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Report for Sequence Feature Glyma08g37340

Feature Type:gene_model
Chromosome:Gm08
Start:35791980
stop:35792825
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G10530AT Annotation by Michelle Graham. TAIR10: Concanavalin A-like lectin protein kinase family protein | chr5:3324978-3326933 REVERSE LENGTH=651 SoyBaseE_val: 5.00E-37ISS
GO:0006468GO-bp Annotation by Michelle Graham. GO Biological Process: protein phosphorylation SoyBaseN/AISS
GO:0005886GO-cc Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane SoyBaseN/AISS
GO:0004672GO-mf Annotation by Michelle Graham. GO Molecular Function: protein kinase activity SoyBaseN/AISS
GO:0004674GO-mf Annotation by Michelle Graham. GO Molecular Function: protein serine/threonine kinase activity SoyBaseN/AISS
GO:0005524GO-mf Annotation by Michelle Graham. GO Molecular Function: ATP binding SoyBaseN/AISS
GO:0016301GO-mf Annotation by Michelle Graham. GO Molecular Function: kinase activity SoyBaseN/AISS
GO:0016772GO-mf Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring phosphorus-containing groups SoyBaseN/AISS
PF00139PFAM Legume lectin domain JGI ISS
UniRef100_A9YWS6UniRef Annotation by Michelle Graham. Most informative UniRef hit: Lectin n=1 Tax=Medicago truncatula RepID=A9YWS6_MEDTR SoyBaseE_val: 1.00E-73ISS
UniRef100_I1KX49UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1KX49_SOYBN SoyBaseE_val: 0ISS

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection
Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Corresponding NameAnnotation VersionEvidenceComments
Glyma.08g275000 Wm82.a2.v1IGC As supplied by JGI

Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

>Glyma08g37340.1   sequence type=CDS   gene model=Glyma08g37340   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGCTAAAAGTAAAACACAAACTCCATTCCCTACTCTCTTGGTTTTCCTCTGTTATGTGTTGCTACTCAACAATGTGAAGAAGTCCAATTCACTTTCATTCAACTTTTCCAATTTCGTGTCGGGACCAAACTTCGACATTGGTTTCCTTGGCGATGCGCGTCCATTAGACGGTGCAATACAATTGACAAGAAGAGACAATAACGGACCTTATGGCACTGCCAATATTCGCCAGCACAGTGTTGGTCGTGCAGTTTATATTCCACCAGTGCGCCTTTGGGACAAAACCACAGGCAAACTCGCAGACTTCGAAACAGACTTCTCCTTCGTCGTAGATTATTATTCCGCTGGTTCGCAAATCCACGCTGATGGCCTGTCCTTTTTCATCATACCTTTCGGTGCTGACCCCAGAATCCCCAAGAACTCATCTGGGGGATACCTTGGACTATTCAGCCCCGAAACTGCTTTCAATGCTTACAAAAACCAAATCGTGGCTGTTGAGTTTGACAGCTTCAGAAATGAATGGGATCCCGAGCCTGTCCCGGTTGCTCCTCATATCGGAATTGACATCAACTCTCTTGAATCGGTGGAAACTACAGATTGGCCTATCAATTCTGTGCCTCAAGGTGCTGTTGGAAAAGCTATCATTAGCTATGATTCTAATGCTAAAAAACTGTATGTCGCCGTTGGCTATGATACCCAACCTCCTACTATTGTTGCCCTCTCACAAACCATTGATTTGAGGGTTGTTCTACCGGAATGGGTAAGAATTGGTTTCTCGGGTGCCACTGGTGATATGGTTGAAACACATGACATTCTTTCTTGGTCTTTCACTTCACACATCTAG

>Glyma08g37340.1   sequence type=predicted peptide   gene model=Glyma08g37340   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MAKSKTQTPFPTLLVFLCYVLLLNNVKKSNSLSFNFSNFVSGPNFDIGFLGDARPLDGAIQLTRRDNNGPYGTANIRQHSVGRAVYIPPVRLWDKTTGKLADFETDFSFVVDYYSAGSQIHADGLSFFIIPFGADPRIPKNSSGGYLGLFSPETAFNAYKNQIVAVEFDSFRNEWDPEPVPVAPHIGIDINSLESVETTDWPINSVPQGAVGKAIISYDSNAKKLYVAVGYDTQPPTIVALSQTIDLRVVLPEWVRIGFSGATGDMVETHDILSWSFTSHI*







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