SoyBase
SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research
SoyBase
SoyBase transitions to NEW site on 10/1/2024
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A newer version of this gene model can be found here:
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|---|---|---|---|---|
| AT5G55380 | AT | Annotation by Michelle Graham. TAIR10: MBOAT (membrane bound O-acyl transferase) family protein | chr5:22446846-22447871 REVERSE LENGTH=341 | SoyBase | E_val: 5.00E-110 | ISS |
| GO:0008150 | GO-bp | Annotation by Michelle Graham. GO Biological Process: biological process | SoyBase | N/A | ISS |
| GO:0016746 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring acyl groups | SoyBase | N/A | ISS |
| PF03062 | PFAM | MBOAT family | JGI | ISS | |
| UniRef100_G7J050 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Annotation was added to scaffolds in November 2011 Long-chain-alcohol O-fatty-acyltransferase n=1 Tax=Medicago truncatula RepID=G7J050_MEDTR | SoyBase | E_val: 1.00E-161 | ISS |
| UniRef100_I1KYE5 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1KYE5_SOYBN | SoyBase | E_val: 0 | ISS |
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Glyma08g43550 not represented in the dataset |
Glyma08g43550 not represented in the dataset |
| Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|---|---|---|
| Glyma.08g323400 | Wm82.a2.v1 | IGC | As supplied by JGI |
| Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma08g43550.1 sequence type=CDS gene model=Glyma08g43550 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGATGATGAAATTGAAAGGTTCATCAAAGTATGGATTTCAGCAATCTTATGTCTATGTTATTGTTATTACATAGCTTCAAGAATACCAAAGGGCTTCTTGAGACTTCTCTCCCTCCTTCCAATTCTCTACCTCTTCATCACCCTTCCCTTGAAACTCTCTTCACCCACCTTAGTTGGATACACTTCCTTCTTCATTTCTTGGCTTGGCACTTTCAAGCTCTTCCTTTTCTCCTTCAACCAAGGCCCTCTTGCCCTATCACCCCCAAACATTGTTCAATTCATCTCCATTGCTTCCCTTCCCATCACCCCCAAACAAAACCCATCAACCAATGAAAAAAACACCACCAACAAACCCAAATGGCTTTTGTTCCTAAAAGTTCTTATTTTTGTAATGATCTTAGGTGTTTATAACTACAAAGAAACCTTGCATCCTGATTTCTTGTTAGTCATTTATTGCTGCCACGTGTACCTTGCCTTAGAGCTTATGTTAGTCCTTGTTGGAGCCACTGTTCAAACCCTTTTTGGTTTTGAGATAGAACCTCAATTCAACGAACCCTACCTTTGTACATCTCTTCAAGACTTTTGGGGTCGTAGATGGAACCTCACGGTTACTCATATTCTACGGCCCACCGTATACGACCCTATACGCCGTATGTCTACGAGTTTTGTCGGCCCCTTGTGTGCCACGTCAGCTGCCATGTTGGCCACGTTCCTTGTGTCCGGGCTTGTGCACGAGTTATTATATTATTACCTTACACGTGTGCCTCCCACGTGGGAGGTTACGTGTTTTTTTGTGCTTCACGGTGTGTGTATGGTAGTGGAGGTGGCTGTGAAGAAGGTGGCTCTCCGTCGTGGGTGGCAGCTGCACCGTGCTGTGTCGGGGCCGCTCGTGGTGGCGCTTTTGGCGGTCACCGCGAATTGGCTGTTTTTTCCTCAACTGTTGAGGAATGGTTTGGATAGGAAGTCCATTGAGGAGTATGCTATTTTGGTGGATTTTGTTAAGTCAAAGTTACCATTTAAGAATGTTTAA
>Glyma08g43550.1 sequence type=predicted peptide gene model=Glyma08g43550 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MDDEIERFIKVWISAILCLCYCYYIASRIPKGFLRLLSLLPILYLFITLPLKLSSPTLVGYTSFFISWLGTFKLFLFSFNQGPLALSPPNIVQFISIASLPITPKQNPSTNEKNTTNKPKWLLFLKVLIFVMILGVYNYKETLHPDFLLVIYCCHVYLALELMLVLVGATVQTLFGFEIEPQFNEPYLCTSLQDFWGRRWNLTVTHILRPTVYDPIRRMSTSFVGPLCATSAAMLATFLVSGLVHELLYYYLTRVPPTWEVTCFFVLHGVCMVVEVAVKKVALRRGWQLHRAVSGPLVVALLAVTANWLFFPQLLRNGLDRKSIEEYAILVDFVKSKLPFKNV*
| Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||
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