Glyma08g47191 - SoyBase

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Report for Sequence Feature Glyma08g47191

Feature Type:	gene_model
Chromosome:	Gm08
Start:	46114346
stop:	46115043
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma08g47191

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT4G32110	AT	Annotation by Michelle Graham. TAIR10: Beta-1,3-N-Acetylglucosaminyltransferase family protein \| chr4:15515769-15516408 REVERSE LENGTH=124	SoyBase	E_val: 8.00E-23	ISS
GO:0006486	GO-bp	Annotation by Michelle Graham. GO Biological Process: protein glycosylation	SoyBase	N/A	ISS
GO:0005576	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: extracellular region	SoyBase	N/A	ISS
GO:0016020	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: membrane	SoyBase	N/A	ISS
GO:0008378	GO-mf	Annotation by Michelle Graham. GO Molecular Function: galactosyltransferase activity	SoyBase	N/A	ISS
GO:0016757	GO-mf	Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring glycosyl groups	SoyBase	N/A	ISS
UniRef100_B9SNE6	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Transferase, transferring glycosyl groups, putative n=1 Tax=Ricinus communis RepID=B9SNE6_RICCO	SoyBase	E_val: 3.00E-25	ISS
UniRef100_I1MWZ6	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1MWZ6_SOYBN	SoyBase	E_val: 5.00E-55	ISS

Expression Patterns of Glyma08g47191

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma08g47191 not represented in the dataset	Glyma08g47191 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma08g47191 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.08g357100	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma08g47191

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma08g47191

Limit To All Plant Sequences

>Glyma08g47191.1   sequence type=CDS   gene model=Glyma08g47191   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGACTCATAATATCTTTAGCATAATTCTTTTCCTTGTTCTTATTTCTCAAGGTTATAGTCAATGTCTCTTGAGTGATATATCTGTAAGTCAAATTCAAACAGGAATTAAAGTGCAAGGAAAGCTAGAATGGAGTGTGACCATCACCAACAAGTGTCCATGTGTTCAAAAGAATGTGATATTAAATTGTACTGGATTCCAATCCATTGAACGCATAAATCCTTCTCTTTTGAGGGTCTCCCATGGACATTGTCTTGTTAATGCTGGCCAATCTATCTACGGAGATGCTATCAAATTTAAATATGCTTGGAACAAACAATTTCCATTAAAACCAATCTCCTCAGATATTTCTTGTTCTTAA

Predicted protein sequences of Glyma08g47191

Limit To All Plant Sequences

>Glyma08g47191.1   sequence type=predicted peptide   gene model=Glyma08g47191   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MTHNIFSIILFLVLISQGYSQCLLSDISVSQIQTGIKVQGKLEWSVTITNKCPCVQKNVILNCTGFQSIERINPSLLRVSHGHCLVNAGQSIYGDAIKFKYAWNKQFPLKPISSDISCS*

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