Glyma08g37431 - SoyBase

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Report for Sequence Feature Glyma08g37431

Feature Type:	gene_model
Chromosome:	Gm08
Start:	36050112
stop:	36053929
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma08g37431

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT4G39330	AT	Annotation by Michelle Graham. TAIR10: cinnamyl alcohol dehydrogenase 9 \| chr4:18291268-18292772 FORWARD LENGTH=360	SoyBase	E_val: 2.00E-41	ISS
GO:0009809	GO-bp	Annotation by Michelle Graham. GO Biological Process: lignin biosynthetic process	SoyBase	N/A	ISS
GO:0055114	GO-bp	Annotation by Michelle Graham. GO Biological Process: oxidation-reduction process	SoyBase	N/A	ISS
GO:0005737	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm	SoyBase	N/A	ISS
GO:0048046	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: apoplast	SoyBase	N/A	ISS
GO:0000166	GO-mf	Annotation by Michelle Graham. GO Molecular Function: nucleotide binding	SoyBase	N/A	ISS
GO:0008270	GO-mf	Annotation by Michelle Graham. GO Molecular Function: zinc ion binding	SoyBase	N/A	ISS
GO:0016491	GO-mf	Annotation by Michelle Graham. GO Molecular Function: oxidoreductase activity	SoyBase	N/A	ISS
GO:0016747	GO-mf	Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring acyl groups other than amino-acyl groups	SoyBase	N/A	ISS
GO:0045551	GO-mf	Annotation by Michelle Graham. GO Molecular Function: cinnamyl-alcohol dehydrogenase activity	SoyBase	N/A	ISS
PTHR11695	Panther	ALCOHOL DEHYDROGENASE RELATED	JGI		ISS
PTHR11695:SF285	Panther	QUINONE OXIDOREDUCTASE-RELATED	JGI		ISS
PF08240	PFAM	Alcohol dehydrogenase GroES-like domain	JGI		ISS
UniRef100_G7KGI5	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Cinnamyl alcohol dehydrogenase n=1 Tax=Medicago truncatula RepID=G7KGI5_MEDTR	SoyBase	E_val: 5.00E-88	ISS
UniRef100_UPI0002338242	UniRef	Annotation by Michelle Graham. Best UniRef hit: UPI0002338242 related cluster n=1 Tax=unknown RepID=UPI0002338242	SoyBase	E_val: 4.00E-126	ISS

Expression Patterns of Glyma08g37431

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma08g37431 not represented in the dataset	Glyma08g37431 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma08g37431 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments

References for Glyma08g37431

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma08g37431

Limit To All Plant Sequences

>Glyma08g37431.1   sequence type=CDS   gene model=Glyma08g37431   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGCAGTTCCACCAGAAATGGAGCATCCCAGGAAGGCTTTTGGATGGACAGCTAGAGACACATCTGGGGTTCTCTCCCCTTTCAAGTTCTCAAGAAGGGAAACAGGAGAGAAAGATGTAGCATTCAAAGTATTGTACTGTGCTATATGTCACTCGGACCTCCATATGTTGAAGAACGAATGGGGCATTTCCACTTATCCTCTAGTACCCGGGCACGAGATTGCAGGTGAAGTAACAGAGGTAGGAAGCAAGGTACGGAACTTCAAAGTAGGAGACAAGGCTGCAATGGGCACCTTGGATGGTATAATAGACACAGTTTCTGCCATCCATCCTCTGCCCCCTCTGTTAGGTATGTTGAAGTCTCAAGGGAAACTCGTCATGGTTGGTTTACCAGAGAAGCCTCTAGAGCTACCAATCTTCCCTTTACTTGCAGGTATGGGGAAAGATAATAGCTGGGTCATTGGAGGAATTAAGGAGACACAAGAAATGATTGATTTTGTAACTAAACATGATGTAAAGCCTGACATTGAAATTATTCCTATAGATTATGTGAACACGGCATTGGAATGCCTCCTCAAAGCATATGTAAAATATCGATTTCTTATTGACATTGGGAACACACTAAAACCAATCTCTTAA

Predicted protein sequences of Glyma08g37431

Limit To All Plant Sequences

>Glyma08g37431.1   sequence type=predicted peptide   gene model=Glyma08g37431   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MAVPPEMEHPRKAFGWTARDTSGVLSPFKFSRRETGEKDVAFKVLYCAICHSDLHMLKNEWGISTYPLVPGHEIAGEVTEVGSKVRNFKVGDKAAMGTLDGIIDTVSAIHPLPPLLGMLKSQGKLVMVGLPEKPLELPIFPLLAGMGKDNSWVIGGIKETQEMIDFVTKHDVKPDIEIIPIDYVNTALECLLKAYVKYRFLIDIGNTLKPIS*

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