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Report for Sequence Feature Glyma09g06810
Feature Type: gene_model
Chromosome: Gm09
Start: 5608099
stop: 5612871
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma09g06810
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT5G57130 AT
Annotation by Michelle Graham. TAIR10: Clp amino terminal domain-containing protein | chr5:23145291-23149395 FORWARD LENGTH=1028
SoyBase E_val: 0 ISS
GO:0009855 GO-bp
Annotation by Michelle Graham. GO Biological Process: determination of bilateral symmetry
SoyBase N/A ISS
GO:0009887 GO-bp
Annotation by Michelle Graham. GO Biological Process: organ morphogenesis
SoyBase N/A ISS
GO:0009944 GO-bp
Annotation by Michelle Graham. GO Biological Process: polarity specification of adaxial/abaxial axis
SoyBase N/A ISS
GO:0010014 GO-bp
Annotation by Michelle Graham. GO Biological Process: meristem initiation
SoyBase N/A ISS
GO:0010051 GO-bp
Annotation by Michelle Graham. GO Biological Process: xylem and phloem pattern formation
SoyBase N/A ISS
GO:0010075 GO-bp
Annotation by Michelle Graham. GO Biological Process: regulation of meristem growth
SoyBase N/A ISS
GO:0019538 GO-bp
Annotation by Michelle Graham. GO Biological Process: protein metabolic process
SoyBase N/A ISS
GO:0048439 GO-bp
Annotation by Michelle Graham. GO Biological Process: flower morphogenesis
SoyBase N/A ISS
GO:0048519 GO-bp
Annotation by Michelle Graham. GO Biological Process: negative regulation of biological process
SoyBase N/A ISS
GO:0005575 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: cellular component
SoyBase N/A ISS
KOG1051
KOG
Chaperone HSP104 and related ATP-dependent Clp proteases
JGI ISS
PTHR11638 Panther
ATP-DEPENDENT CLP PROTEASE
JGI ISS
PTHR11638:SF2 Panther
CLPA/CLPB/CLPC-RELATED
JGI ISS
UniRef100_B5A254 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Heat shock-like protein n=1 Tax=Arabidopsis thaliana RepID=B5A254_ARATH
SoyBase E_val: 0 ISS
UniRef100_UPI000233CD88 UniRef
Annotation by Michelle Graham. Best UniRef hit: UPI000233CD88 related cluster n=1 Tax=unknown RepID=UPI000233CD88
SoyBase E_val: 0 ISS
Expression Patterns of Glyma09g06810
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma09g06810
Paralog Evidence Comments
Glyma15g18110 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma09g06810 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.09g060500 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma09g06810
