATGCAAGAACGGCTAGAGCGGTTGACGGGAAGTGTTGGAGATTTAAATTTAGAATATGTTGAAGGTAGCTGCGAGGAAGAAAATTTGGAGGAAAAATCAGAGTGCATGTTGGTGAATGATAGATTAGAAGATAGACATGATGACAATCCAAGGATTTCTCAATCAAGCCTAAGAAATTCCTCACCTGAAAACATTGAGGATGATAGTAATTATCCTGAGAAACACATTGTTAATGGGGATCTGCATACATTTAAGGAGAGAGTCAATGATGACAATGCCGTGCCTAGTGATCCTGAAACTGATAGAAAAACTGTCAAAGAATCTGGTCCTACAAATGCTGAAGATAGTGATTTGTATGGGGATGCTTTTGTAACAAACAAACAGTCTGAAGATAGGCGTTTACCAAATGCTATTCTACCACTCCTGCGCTATAGCCAGTATGAAAGCTCTGAATCTTCCTGCAGTTTTCAGGGTTCTCCTTGTGATGACAGAAATTTTAGGAGTGATGCTGATGATACTGAGACAGAAGATGCTTCATTCTCTGGCCAAGAGGATTTAAATGACCTAAATGATATTCTTGAATGGGCGAAGGCAAATAACTGTGGACCATTACAGATTATAAGTGAGTATTATTGCTTAGCTTGCCCTGCAAGGGACTCAGCACTTAGGTTTCATCCTTTGGAACACCTGCATCCCTTGGAATATCACAGACCAGATGAGACAATTCTACATCTTGCCGGTTCAACTGTTGACTTGAAATCTTGCAGTACAGGTCTGGAATTTGCAGAGGCACATAATTCTCTTTTGGCTGAGGAGGAGGCAACTGCATTATCTATATGGGCTGTAGCATGCATGTGTGGTACCTTGAGACTTGAAAATGTGTTAACATTCTTTGCAGGAGCTCTACTGGAGAAGCAGATTGTTTTTGTCTGTTCTAATTTGGGAATCCTATCTGCTTCAGTTTTATCAGTTATTCCACTAATCCGGCCCTACCAATGGCAAAGCTTGCTTATGCCAGTTTTACCAAATGGCATGCTCGAGTTTCTGGATGCACCTGTCCCCTACATAGTTGGTATCAAGAACAAGACCAATGAAGTTCAGTCAAAGTTAACTAATAATGTTATCCTGATTGACGTCAGCAGAAACCAGGTGAAGTCATCAACAGTACCTCAACTGCCAAGGCAGAAAGAGTTAATCTCTTCTTTACGTCCTTATCATGAAACTCTTGTGGGAGAAAGTTACTTGGGTAGGAGAAGGCCAGTGTATGAATGCACGGAAGTGCAGAAGCTGCTAAGGGGTTCCTATCGGAGTTAAGGTCTTATTTGGATTCTCTTTGCTATAACATTCGTTCTCATACAATAACCAATGTACAATCCAATGATGATAAGGTATCCTTGCTTTTGAAGGAGAGTTTCATTGACTCGTTTCCTTATCGTGATCAGCCTTTCATGAAGCTTTTCGTGGATACACAGCTCTTCTCTGTTCATACAGATATTGTTCTCTCTTTCTTCCAAAAGGAATAACGCTATTTGGGAATATTACTGCCTTGCAAAGCTTGAACGCAAGTTCAGTGCTGTATTCTTAAATTATGTATGAGCTAAAATTTTCTCCCTACACGTGACGCCTAATGTTACCAGCTTAGGCTTGCCGCAACACCTGTATATAATTAGTTAGATAGTATATTTAATCTTAATAAGTGCTGTTAAGGTTTCATTCTATGTAAATGACATTTTTTCATACACCAAAGGTAAAAGTTATGCTTTATGCTCACAAGATACTGTGAACGCTAACACCTGAACCCTCCGTTACGTATCACTTGATTTCGATATGACCTAGTATGTTTAAATGGTCTTTAAATATGATGCAGAACTTGCTAGCAGAAAAGCCAAGTACGTTTTGTAAATCCTCGTAAACATATGGAAGGAATCATGGATATTCATTCATTATGAAGACCAACTGTACGCTTGAATATTTGTAATAATGTTCCTCCAATTACAAGCATTTCTCCTCCTTCCTCTAATTACAAGCATTTCAATTAAATTTCATATTGAGGTCTAGCTCAACTGGTTTGAATAGAATGTGAGTTATTGAAAAAAAT
Coding sequences of Glyma09g08000
