SoyBase
SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research
SoyBase
SoyBase transitions to NEW site on 10/1/2024
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A newer version of this gene model can be found here:
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|---|---|---|---|---|
| AT1G30910 | AT | Annotation by Michelle Graham. TAIR10: Molybdenum cofactor sulfurase family protein | chr1:11000912-11002801 FORWARD LENGTH=318 | SoyBase | E_val: 6.00E-140 | ISS |
| GO:0009507 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: chloroplast | SoyBase | N/A | ISS |
| GO:0003824 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: catalytic activity | SoyBase | N/A | ISS |
| GO:0008265 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: Mo-molybdopterin cofactor sulfurase activity | SoyBase | N/A | ISS |
| GO:0030151 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: molybdenum ion binding | SoyBase | N/A | ISS |
| GO:0030170 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: pyridoxal phosphate binding | SoyBase | N/A | ISS |
| KOG2362 | KOG | Uncharacterized Fe-S protein | JGI | ISS | |
| PTHR14237 | Panther | MOLYBDOPTERIN COFACTOR SULFURASE (MOSC) | JGI | ISS | |
| PF03473 | PFAM | MOSC domain | JGI | ISS | |
| PF03476 | PFAM | MOSC N-terminal beta barrel domain | JGI | ISS | |
| UniRef100_G7INC8 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: MOSC domain-containing protein n=1 Tax=Medicago truncatula RepID=G7INC8_MEDTR | SoyBase | E_val: 3.00E-166 | ISS |
| UniRef100_I1L146 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=2 Tax=Glycine max RepID=I1L146_SOYBN | SoyBase | E_val: 0 | ISS |
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Glyma09g05530 not represented in the dataset |
Glyma09g05530 not represented in the dataset |
| Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|---|---|---|
| Glyma.09g050100 | Wm82.a2.v1 | IGC | As supplied by JGI |
| Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma09g05530.1 sequence type=CDS gene model=Glyma09g05530 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGTTACATGAAGAATGCAGTAAAAGTAACTCATTCATTGAGTGTGGTCACTTACAGAGCAGAGGAAGAATGGCAGATGGATCATCAACACCAGCAACACCTTCTGCCAAAGTTTCAGCCATCTTCATATACCCTATTAAATCATGCCGTGCAATTTCTGTTTCTCGTGCTCCTCTCACTCCTACTGGATTTCGATGGGATAGACAATGGATGGTGGTGAATTCCCAAGGGAGGATGTACACTCAAAGAGTTGAACCAAGGCTTGCTTTGGTTGAGGTTGAATTGCCATCTGAGGCATTTCTTGAAAACTGGGAACCTACACAAGACTCCTACATGGTGGTGAATGCACCTGGGATGCAACCTCTCAAAATATGTTTGAGCCAACAAGGGAAGGAGGTAGCAAATGCTGTCTCAGTATGGGAATGGACTGGATCTGCCTTGGATGAGGGAGCTGAAGCATCACAGTGGTTCTCAGATTATTTAGGAAAACCATGTCAACTGGTCCGCTTCAATTCAGCTTCTGAAGTTCGACCAGTGGATCCTGATTACGTCAAGGGACAACATCAGACCACATTTACTGATGGTTATCCATTCTTACTCGCGTCTCAGGAATCATTGGATGAACTAAACGAGCATCTAAAGGAGCCCGTTTCTATTAACCGATTTAGACCCAATATCCTCGTTGAAGGTTGTGAACCATATTCTGAGGACTTATGGACTGACATCAAGATAAGCAAGTTTTTATTTTCTGGTGTCAAACTGTGCTACCGTTGTAAGATACCTACAATCAATCAAGAGACTGCAATTGCTGCACCTGAACCAAATGAAACTCTCATGAAAACTAGGTCTGGAGAACTCATAAGACCAAATGATAAAAATAAAAAAAGGATCTACTTTGGTCAGAATATGACCTGGAACTGGATGGGATTTTCTGCTGAAGGGAGTGGTAAAATCATCAAAGTGGGAGATTCTGTTTATGTGCTTCAGAAGGTCTCTTCAACTGCTGAAGCAGCTGCTTGA
>Glyma09g05530.1 sequence type=predicted peptide gene model=Glyma09g05530 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MLHEECSKSNSFIECGHLQSRGRMADGSSTPATPSAKVSAIFIYPIKSCRAISVSRAPLTPTGFRWDRQWMVVNSQGRMYTQRVEPRLALVEVELPSEAFLENWEPTQDSYMVVNAPGMQPLKICLSQQGKEVANAVSVWEWTGSALDEGAEASQWFSDYLGKPCQLVRFNSASEVRPVDPDYVKGQHQTTFTDGYPFLLASQESLDELNEHLKEPVSINRFRPNILVEGCEPYSEDLWTDIKISKFLFSGVKLCYRCKIPTINQETAIAAPEPNETLMKTRSGELIRPNDKNKKRIYFGQNMTWNWMGFSAEGSGKIIKVGDSVYVLQKVSSTAEAAA*
| Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||
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