Report for Sequence Feature Glyma08g42670
Feature Type: gene_model
Chromosome: Gm08
Start: 42646560
stop: 42650850
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma08g42670
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT3G20500 AT
Annotation by Michelle Graham. TAIR10: purple acid phosphatase 18 | chr3:7157926-7160244 FORWARD LENGTH=437
SoyBase E_val: 0 ISS
GO:0015824 GO-bp
Annotation by Michelle Graham. GO Biological Process: proline transport
SoyBase N/A ISS
GO:0005576 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: extracellular region
SoyBase N/A ISS
GO:0003993 GO-mf
Annotation by Michelle Graham. GO Molecular Function: acid phosphatase activity
SoyBase N/A ISS
GO:0004722 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein serine/threonine phosphatase activity
SoyBase N/A ISS
GO:0016787 GO-mf
Annotation by Michelle Graham. GO Molecular Function: hydrolase activity
SoyBase N/A ISS
GO:0046872 GO-mf
Annotation by Michelle Graham. GO Molecular Function: metal ion binding
SoyBase N/A ISS
KOG1378
KOG
Purple acid phosphatase
JGI ISS
PTHR22953 Panther
ACID PHOSPHATASE RELATED
JGI ISS
PF00149 PFAM
Calcineurin-like phosphoesterase
JGI ISS
UniRef100_G0T427 UniRef
Annotation by Michelle Graham. Best UniRef hit: Phytase n=2 Tax=Glycine max RepID=G0T427_SOYBN
SoyBase E_val: 0 ISS
UniRef100_G0T427 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Phytase n=2 Tax=Glycine max RepID=G0T427_SOYBN
SoyBase E_val: 0 ISS
Proteins Associated with Glyma08g42670
Locus Gene Symbol Protein Name
PAP18 Purple acid phosphatase 18 gene
PAP18 Purple acid phosphatase gene 18
Expression Patterns of Glyma08g42670
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Gene model name correspondences to Glyma08g42670 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.08g314800 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma08g42670
Coding sequences of Glyma08g42670
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma08g42670.1 sequence type=CDS gene model=Glyma08g42670 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGCTGATGATAATAGATTCTCCTGAACTTGAAGTACATTGTTGTCGTGCTGCTGATCCAACGTTTGCAGAGGTTTCTGTTGTGTTCACAGTTCACACACAAATGGAACTGAAACTACTTCTAATAACGGTTTTAATGATGGTGTCACTTTCTGCAACTGCAGCAGCTGATTACATTCGACCTCAGCCTCGAAAAACCTTCCATCTCCCATGGCATTCTAAACCCTCCTCTTACCCTCAACAGGTACACATTTCTTTAGCAGGAGAACAGCACATGAGAGTTACCTGGATTACTGATGATAACTCTGCACCTTCAATTGTAGAATATGGAACATCACCAGGGCGATATGACTCTGTAGCTGAAGGAGAAACCACCTCTTACAGTTATCTGTTGTATAGCTCAGGAAAGATACACCATACTGTAATTGGGCCTTTAGAGCATAATTCTGTGTACTATTACCGATGTGGTGGACAAGGTCCTCAGTTCCAGCTCAGAACTCCTCCAGCTCAACTTCCAATCACTTTTGCCGTGGCTGGTGATTTGGGTCAAACCGGATGGACTAAATCAACATTGGATCACATTGACCAATGTAAATATAATGTTCACCTGCTTCCGGGAGACCTTTCATATGCTGATTATATCCAGCATCGCTGGGACTCGTTTGGTAGGCTAGTGCAGCCACTTGCTAGTGCTAGACCATGGATGGTAACACAAGGAAACCATGAAGTAGAGAGCATACCTTTGTTAAAGGATGGGTTTTTGTCCTATAATTCCAGATGGAAAATGCCATTTGAGGAAAGCGGATCAAATTCAAATCTCTATTATTCGTTTGAAGTTGCAGGTGTTCACATTATCATGCTTGGGTCCTATGCAGATTATGATGAGTACTCTGAACAATATGGATGGCTAAAGGAAGATCTGTCAAAGGTGGATAGGGAAAGGACACCTTGGTTGATTGTGTTATTTCATGTACCATGGTATAATAGTAACACAGCTCATCAAGGTGAAGGGGCTGATATGATGGCATCTATGGAGCCATTGCTTTATGCTGCTAGCGCCGATTTAGTTCTTGCCGGTCATGTGCATGCTTATGAACGCTCAAAACGTGTATACAATAAAAGACTTGATCCTTGTGGTTCAGTCCATATAACCATCGGTGATGGAGGAAACAAAGAAGGTTTAGCTCCTAAGTATATAAATCCACAGCCAATATGGTCAGAATTCCGTGAAGCCAGTTTTGGTCATGGTGAGCTACAGATTGTAAACTCTACGCATGCTTTCTGGAGTTGGCACAGGAATGATGATGATGAGCCAGTAAAATCCGATGATATCTGGATAACATCTTTGACCAGCTCAGGATGTGTTGATCAGAAGAGAAATGAACTCAGGAATAAACTTATGACACCTTAA
Predicted protein sequences of Glyma08g42670
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma08g42670.1 sequence type=predicted peptide gene model=Glyma08g42670 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MLMIIDSPELEVHCCRAADPTFAEVSVVFTVHTQMELKLLLITVLMMVSLSATAAADYIRPQPRKTFHLPWHSKPSSYPQQVHISLAGEQHMRVTWITDDNSAPSIVEYGTSPGRYDSVAEGETTSYSYLLYSSGKIHHTVIGPLEHNSVYYYRCGGQGPQFQLRTPPAQLPITFAVAGDLGQTGWTKSTLDHIDQCKYNVHLLPGDLSYADYIQHRWDSFGRLVQPLASARPWMVTQGNHEVESIPLLKDGFLSYNSRWKMPFEESGSNSNLYYSFEVAGVHIIMLGSYADYDEYSEQYGWLKEDLSKVDRERTPWLIVLFHVPWYNSNTAHQGEGADMMASMEPLLYAASADLVLAGHVHAYERSKRVYNKRLDPCGSVHITIGDGGNKEGLAPKYINPQPIWSEFREASFGHGELQIVNSTHAFWSWHRNDDDEPVKSDDIWITSLTSSGCVDQKRNELRNKLMTP*