Report for Sequence Feature Glyma08g44670
Feature Type: gene_model
Chromosome: Gm08
Start: 44222518
stop: 44226054
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma08g44670
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT3G60450 AT
Annotation by Michelle Graham. TAIR10: Phosphoglycerate mutase family protein | chr3:22340982-22342187 FORWARD LENGTH=274
SoyBase E_val: 3.00E-95 ISS
GO:0008150 GO-bp
Annotation by Michelle Graham. GO Biological Process: biological process
SoyBase N/A ISS
GO:0009627 GO-bp
Annotation by Michelle Graham. GO Biological Process: systemic acquired resistance
SoyBase N/A ISS
GO:0034976 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to endoplasmic reticulum stress
SoyBase N/A ISS
GO:0005634 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: nucleus
SoyBase N/A ISS
GO:0005829 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: cytosol
SoyBase N/A ISS
KOG3734
KOG
Predicted phosphoglycerate mutase
JGI ISS
PTHR16469 Panther
FAMILY NOT NAMED
JGI ISS
PTHR16469:SF13 Panther
UNKNOWN PROTEIN
JGI ISS
PF00300 PFAM
Phosphoglycerate mutase family
JGI ISS
UniRef100_Q8LE79 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: PRIB5 protein n=1 Tax=Arabidopsis thaliana RepID=Q8LE79_ARATH
SoyBase E_val: 5.00E-92 ISS
UniRef100_UPI0002338F59 UniRef
Annotation by Michelle Graham. Best UniRef hit: UPI0002338F59 related cluster n=1 Tax=unknown RepID=UPI0002338F59
SoyBase E_val: 0 ISS
Expression Patterns of Glyma08g44670
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Gene model name correspondences to Glyma08g44670 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.08g339000 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma08g44670
Coding sequences of Glyma08g44670
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma08g44670.2 sequence type=CDS gene model=Glyma08g44670 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGCTTTCGTTACGGTTACTTCGCCTTTTCTCTGTTCGTTCTACTTGTTCTAACCAAGCTCCCATTCTGCAGGAAAGTTATAAGATTCTGTTTCAGGGGTGTAAAGAAACTGGCTTTCGATCATTATCTCCAGGTTCGGTGAAAATGAGTTCAGGAGGAAAGCAGGGGGGCTTCGTTTCGTACCAAAACGTCTTCGTAATGAGGCACGGGGAGCGTTTGGACAACTTCGAGCCGTCGTGGGTGATGACGGCGGCGCGGCCGTGGGACCCGCCGCTGGCAGAGGCAGGTAGAAAACGGGCGTTCGAAACGGGTCGGAGGCTCCGGGAGAGTGTCGGGCTTCCGATCGGGCGAGTCTTCGTTTCGCCGTTCCTCCGCTGCCTCCAGACCGCCGGGGAACTCGTGGCGTCTTTCTCCGATGAGGGTCGTGGTGGCACCGTCGCCGGCGATGGTGTTGCCGTTAAGCCTTTCGAAGTCAAGGTCTCTGTTGAGTATGGATTGTGTGAAATGATGAACAGCAAGGCTATACGTCCCAATGTGGCCCCTAAAGATGGAAATATGGGGTTTGATGTAGCAGTGTGTGAAGCCATGCTTCCAGCTGAAATAGTGGATAAAAATGTAGAAAGGGTGTATAAAGAGTTGCCCCAGTGGGAAGAATCAGTTCTGCAAGCAGGGGCAAGATATCAGCAGTTAATTAAGGACCTTGCAGATAAATATCCTACTGAGAACTTGCTGCTTGTTACACATGGGGAAGGAGTTCAGGTTGCTGTTTCTTCATTCAAAAAGGATGCTGAGGTAAATGAAGTGGATTACTGTGGATATGTGGAACTTAGACGTCCTATTTTCAAGAAAGATCACACATTTATCACTGGAGAGTTCGATTTACTCACTCCTAGTGGTCAAACTGGCGTAAGCTATTCCCTCCCACGTTCTTTGGAAAATGACACCAACCAAACAACGCCATGA
Predicted protein sequences of Glyma08g44670
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma08g44670.2 sequence type=predicted peptide gene model=Glyma08g44670 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MLSLRLLRLFSVRSTCSNQAPILQESYKILFQGCKETGFRSLSPGSVKMSSGGKQGGFVSYQNVFVMRHGERLDNFEPSWVMTAARPWDPPLAEAGRKRAFETGRRLRESVGLPIGRVFVSPFLRCLQTAGELVASFSDEGRGGTVAGDGVAVKPFEVKVSVEYGLCEMMNSKAIRPNVAPKDGNMGFDVAVCEAMLPAEIVDKNVERVYKELPQWEESVLQAGARYQQLIKDLADKYPTENLLLVTHGEGVQVAVSSFKKDAEVNEVDYCGYVELRRPIFKKDHTFITGEFDLLTPSGQTGVSYSLPRSLENDTNQTTP*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
