Glyma08g37890 - SoyBase

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Report for Sequence Feature Glyma08g37890

Feature Type:	gene_model
Chromosome:	Gm08
Start:	36706715
stop:	36707037
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma08g37890

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT2G31350	AT	Annotation by Michelle Graham. TAIR10: glyoxalase 2-5 \| chr2:13368451-13370802 FORWARD LENGTH=323	SoyBase	E_val: 2.00E-32	ISS
GO:0019243	GO-bp	Annotation by Michelle Graham. GO Biological Process: methylglyoxal catabolic process to D-lactate	SoyBase	N/A	ISS
GO:0005739	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: mitochondrion	SoyBase	N/A	ISS
GO:0009507	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: chloroplast	SoyBase	N/A	ISS
GO:0004416	GO-mf	Annotation by Michelle Graham. GO Molecular Function: hydroxyacylglutathione hydrolase activity	SoyBase	N/A	ISS
GO:0005506	GO-mf	Annotation by Michelle Graham. GO Molecular Function: iron ion binding	SoyBase	N/A	ISS
GO:0008270	GO-mf	Annotation by Michelle Graham. GO Molecular Function: zinc ion binding	SoyBase	N/A	ISS
GO:0016787	GO-mf	Annotation by Michelle Graham. GO Molecular Function: hydrolase activity	SoyBase	N/A	ISS
PTHR11935	Panther	BETA LACTAMASE DOMAIN	JGI		ISS
PTHR11935:SF7	Panther	GLYOXYLASE-RELATED	JGI		ISS
UniRef100_G7IS04	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Hydroxyacylglutathione hydrolase n=1 Tax=Medicago truncatula RepID=G7IS04_MEDTR	SoyBase	E_val: 5.00E-32	ISS
UniRef100_I1MD50	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1MD50_SOYBN	SoyBase	E_val: 5.00E-37	ISS

Expression Patterns of Glyma08g37890

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma08g37890 not represented in the dataset	Glyma08g37890 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma08g37890 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments

References for Glyma08g37890

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma08g37890

Limit To All Plant Sequences

>Glyma08g37890.1   sequence type=CDS   gene model=Glyma08g37890   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
AAAAGGATTCCTGCCATTGATATCCACTTGAACCATGGCGATAAGTGGATGTTTGCTGGCCATGAGGTGCGTGTAATGGACACTCCTGGCCATATAAGCTTCTATTTTCCTGGATCTGGGGCAATTTTTACCGGAGACACTTTTTTCAGCTTATCATGTGGCAAGCTCTTTGAAGGAACCCCACAGCAGGTT

Predicted protein sequences of Glyma08g37890

Limit To All Plant Sequences

>Glyma08g37890.1   sequence type=predicted peptide   gene model=Glyma08g37890   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
KRIPAIDIHLNHGDKWMFAGHEVRVMDTPGHISFYFPGSGAIFTGDTFFSLSCGKLFEGTPQQV

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