Coding sequences of Glyma09g06810
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma09g06810.2 sequence type=CDS gene model=Glyma09g06810 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGCGCTCAGGAGCTTGTACATTGCAACAGACCCTCACAGCAGAGGCTGCTTCAGTGTTGAAGCACTCTCTCGGGTTGGCACGCAGAAGGGGCCATGCACAGGTCACCCCTCTGCATGTTGCTGCAACTTTGCTCACCCTAAGAGCCAGTTCCTTAAGAAGGGCTTGTCTCAAGTCTCAACCACAAACACAAACACATTCACACCACCCTCTTCAGTGCAGAGCCCTTGAGCTTTGCTTCAATGTTGCCCTCAACAGGCTCCCTACAACTCCTGGCCCTTTGCTCCACACACAACCCTCTCTCTCCAATGCTCTCATTGCTGCTCTCAAGAGAGCACAGGCTCACCAGAGAAGGGGGTGCATTGAGCAACAACAGCAACAACAGCAACCACCTCTTCTCACCATCAAGGTTGAGCTTGAACAGCTCATCATTTCTATCCTTGATGACCCTAGTGTTAGTAGGGTTATGAGAGAAGCTGGTTTTTCAAGCACTGTTGTTAAGAGTAATATTGAAGACACTTCTTCTTCAGCACCTTCTGTTTTCTACAACAGTTCTGGTGGTGGTGTTTTCTCTTCTCCTGGCTCACCTTCTCCCAGTGAGAAGAATAATGTTTTCAGGCAGAACCATTTCTTAGCTGCTTACACTTCTAATGAGTTTAGTAGTACTTCTCCTAATTCTTCACTTTTGTTGAAGAAGGCTTCAGTGTTTCCCATCATTGAGTCACCACCACCCTCTTCATCTAAGGAGGATATCAAGGTTGTTTTTGATGTTCTCTTGAGGAAGAAGAAGAGGAACACTGTGATAGTTGGTGATTCATTGGCACTCACTGAAGGTCTTGTGGGGGAGCTTATGGGGAAATTGGAGAGAGGAGAGGTTCCTGATGAGTTGAAGTCAACACATTTCATCAAGTTTCAGCTTGCATCACCGGTTTCTTTGAGGTTCATGAAAAGGGATGAAGTGGAGATGAGTCTTTCTGCACTGAAGAGGAAGGTGGATTCTGTTGTTGTATCAGGTGGAGGAGGAGCCATTTTCTATGTTGGAGACTTGAAGTGGACAGTGGAATTAGGAACAAGTGAAAAAGAGGAAGGTGGTGATGTTTGTGGCTATAATTATTATTATAACCCTGTTGATCATCTCGTTGCTGAGATAGGGAAGTTGTTTTGTGACTCCAATAACACTACTAAGGTGTGGCTTTTGGCCACAGCAAGTTATCAAACATACATGAGGTGCCAAATGAGGCAACCCCCTCTTGAGACTCAGTGGTCTCTTCAAGCTGTTCCTGTTCCATCAGGTGGACTTGGCTTGAGTCTTCATGCTTCAAGTGTTCATGATTCAAAGATGACAATCTCCCAGAATCCATCCAATATGATGGAAACAAAGCTCTTCAGTAGCAAAAAGGAGGAACAGGATAAACTCAACTGTTGTGAAGAATGTGCCTCCAGTTATGAAAAAGAAGCTCAGTTGTTCAAACCAGGCCAGAAGAAACTGTTACCATCCTGGCTTCAGTCTCATACCACCGAAGCCCATCAAAAGGATGAGTTAGCTCAGCTGAAAAGGAAATGGAACAGACTATGCCACTGTCTGCACCAGAGCAAGCAGCCTCAGAACCATTGGAGCAACACTTTACATGGCAATTATCACAGTTCAAATGGCAACAAGATCTACCATTACAATTCATCATATCCCTGGTGGCCAAACCAAGGCACTAGTGTCTTCACAGATTCAAGCTCCATATCTTTTGCTGATTCACCTCCAAAACCAGCTTATAGCTCCAACAACAACATTGTGCCTCGGTTCAGGCGCCAGCAATCATGCACCATTGAGTTCAATTTCAGTGATGTCACTCAGAAAAAGCCATCCACAACAGCCTTGGATTCTCTCAAGGGCATGGAAGGTAATAATAGTAGTGAAGTAAAGATTACTCTTGCTCTTGGAAATTCAACATTCGGTGGTGGTTCGGGGCAAACGGTGGAAAATATCATAACTACTACTGATAGAACACTGCGACGAGCTCATATTTGTAAACTGTTGCAGGAGAATGTTCCATGGCAATCTGAGACAATTCCTTCCATAGCTGAGGCATTGGTTGATTCCAAATCAGCAAAGCAAAGTTCCACTACTTGGCTTTTATTACAAGGAACTGACTCTATTGGAAAAACAAGGTTGGCACGTGCCATTGCAGAATCAGTGTTTGGCTCAGTTGATTTTCTCCTTCACTTGGACATGCTGAAAAACAACAACAAAGAGAATTCAGCTGATATAGTGGCTGGAGCATTGAAAAGCCATGAAAAGGTTGTGGTTCTGATAGAAAGTTTGGATTTTGCAGATGCCCAGTTCAGGAAGTTTCTTGCAGATGGGTTTGAAACTGCAAAGTTTGGAAATTTAAGCATGAATGAGAAGAGTTCAGGCCAAGCAATATTCATATTGACCAATGGTGACACTAGGAGCAATGAAGAGAAGAAAACCAATAACTCAGTGATGAAGTTGGTGTTGCAGATAAGTGAAACCAAACCTAGTTTGGAGTCTTCATCACCTAGTTTGGGTCAGAAGAGAAGGGCTGAAGTACTGGATTTGTTTACCAATGTCAAGAGTCCAAGGGTTGAGGAGAAAGAGGAGGGTAAGAAAGTCTTTTCAAGGCATTCAAGCTTCAACAACCTTGACCTGAACATGAAAGCTGATGAAGAAGAGGATGATGATGGAAGTAGTCCAATATCAAGTGATTTGACAAGGGAAACAGTGGTTGATCAACTTGAGTTAATTGAGAACCGGTTTGAGTTTAATGAAGGTCCAGAGAGGGAGAGGGAGAGGGAGGTGACACAAATGTTTCTGTCAAGGATAAAAGAGTCTTTTGAGGAGGTATATGATGATGATAATGGTGATGGGGTGGTGGTGAATTTTACTGTAGAGGAGAGGGTGATAGAGGAAATTGGTGTGGGGTTTGGTAATTTTACTAACAGCATGTTTGAGAAATGGCTGAAAGACATTTTTCAAAGCAGTTTATTACAGACAGTTGTTAACTTTGGTGATGGGGGGAAGGAGAGGGGTATAGGTTTTACACTTTGTTGGGGTGGTAAAGGAGATAGGAAATCGGATAGTGATGGGTTCATGGGTTCATGTTTGCCCAAGAATGTCCAAGTTAACTACTTCATGGATTGA
Predicted protein sequences of Glyma09g06810
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma09g06810.2 sequence type=predicted peptide gene model=Glyma09g06810 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MRSGACTLQQTLTAEAASVLKHSLGLARRRGHAQVTPLHVAATLLTLRASSLRRACLKSQPQTQTHSHHPLQCRALELCFNVALNRLPTTPGPLLHTQPSLSNALIAALKRAQAHQRRGCIEQQQQQQQPPLLTIKVELEQLIISILDDPSVSRVMREAGFSSTVVKSNIEDTSSSAPSVFYNSSGGGVFSSPGSPSPSEKNNVFRQNHFLAAYTSNEFSSTSPNSSLLLKKASVFPIIESPPPSSSKEDIKVVFDVLLRKKKRNTVIVGDSLALTEGLVGELMGKLERGEVPDELKSTHFIKFQLASPVSLRFMKRDEVEMSLSALKRKVDSVVVSGGGGAIFYVGDLKWTVELGTSEKEEGGDVCGYNYYYNPVDHLVAEIGKLFCDSNNTTKVWLLATASYQTYMRCQMRQPPLETQWSLQAVPVPSGGLGLSLHASSVHDSKMTISQNPSNMMETKLFSSKKEEQDKLNCCEECASSYEKEAQLFKPGQKKLLPSWLQSHTTEAHQKDELAQLKRKWNRLCHCLHQSKQPQNHWSNTLHGNYHSSNGNKIYHYNSSYPWWPNQGTSVFTDSSSISFADSPPKPAYSSNNNIVPRFRRQQSCTIEFNFSDVTQKKPSTTALDSLKGMEGNNSSEVKITLALGNSTFGGGSGQTVENIITTTDRTLRRAHICKLLQENVPWQSETIPSIAEALVDSKSAKQSSTTWLLLQGTDSIGKTRLARAIAESVFGSVDFLLHLDMLKNNNKENSADIVAGALKSHEKVVVLIESLDFADAQFRKFLADGFETAKFGNLSMNEKSSGQAIFILTNGDTRSNEEKKTNNSVMKLVLQISETKPSLESSSPSLGQKRRAEVLDLFTNVKSPRVEEKEEGKKVFSRHSSFNNLDLNMKADEEEDDDGSSPISSDLTRETVVDQLELIENRFEFNEGPEREREREVTQMFLSRIKESFEEVYDDDNGDGVVVNFTVEERVIEEIGVGFGNFTNSMFEKWLKDIFQSSLLQTVVNFGDGGKERGIGFTLCWGGKGDRKSDSDGFMGSCLPKNVQVNYFMD*