|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT1G01140 | AT | Annotation by Michelle Graham. TAIR10: CBL-interacting protein kinase 9 | chr1:64398-67512 REVERSE LENGTH=447 | SoyBase | E_val: 4.00E-112 | ISS |
GO:0009409 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to cold | SoyBase | N/A | ISS |
GO:0009611 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to wounding | SoyBase | N/A | ISS |
GO:0009651 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to salt stress | SoyBase | N/A | ISS |
GO:0010555 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to mannitol stimulus | SoyBase | N/A | ISS |
GO:0043266 | GO-bp | Annotation by Michelle Graham. GO Biological Process: regulation of potassium ion transport | SoyBase | N/A | ISS |
GO:0051365 | GO-bp | Annotation by Michelle Graham. GO Biological Process: cellular response to potassium ion starvation | SoyBase | N/A | ISS |
GO:0055075 | GO-bp | Annotation by Michelle Graham. GO Biological Process: potassium ion homeostasis | SoyBase | N/A | ISS |
GO:0005737 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm | SoyBase | N/A | ISS |
GO:0005886 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane | SoyBase | N/A | ISS |
GO:0005515 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: protein binding | SoyBase | N/A | ISS |
GO:0016301 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: kinase activity | SoyBase | N/A | ISS |
PTHR24345 | Panther | SERINE/THREONINE-PROTEIN KINASE PLK | JGI | ISS | |
PTHR24345:SF45 | Panther | SERINE/THREONINE-PROTEIN KINASE PLK1 | JGI | ISS | |
PF00069 | PFAM | Protein kinase domain | JGI | ISS | |
PF03822 | PFAM | NAF domain | JGI | ISS | |
UniRef100_C4P7W1 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: CBL-interacting protein kinase 12 n=1 Tax=Vitis vinifera RepID=C4P7W1_VITVI | SoyBase | E_val: 4.00E-118 | ISS |
UniRef100_I1KWK2 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1KWK2_SOYBN | SoyBase | E_val: 2.00E-169 | ISS |
Glyma08g27900 not represented in the dataset |
Glyma08g27900 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma08g27900.2 sequence type=CDS gene model=Glyma08g27900 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGCTTGCGGCTACATTCTTTCTTTGCCAGAGAATCTTCTTCTGGACTTAAATGGTGTTCTGAAAGTTACAGATTTTGGATTGAGTACATATGCGCAACAGGAGGATGAACTTCTTCGAACTGCTTGTGGAATTCCAAATTATGTTGCTCCTGAGGTGCTTAATGATAGAGGTTATGTTGGTTCTACATCTGATATCTGGTTATGTGGAGTCATCCTCTTTGTGCTTATGGCCGGGTATTTGCCCTTTGTTGAGCCAAATCATGCGAAACTGTACAAAAAAATTGGCAGGGCCCAATTTACATGTCCATCATGGTTTTCTCCTAAGGCAAAGAAACTATTGAAGCTTATTCTTGATCCAAACCCTCTAACAAGGATAAAAGTTCCTGAACTTTTAAAAGATGAATGGTTCAAAAAAGGATACAAACAAACAACTTTTATAATGGAAGAGGATATCAATGTAGATGATGTTGCTGCTGCTTTCAATGATTCTAAGGAAAATCTTGTGACGGAGAGAAAAGAGAAACCAGTGTCAATGAATGCTTTTGAGCACATATCTAGGTCACAAAGCTTCAACCTTGAAAATTTGTTTGAGAAGCAGCAAGGGTCTGTTAAGAGAGAAACACATTTTACCTCACAGCGCCCTACAAATGAAATCATGTCAAAAATTGAGGAAGTTGCCAAGCCTCTGGGATTTAATGTTCACAAGCGAAATTATAAGGTTGCCGAGATTCTCAAAGATCGTCCATCATGGTATTGTGACTGTCGATGCCTCAATGTATTGAGTGTAGTCTCAACAGGGAATGGGGGCACAATAGAGCTTATGTACATGCAGGTCTACTGA
>Glyma08g27900.2 sequence type=predicted peptide gene model=Glyma08g27900 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MACGYILSLPENLLLDLNGVLKVTDFGLSTYAQQEDELLRTACGIPNYVAPEVLNDRGYVGSTSDIWLCGVILFVLMAGYLPFVEPNHAKLYKKIGRAQFTCPSWFSPKAKKLLKLILDPNPLTRIKVPELLKDEWFKKGYKQTTFIMEEDINVDDVAAAFNDSKENLVTERKEKPVSMNAFEHISRSQSFNLENLFEKQQGSVKRETHFTSQRPTNEIMSKIEEVAKPLGFNVHKRNYKVAEILKDRPSWYCDCRCLNVLSVVSTGNGGTIELMYMQVY*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||