|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT5G52100 | AT | Annotation by Michelle Graham. TAIR10: Dihydrodipicolinate reductase, bacterial/plant | chr5:21170203-21172107 FORWARD LENGTH=298 | SoyBase | E_val: 9.00E-50 | ISS |
GO:0009089 | GO-bp | Annotation by Michelle Graham. GO Biological Process: lysine biosynthetic process via diaminopimelate | SoyBase | N/A | ISS |
GO:0009773 | GO-bp | Annotation by Michelle Graham. GO Biological Process: photosynthetic electron transport in photosystem I | SoyBase | N/A | ISS |
GO:0009965 | GO-bp | Annotation by Michelle Graham. GO Biological Process: leaf morphogenesis | SoyBase | N/A | ISS |
GO:0010103 | GO-bp | Annotation by Michelle Graham. GO Biological Process: stomatal complex morphogenesis | SoyBase | N/A | ISS |
GO:0010207 | GO-bp | Annotation by Michelle Graham. GO Biological Process: photosystem II assembly | SoyBase | N/A | ISS |
GO:0016556 | GO-bp | Annotation by Michelle Graham. GO Biological Process: mRNA modification | SoyBase | N/A | ISS |
GO:0019684 | GO-bp | Annotation by Michelle Graham. GO Biological Process: photosynthesis, light reaction | SoyBase | N/A | ISS |
GO:0030154 | GO-bp | Annotation by Michelle Graham. GO Biological Process: cell differentiation | SoyBase | N/A | ISS |
GO:0042742 | GO-bp | Annotation by Michelle Graham. GO Biological Process: defense response to bacterium | SoyBase | N/A | ISS |
GO:0045893 | GO-bp | Annotation by Michelle Graham. GO Biological Process: positive regulation of transcription, DNA-dependent | SoyBase | N/A | ISS |
GO:0055114 | GO-bp | Annotation by Michelle Graham. GO Biological Process: oxidation-reduction process | SoyBase | N/A | ISS |
GO:0009507 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: chloroplast | SoyBase | N/A | ISS |
GO:0009570 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: chloroplast stroma | SoyBase | N/A | ISS |
GO:0000166 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: nucleotide binding | SoyBase | N/A | ISS |
GO:0008839 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: dihydrodipicolinate reductase activity | SoyBase | N/A | ISS |
GO:0070402 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: NADPH binding | SoyBase | N/A | ISS |
PTHR20836 | Panther | DIHYDRODIPICOLINATE REDUCTASE | JGI | ISS | |
PF05173 | PFAM | Dihydrodipicolinate reductase, C-terminus | JGI | ISS | |
UniRef100_G7IAQ3 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Dihydrodipicolinate reductase n=1 Tax=Medicago truncatula RepID=G7IAQ3_MEDTR | SoyBase | E_val: 2.00E-53 | ISS |
UniRef100_I1LDU7 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1LDU7_SOYBN | SoyBase | E_val: 5.00E-59 | ISS |
Glyma08g36136 not represented in the dataset |
Glyma08g36136 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma.08g268200 | Wm82.a2.v1 | IGC | As supplied by JGI |
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma08g36136.1 sequence type=CDS gene model=Glyma08g36136 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGATAATTGGTGGAAAGAATATTATTTATTTGTCAAGGTTTCATGATATCAATTATCGATACGTGAAAATGGATCTACCATCAGCAGATGCAAACCAAATTGCCAACAATCTCTCCAACTTGGGTCAAATCTATAATGGAGAAGACCCTTCAACAGATGGCTTGGAAAGGGGTCAAGTCCTAGGAGATGGAATTCGTGTACATAGCATGGTCCTTCCCGAACTTCCTTCTAGTACAACAATTCACTTCTATAGTCCAGGAGAGGTTTACTCTATCAAGCATGATATCATAGATGTGAAGTGTCTCATGCCAGGCTTGCTATTAGCCATTAGAAAAGTAGTGCACCTCAAGAATTTGGTATATGGCTTTGAAAAGTTCATATGA
>Glyma08g36136.1 sequence type=predicted peptide gene model=Glyma08g36136 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MIIGGKNIIYLSRFHDINYRYVKMDLPSADANQIANNLSNLGQIYNGEDPSTDGLERGQVLGDGIRVHSMVLPELPSSTTIHFYSPGEVYSIKHDIIDVKCLMPGLLLAIRKVVHLKNLVYGFEKFI*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||