|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT3G07410 | AT | Annotation by Michelle Graham. TAIR10: RAB GTPase homolog A5B | chr3:2372485-2373482 REVERSE LENGTH=217 | SoyBase | E_val: 2.00E-123 | ISS |
GO:0007264 | GO-bp | Annotation by Michelle Graham. GO Biological Process: small GTPase mediated signal transduction | SoyBase | N/A | ISS |
GO:0009855 | GO-bp | Annotation by Michelle Graham. GO Biological Process: determination of bilateral symmetry | SoyBase | N/A | ISS |
GO:0009944 | GO-bp | Annotation by Michelle Graham. GO Biological Process: polarity specification of adaxial/abaxial axis | SoyBase | N/A | ISS |
GO:0010014 | GO-bp | Annotation by Michelle Graham. GO Biological Process: meristem initiation | SoyBase | N/A | ISS |
GO:0010075 | GO-bp | Annotation by Michelle Graham. GO Biological Process: regulation of meristem growth | SoyBase | N/A | ISS |
GO:0015031 | GO-bp | Annotation by Michelle Graham. GO Biological Process: protein transport | SoyBase | N/A | ISS |
GO:0005886 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane | SoyBase | N/A | ISS |
GO:0005525 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: GTP binding | SoyBase | N/A | ISS |
KOG0087 | KOG | GTPase Rab11/YPT3, small G protein superfamily | JGI | ISS | |
PTHR24073 | Panther | FAMILY NOT NAMED | JGI | ISS | |
PTHR24073:SF213 | Panther | SUBFAMILY NOT NAMED | JGI | ISS | |
PF00071 | PFAM | Ras family | JGI | ISS | |
UniRef100_G3ECQ7 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Rfls8 protein n=1 Tax=Glycine max RepID=G3ECQ7_SOYBN | SoyBase | E_val: 3.00E-152 | ISS |
UniRef100_G3ECQ7 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Rfls8 protein n=1 Tax=Glycine max RepID=G3ECQ7_SOYBN | SoyBase | E_val: 3.00E-152 | ISS |
Glyma08g45920 not represented in the dataset |
Glyma08g45920 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma.08g345300 | Wm82.a2.v1 | IGC | As supplied by JGI |
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma08g45920.1 sequence type=CDS gene model=Glyma08g45920 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGCGGAGAACGGTGAAGGCGGCGAGGAGTACCTGTTCAAGATAGTGCTGATTGGGGACTCCGCGGTGGGGAAGTCCAACCTCCTCTCGCGGTTCGCGCGGAACGAGTTCGATAGCAACTCCAAGGCCACCATTGGGGTCGAGTTCCAGACGCAGCTCGTCGAGATCGACGGCAAAGAGATCAAGGCGCAGATCTGGGACACTGCGGGACAAGAGAGGTTTCGAGCTGTCACCTCTGCTTACTACAGAGGCGCTGTTGGTGCGCTCGTTGTTTACGATATCAGCAGGAGGGGCACCTTCGACAGCATCAAGCGATGGCTCCAAGAACTCACTACTCAAAATGATAGCACCGTAGCAAGAATGTTGGTGGGAAATAAATGTGACTTGGAGAATATTAGAGAGGTGAGCACAGAAGAGGGCAAAAGTCTTGCAGAAGAAGAAGGTTTGTTCTTTATGGAGACATCTGCACTCGATGCTACCAATGTCCAAACAGCTTTTGAGATTGTTATCCGCGAAATTTACAACAACATCAGCCGTAAAGTCTTGAACTCTGACTCTTATAAGGCTGAGTTGTCTGTGAATCGAGTAAGCCTAGTTAATGGTGCAGGATCAAAGCAAGGTCCTTCTTGTTGTTCTCGATGA
>Glyma08g45920.1 sequence type=predicted peptide gene model=Glyma08g45920 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MAENGEGGEEYLFKIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQLVEIDGKEIKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRGTFDSIKRWLQELTTQNDSTVARMLVGNKCDLENIREVSTEEGKSLAEEEGLFFMETSALDATNVQTAFEIVIREIYNNISRKVLNSDSYKAELSVNRVSLVNGAGSKQGPSCCSR*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||