Glyma08g44550 - SoyBase

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Report for Sequence Feature Glyma08g44550

Feature Type:	gene_model
Chromosome:	Gm08
Start:	44135403
stop:	44136806
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma08g44550

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT4G27570	AT	Annotation by Michelle Graham. TAIR10: UDP-Glycosyltransferase superfamily protein \| chr4:13763657-13765018 REVERSE LENGTH=453	SoyBase	E_val: 3.00E-163	ISS
GO:0006499	GO-bp	Annotation by Michelle Graham. GO Biological Process: N-terminal protein myristoylation	SoyBase	N/A	ISS
GO:0008152	GO-bp	Annotation by Michelle Graham. GO Biological Process: metabolic process	SoyBase	N/A	ISS
GO:0005575	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: cellular component	SoyBase	N/A	ISS
GO:0016757	GO-mf	Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring glycosyl groups	SoyBase	N/A	ISS
GO:0016758	GO-mf	Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring hexosyl groups	SoyBase	N/A	ISS
KOG1192	KOG	UDP-glucuronosyl and UDP-glucosyl transferase	JGI		ISS
PTHR11926	Panther	GLUCOSYL/GLUCURONOSYL TRANSFERASES	JGI		ISS
PTHR11926:SF77	Panther	GLYCOSYLTRANSFERASE FAMILY PROTEIN	JGI		ISS
PF00201	PFAM	UDP-glucoronosyl and UDP-glucosyl transferase	JGI		ISS
UniRef100_G7IFH5	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Anthocyanidin 3-O-glucosyltransferase n=1 Tax=Medicago truncatula RepID=G7IFH5_MEDTR	SoyBase	E_val: 0	ISS
UniRef100_I1KYN2	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=2 Tax=Glycine max RepID=I1KYN2_SOYBN	SoyBase	E_val: 0	ISS

Expression Patterns of Glyma08g44550

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma08g44550 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.08g332500	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma08g44550

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma08g44550

Limit To All Plant Sequences

>Glyma08g44550.1   sequence type=CDS   gene model=Glyma08g44550   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGATGATGAGTAGCAACACCAGCTTATTTCATGTTGCAATGTATCCATGGTTTGCCCTAGGCCATCTTACATCATTCCTTCACATCTCCAACAAACTTGCCGAACGTGGCCACAAGATTTCATTCCTCATGCCCAAAAACACCATCCCCAGATTGAGCCATTTCAATCTCCACCCACATCTCATCTTCTTTGTTCCGATCACCGTTCCGCACGTCGACGGCCTCCCTCTCGGCTCCGAGACTACTTCAGACCTCCCCAATTACTCAAAGCACTCCCTTCTCATGACCGCAATGGACCTCACTGAGCCTGTTATTGAAACTTGTCTGAAACATCTTAAACCCCACATGGTCTTTTTTGACTTCACACATTGGTTACCTGCATTGGCATGCAAGTTAGGCATCAAGGCTTTGCATTACTGCACAATAAGCCCTGCCACTGTAGGGTATCTTATAAGCCCTGAAAGAAAACTTCTCCTTGAGAAGAATTCATTAACAGAAGCTGATCTCATAAACCCTCCACCAAGCTTTCCACCTTCATCAACCATAAGGCTACACCCTCACGAAGCAAGAGAGTTAGCCACTGCTGCTGTAAAGAACTACGGCAATGGGGGGATTTCATTTGTGGAGCGCCAATTGATCTCTTTTGCCAGCTGCCACGCCGTGGTTTTCAAAACCTGCAGAGAAATGGAAGGGCCCTATTGTGATTATCTTGAAAGACAAATGAGAAAGCAAGTGTTTTTGGCAGGACCGGTTTTGCCGGACACACCGTTAAGGTCGAAGCTGGAAGAAAAATGGGTGACTTGGCTGGGAAGTTTCAAGCCCAAAACAGTGATTTTCTGTGCCTTTGGAAGTGAATGCTTTTTGAAGAGTGATCAATTTAAGGAACTTTTGTTGGGTTTTGAACTCACAGGAATGCCTTTCCTGGCTGCATTAAAACCCCCTATTGGAGCTGAAGCAATAGAATCAGCTTTGCCTGAAGGGTTTAATGAGAGAACAAAGGGAAGAGGGGTGGTACATGGGGATTGGGTTCAGCAGCTATTGATCTTGAGTCACCCATCTGTGGGTTGCTTTGTGACTCATTGTGGGTCTGGGTCATTAACAGAGGCTATGGTAAATGAGTGTCAATTGGTACTGTTGCCCCATGCAGGAGATCAATTTATCAATGCAAGAATAATGAGTGGAGACTTGAAAGTGGGAGTGGAGGTTGAGAAAAGTGAAGATGGACTGTTTACTAGGGAAGCTGTGTGCAAGGTATTGAGAGCTGTGATGGACAGTGATAGTGAAGTGGGTCAAATGGTGAGAACCAATCATGCTAAATGGAGGAAGTTCTTGTTCAGTAAAGGGCTAGAAAACTCTTATGTGGACCATTTCAATCAGAACCTGCATAGTCTGCTCAGATCTTGA

Predicted protein sequences of Glyma08g44550

Limit To All Plant Sequences

>Glyma08g44550.1   sequence type=predicted peptide   gene model=Glyma08g44550   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MMMSSNTSLFHVAMYPWFALGHLTSFLHISNKLAERGHKISFLMPKNTIPRLSHFNLHPHLIFFVPITVPHVDGLPLGSETTSDLPNYSKHSLLMTAMDLTEPVIETCLKHLKPHMVFFDFTHWLPALACKLGIKALHYCTISPATVGYLISPERKLLLEKNSLTEADLINPPPSFPPSSTIRLHPHEARELATAAVKNYGNGGISFVERQLISFASCHAVVFKTCREMEGPYCDYLERQMRKQVFLAGPVLPDTPLRSKLEEKWVTWLGSFKPKTVIFCAFGSECFLKSDQFKELLLGFELTGMPFLAALKPPIGAEAIESALPEGFNERTKGRGVVHGDWVQQLLILSHPSVGCFVTHCGSGSLTEAMVNECQLVLLPHAGDQFINARIMSGDLKVGVEVEKSEDGLFTREAVCKVLRAVMDSDSEVGQMVRTNHAKWRKFLFSKGLENSYVDHFNQNLHSLLRS*

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