|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT5G40710 | AT | Annotation by Michelle Graham. TAIR10: zinc finger (C2H2 type) family protein | chr5:16295091-16296810 FORWARD LENGTH=272 | SoyBase | E_val: 9.00E-106 | ISS |
GO:0008150 | GO-bp | Annotation by Michelle Graham. GO Biological Process: biological process | SoyBase | N/A | ISS |
GO:0005622 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: intracellular | SoyBase | N/A | ISS |
GO:0005739 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: mitochondrion | SoyBase | N/A | ISS |
GO:0003676 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: nucleic acid binding | SoyBase | N/A | ISS |
GO:0008270 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: zinc ion binding | SoyBase | N/A | ISS |
PTHR21385 | Panther | ZINC FINGER PROTEIN-RELATED | JGI | ISS | |
UniRef100_D9ZIT9 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: C2H2L domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZIT9_MALDO | SoyBase | E_val: 4.00E-119 | ISS |
UniRef100_I1KYA5 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1KYA5_SOYBN | SoyBase | E_val: 0 | ISS |
Glyma08g43130 not represented in the dataset |
Glyma08g43130 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma.08g319000 | Wm82.a2.v1 | IGC | As supplied by JGI |
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma08g43130.1 sequence type=CDS gene model=Glyma08g43130 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGAAGAAGATGTGGGTTTCGGATCATAGGTTGTTTCTTCTCTGCATTCTTTGTGGCCTCTGTTTTTGTCTGCAGTTCACAACGGGTCATGCAGGTTCAAATGCTGGAAGAACTTTGAATCAGGAGGGTGGTGATCATCAAATACATTGCTCTAGAGAAAGAAGTAGAACAGCTTGGAAGATCATTCAAGAGTATTTGATGCCATTTGTGGAGAAAGAAAAATACCACATCTCAAAAAGGTGTATGCTTCACCCTGACAATGACATATACAGAGATCAGGAGCAACATAAGTCTCATATAGATATAAACGAATGGCAGTGTAGGTACTGTAAGAAAAGTTTCTATGAAGAGAAACATCTTGATCAGCATTTTGACAACAGACACTCCAATTTGCTTAATTTGAGTGAAAGCCAGTGCTTAGCAGATGTTTGTGGTGCTCTGCACTGTGACCATGAAATGAATTCTGGATCTAAAAAATCAAAGTGCAATCCTGCTGCTGCTGCAAAACATAAACATCTATGTGAGAGCTTAGCCGATAGTTGTTTTCCTGTCAGTGATGGCCCTGCAGCAAGCCAACTTCATGAATTCTTCTTGCACCAATTCTGTGATGCACACAGCTGCACTGGAAGTAGGAAACCTTTCTCCAGAGGGCACAGGAAGAAGACAAATGTGTTCTACATCTTTGTGTCTATTTTGCTTGTGATACTGCTGCTACTATACTATCTCTACATTTACTTATATCAGAGAGGAATGAAAAGAGAAACTCAAGTGCTGAAGCGCATCTCACAAGCCAGCAGAAAGAAAAAGCCATCTTAA
>Glyma08g43130.1 sequence type=predicted peptide gene model=Glyma08g43130 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MKKMWVSDHRLFLLCILCGLCFCLQFTTGHAGSNAGRTLNQEGGDHQIHCSRERSRTAWKIIQEYLMPFVEKEKYHISKRCMLHPDNDIYRDQEQHKSHIDINEWQCRYCKKSFYEEKHLDQHFDNRHSNLLNLSESQCLADVCGALHCDHEMNSGSKKSKCNPAAAAKHKHLCESLADSCFPVSDGPAASQLHEFFLHQFCDAHSCTGSRKPFSRGHRKKTNVFYIFVSILLVILLLLYYLYIYLYQRGMKRETQVLKRISQASRKKKPS*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||