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma09g08000.1 sequence type=CDS gene model=Glyma09g08000 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGCTGGAGTGACAAAGGAGGAAGAGAGGGGTAGTCCTAGTTGGGGTGCTTCATTTTTTACGCAGACAACAGAGGATGTGGCTAGAGCTGTTGCCACTGCTATGAATTCTCAGAGGCCATCTGTGGTATATTCATTGAAAAATGATCATGGTGGCAGCCAACTTCAAAGGCTGCAGTATCAAGTTACGAAAATGATAAAAGGATTTTCTAGCCCTCCAGAAGTTAAATATACAAATTACAATCCGGAAATCTTGACAACTCAGAAGCGTCAATGGGCTGCAAACTTTCAGTTGCAGTACACGGACCATAAGTCTTGGAAGGAGCCAACAAAGCTGTTTGAAAGCATGGTGGTTGCTGGACTTCATCCTAATTGTGATATTCAGGCACTGCAAAGGCAATGTTTTTTAAGAAAGTCTGAAGGCCCTGGTAAATTGAGAAGTGCACTTGGTTATCAGAATCAGTCCCGTGTGGAAGTGGAACCCAATCTAGAACCTCAGGTTTTATTTGTTTACCCTCCAGAAAAACAGCTGCCTCTTAAAGGCAAGGATCTTCTCTCTTTCTGCTTCCCTGGAGGCTTGGAGGTTAATGCTGTTGAGAGAACCCCTTCCATGAGTGAGTTGAACGAAATTCTATTTGGGCAGGAACACCTTAAACAAAGGGATCCGTCTTTTGTATTTAGGCTACAGGGTGCGGATAATTCAACACTTTATGGGTGCTGTCTCTTAGTTGAAGAGTTAGTGCAAAAACCCTCTGGATTTCTCTCCCTGATTTCTGATAAGCAGTTGACTTATTCTCCTTTGAAACGCCAACGGCATATATTAACCACACAGAGATGTTACTGCATTCTCTCAAGGCTCCCATTTTTTGAATTGCACTTTGGTGTATTAAATAGCATCTTCATGCAAGAACGGCTAGAGCGGTTGACGGGAAGTGTTGGAGATTTAAATTTAGAATATGTTGAAGGTAGCTGCGAGGAAGAAAATTTGGAGGAAAAATCAGAGTGCATGTTGGTGAATGATAGATTAGAAGATAGACATGATGACAATCCAAGGATTTCTCAATCAAGCCTAAGAAATTCCTCACCTGAAAACATTGAGGATGATAGTAATTATCCTGAGAAACACATTGTTAATGGGGATCTGCATACATTTAAGGAGAGAGTCAATGATGACAATGCCGTGCCTAGTGATCCTGAAACTGATAGAAAAACTGTCAAAGAATCTGGTCCTACAAATGCTGAAGATAGTGATTTGTATGGGGATGCTTTTGTAACAAACAAACAGTCTGAAGATAGGCGTTTACCAAATGCTATTCTACCACTCCTGCGCTATAGCCAGTATGAAAGCTCTGAATCTTCCTGCAGTTTTCAGGGTTCTCCTTGTGATGACAGAAATTTTAGGAGTGATGCTGATGATACTGAGACAGAAGATGCTTCATTCTCTGGCCAAGAGGATTTAAATGACCTAAATGATATTCTTGAATGGGCGAAGGCAAATAACTGTGGACCATTACAGATTATAAGTGAGTATTATTGCTTAGCTTGCCCTGCAAGGGACTCAGCACTTAGGTTTCATCCTTTGGAACACCTGCATCCCTTGGAATATCACAGACCAGATGAGACAATTCTACATCTTGCCGGTTCAACTGTTGACTTGAAATCTTGCAGTACAGGTCTGGAATTTGCAGAGGCACATAATTCTCTTTTGGCTGAGGAGGAGGCAACTGCATTATCTATATGGGCTGTAGCATGCATGTGTGGTACCTTGAGACTTGAAAATGTGTTAACATTCTTTGCAGGAGCTCTACTGGAGAAGCAGATTGTTTTTGTCTGTTCTAATTTGGGAATCCTATCTGCTTCAGTTTTATCAGTTATTCCACTAATCCGGCCCTACCAATGGCAAAGCTTGCTTATGCCAGTTTTACCAAATGGCATGCTCGAGTTTCTGGATGCACCTGTCCCCTACATAGTTGGTATCAAGAACAAGACCAATGAAGTTCAGTCAAAGTTAACTAATAATGTTATCCTGATTGACGTCAGCAGAAACCAGGTGAAGTCATCAACAGTACCTCAACTGCCAAGGCAGAAAGAGTTAATCTCTTCTTTACGTCCTTATCATGAAACTCTTGTGGGAGAAAGTTACTTGGGTAGGAGAAGGCCAGTGTATGAATGCACGGAAGTGCAGACAGAAGCTGCTAAGGGGTTCCTATCGGAGTTAAGGTCTTATTTGGATTCTCTTTGCTATAACATTCGTTCTCATACAATAACCAATGTACAATCCAATGATGATAAGGTATCCTTGCTTTTGAAGGAGAGTTTCATTGACTCGTTTCCTTATCGTGATCAGCCTTTCATGAAGCTTTTCGTGGATACACAGCTCTTCTCTGTTCATACAGATATTGTTCTCTCTTTCTTCCAAAAGGAATAA
