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Report for Sequence Feature Glyma08g36190

Feature Type:gene_model
Chromosome:Gm08
Start:33892126
stop:33893126
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma08g36190
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G18220AT Annotation by Michelle Graham. TAIR10: Drug/metabolite transporter superfamily protein | chr4:10078768-10080109 FORWARD LENGTH=344 SoyBaseE_val: 2.00E-106ISS
GO:0015931GO-bp Annotation by Michelle Graham. GO Biological Process: nucleobase-containing compound transport SoyBaseN/AISS
GO:0005345GO-mf Annotation by Michelle Graham. GO Molecular Function: purine nucleobase transmembrane transporter activity SoyBaseN/AISS
PF03151PFAM Triose-phosphate Transporter family JGI ISS
UniRef100_C6T847UniRef Annotation by Michelle Graham. Best UniRef hit: Putative uncharacterized protein n=1 Tax=Glycine max RepID=C6T847_SOYBN SoyBaseE_val: 0ISS
UniRef100_O49726UniRef Annotation by Michelle Graham. Most informative UniRef hit: Probable purine permease 9 n=1 Tax=Arabidopsis thaliana RepID=PUP9_ARATH SoyBaseE_val: 4.00E-108ISS

Expression Patterns of Glyma08g36190
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma08g36190 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.08g268500 Wm82.a2.v1IGC As supplied by JGI

References for Glyma08g36190
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma08g36190
>Glyma08g36190.2   sequence type=CDS   gene model=Glyma08g36190   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAATGAGTCAACAATAAGTAACAAAAAAAGATACTACCATTGGCTCATAATAGCCATCCATTCTTCACTTGTGTTGGTGTGTGCATCAGCAACAATAATCCTCAGAAGATTGTACTATGAAAAGGGTGGAAAAAGCAAATGGATGGGAACACTTGTTCAACTTGCTGGTTTCCCAATTCAGCTTCCTGTTTACTTCTTTTTAGCACCCAAAAATCTCACCACAAATAATAGCATTCATCCAAAACAACCATCAGTTTCAATGCTATCATTTATCTATGTCTCAATTGGCCTACTCGTGGCATTAGATCGTTATTTATATTCAGTTGGACTATGGTACCTTCCTGTTTCTACCTATTCACTCATTTGCTCATCCCAGTTGGCTTTCAATGCTTTCTTCTCCTACTTCCTCAACTCACTCAAGTTCACACCTTACATAATCAACTCTCTAGTCCTTCTCACCATTTCCTCAACCCTTCTTGTGTATCAAAATGAGTCATCATTAGATGATGATGATGATTCAGATTCCACAAAAATCTCCAAGAAAAAGTATGTGATTGGATTCATATGCACAATTGGTGCATTTGCAGGGTATGGACTATGGCTTTCCATTACACAACTTGTGTTCAAGAAGGTCATAAAAAGAGAAACTTTCAAAGTGGTCTTGGATATGATATCATACCCTTCCCTTGTAGCTACCCTTGTTACCTTAGTAAGACTTTTTGCTAGTGGAGAGTGGAGTGGTTTGAAAGATGAAATGAAGGGGTATGAGATGCGAAAGGCTTCATATTTGTTGAACCACACTTTCACTGCCATACTTTGGCAAGTTTCTTCACTCTTCTCTAATGCCATAAGCGCTTTGGGAGTGTCTATTGTTCCAATGTTGGCAGTGTTGTTCTTTCATGACAAAATGGATGGCATTAAGGGTATCTCTATGGTGCTAGCTATTTGGGGCATTGTATAA
Predicted protein sequences of Glyma08g36190
>Glyma08g36190.2   sequence type=predicted peptide   gene model=Glyma08g36190   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MNESTISNKKRYYHWLIIAIHSSLVLVCASATIILRRLYYEKGGKSKWMGTLVQLAGFPIQLPVYFFLAPKNLTTNNSIHPKQPSVSMLSFIYVSIGLLVALDRYLYSVGLWYLPVSTYSLICSSQLAFNAFFSYFLNSLKFTPYIINSLVLLTISSTLLVYQNESSLDDDDDSDSTKISKKKYVIGFICTIGAFAGYGLWLSITQLVFKKVIKRETFKVVLDMISYPSLVATLVTLVRLFASGEWSGLKDEMKGYEMRKASYLLNHTFTAILWQVSSLFSNAISALGVSIVPMLAVLFFHDKMDGIKGISMVLAIWGIV*






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