>Glyma09g08000.2 sequence type=CDS gene model=Glyma09g08000 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGCTGGAGTGACAAAGGAGGAAGAGAGGGGTAGTCCTAGTTGGGGTGCTTCATTTTTTACGCAGACAACAGAGGATGTGGCTAGAGCTGTTGCCACTGCTATGAATTCTCAGAGGCCATCTGTGGTATATTCATTGAAAAATGATCATGGTGGCAGCCAACTTCAAAGGCTGCAGTATCAAGTTACGAAAATGATAAAAGGATTTTCTAGCCCTCCAGAAGTTAAATATACAAATTACAATCCGGAAATCTTGACAACTCAGAAGCGTCAATGGGCTGCAAACTTTCAGTTGCAGTACACGGACCATAAGTCTTGGAAGGAGCCAACAAAGCTGTTTGAAAGCATGGTGGTTGCTGGACTTCATCCTAATTGTGATATTCAGGCACTGCAAAGGCAATGTTTTTTAAGAAAGTCTGAAGGCCCTGGTAAATTGAGAAGTGCACTTGGTTATCAGAATCAGTCCCGTGTGGAAGTGGAACCCAATCTAGAACCTCAGGTTTTATTTGTTTACCCTCCAGAAAAACAGCTGCCTCTTAAAGGCAAGGATCTTCTCTCTTTCTGCTTCCCTGGAGGCTTGGAGGTTAATGCTGTTGAGAGAACCCCTTCCATGAGTGAGTTGAACGAAATTCTATTTGGGCAGGAACACCTTAAACAAAGGGATCCGTCTTTTGTATTTAGGCTACAGGGTGCGGATAATTCAACACTTTATGGGTGCTGTCTCTTAGTTGAAGAGTTAGTGCAAAAACCCTCTGGATTTCTCTCCCTGATTTCTGATAAGCAGTTGACTTATTCTCCTTTGAAACGCCAACGGCATATATTAACCACACAGAGATGTTACTGCATTCTCTCAAGGCTCCCATTTTTTGAATTGCACTTTGGTGTATTAAATAGCATCTTCATGCAAGAACGGCTAGAGCGGTTGACGGGAAGTGTTGGAGATTTAAATTTAGAATATGTTGAAGGTAGCTGCGAGGAAGAAAATTTGGAGGAAAAATCAGAGTGCATGTTGGTGAATGATAGATTAGAAGATAGACATGATGACAATCCAAGGATTTCTCAATCAAGCCTAAGAAATTCCTCACCTGAAAACATTGAGGATGATAGTAATTATCCTGAGAAACACATTGTTAATGGGGATCTGCATACATTTAAGGAGAGAGTCAATGATGACAATGCCGTGCCTAGTGATCCTGAAACTGATAGAAAAACTGTCAAAGAATCTGGTCCTACAAATGCTGAAGATAGTGATTTGTATGGGGATGCTTTTGTAACAAACAAACAGTCTGAAGATAGGCGTTTACCAAATGCTATTCTACCACTCCTGCGCTATAGCCAGTATGAAAGCTCTGAATCTTCCTGCAGTTTTCAGGGTTCTCCTTGTGATGACAGAAATTTTAGGAGTGATGCTGATGATACTGAGACAGAAGATGCTTCATTCTCTGGCCAAGAGGATTTAAATGACCTAAATGATATTCTTGAATGGGCGAAGGCAAATAACTGTGGACCATTACAGATTATAAGTGAGTATTATTGCTTAGCTTGCCCTGCAAGGGACTCAGCACTTAGGTTTCATCCTTTGGAACACCTGCATCCCTTGGAATATCACAGACCAGATGAGACAATTCTACATCTTGCCGGTTCAACTGTTGACTTGAAATCTTGCAGTACAGGTCTGGAATTTGCAGAGGCACATAATTCTCTTTTGGCTGAGGAGGAGGCAACTGCATTATCTATATGGGCTGTAGCATGCATGTGTGGTACCTTGAGACTTGAAAATGTGTTAACATTCTTTGCAGGAGCTCTACTGGAGAAGCAGATTGTTTTTGTCTGTTCTAATTTGGGAATCCTATCTGCTTCAGTTTTATCAGTTATTCCACTAATCCGGCCCTACCAATGGCAAAGCTTGCTTATGCCAGTTTTACCAAATGGCATGCTCGAGTTTCTGGATGCACCTGTCCCCTACATAGTTGGTATCAAGAACAAGACCAATGAAGTTCAGTCAAAGTTAACTAATAATGTTATCCTGATTGACGTCAGCAGAAACCAGGTGAAGTCATCAACAGTACCTCAACTGCCAAGGCAGAAAGAGTTAATCTCTTCTTTACGTCCTTATCATGAAACTCTTGTGGGAGAAAGTTACTTGGGTAGGAGAAGGCCAGTGTATGAATGCACGGAAGTGCAGAAGCTGCTAAGGGGTTCCTATCGGAGTTAA
Predicted protein sequences of Glyma09g08000
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma09g08000.1 sequence type=predicted peptide gene model=Glyma09g08000 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MAGVTKEEERGSPSWGASFFTQTTEDVARAVATAMNSQRPSVVYSLKNDHGGSQLQRLQYQVTKMIKGFSSPPEVKYTNYNPEILTTQKRQWAANFQLQYTDHKSWKEPTKLFESMVVAGLHPNCDIQALQRQCFLRKSEGPGKLRSALGYQNQSRVEVEPNLEPQVLFVYPPEKQLPLKGKDLLSFCFPGGLEVNAVERTPSMSELNEILFGQEHLKQRDPSFVFRLQGADNSTLYGCCLLVEELVQKPSGFLSLISDKQLTYSPLKRQRHILTTQRCYCILSRLPFFELHFGVLNSIFMQERLERLTGSVGDLNLEYVEGSCEEENLEEKSECMLVNDRLEDRHDDNPRISQSSLRNSSPENIEDDSNYPEKHIVNGDLHTFKERVNDDNAVPSDPETDRKTVKESGPTNAEDSDLYGDAFVTNKQSEDRRLPNAILPLLRYSQYESSESSCSFQGSPCDDRNFRSDADDTETEDASFSGQEDLNDLNDILEWAKANNCGPLQIISEYYCLACPARDSALRFHPLEHLHPLEYHRPDETILHLAGSTVDLKSCSTGLEFAEAHNSLLAEEEATALSIWAVACMCGTLRLENVLTFFAGALLEKQIVFVCSNLGILSASVLSVIPLIRPYQWQSLLMPVLPNGMLEFLDAPVPYIVGIKNKTNEVQSKLTNNVILIDVSRNQVKSSTVPQLPRQKELISSLRPYHETLVGESYLGRRRPVYECTEVQTEAAKGFLSELRSYLDSLCYNIRSHTITNVQSNDDKVSLLLKESFIDSFPYRDQPFMKLFVDTQLFSVHTDIVLSFFQKE*
>Glyma09g08000.2 sequence type=predicted peptide gene model=Glyma09g08000 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MAGVTKEEERGSPSWGASFFTQTTEDVARAVATAMNSQRPSVVYSLKNDHGGSQLQRLQYQVTKMIKGFSSPPEVKYTNYNPEILTTQKRQWAANFQLQYTDHKSWKEPTKLFESMVVAGLHPNCDIQALQRQCFLRKSEGPGKLRSALGYQNQSRVEVEPNLEPQVLFVYPPEKQLPLKGKDLLSFCFPGGLEVNAVERTPSMSELNEILFGQEHLKQRDPSFVFRLQGADNSTLYGCCLLVEELVQKPSGFLSLISDKQLTYSPLKRQRHILTTQRCYCILSRLPFFELHFGVLNSIFMQERLERLTGSVGDLNLEYVEGSCEEENLEEKSECMLVNDRLEDRHDDNPRISQSSLRNSSPENIEDDSNYPEKHIVNGDLHTFKERVNDDNAVPSDPETDRKTVKESGPTNAEDSDLYGDAFVTNKQSEDRRLPNAILPLLRYSQYESSESSCSFQGSPCDDRNFRSDADDTETEDASFSGQEDLNDLNDILEWAKANNCGPLQIISEYYCLACPARDSALRFHPLEHLHPLEYHRPDETILHLAGSTVDLKSCSTGLEFAEAHNSLLAEEEATALSIWAVACMCGTLRLENVLTFFAGALLEKQIVFVCSNLGILSASVLSVIPLIRPYQWQSLLMPVLPNGMLEFLDAPVPYIVGIKNKTNEVQSKLTNNVILIDVSRNQVKSSTVPQLPRQKELISSLRPYHETLVGESYLGRRRPVYECTEVQKLLRGSYRS*