Glyma08g26330 - SoyBase

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Report for Sequence Feature Glyma08g26330

Feature Type:	gene_model
Chromosome:	Gm08
Start:	20663297
stop:	20668620
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma08g26330

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT5G39400	AT	Annotation by Michelle Graham. TAIR10: Calcium/lipid-binding (CaLB) phosphatase \| chr5:15766251-15767922 FORWARD LENGTH=412	SoyBase	E_val: 0	ISS
GO:0006470	GO-bp	Annotation by Michelle Graham. GO Biological Process: protein dephosphorylation	SoyBase	N/A	ISS
GO:0006499	GO-bp	Annotation by Michelle Graham. GO Biological Process: N-terminal protein myristoylation	SoyBase	N/A	ISS
GO:0009555	GO-bp	Annotation by Michelle Graham. GO Biological Process: pollen development	SoyBase	N/A	ISS
GO:0009860	GO-bp	Annotation by Michelle Graham. GO Biological Process: pollen tube growth	SoyBase	N/A	ISS
GO:0016311	GO-bp	Annotation by Michelle Graham. GO Biological Process: dephosphorylation	SoyBase	N/A	ISS
GO:0030048	GO-bp	Annotation by Michelle Graham. GO Biological Process: actin filament-based movement	SoyBase	N/A	ISS
GO:0004725	GO-mf	Annotation by Michelle Graham. GO Molecular Function: protein tyrosine phosphatase activity	SoyBase	N/A	ISS
GO:0008138	GO-mf	Annotation by Michelle Graham. GO Molecular Function: protein tyrosine/serine/threonine phosphatase activity	SoyBase	N/A	ISS
GO:0016791	GO-mf	Annotation by Michelle Graham. GO Molecular Function: phosphatase activity	SoyBase	N/A	ISS
KOG2283	KOG	Clathrin coat dissociation kinase GAK/PTEN/Auxilin and related tyrosine phosphatases	JGI		ISS
PTHR12305	Panther	PHOSPHATASE WITH HOMOLOGY TO TENSIN	JGI		ISS
PTHR12305:SF10	Panther	PTEN, ARATH	JGI		ISS
PF00782	PFAM	Dual specificity phosphatase, catalytic domain	JGI		ISS
PF10409	PFAM	C2 domain of PTEN tumour-suppressor protein	JGI		ISS
UniRef100_G7L452	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN n=1 Tax=Medicago truncatula RepID=G7L452_MEDTR	SoyBase	E_val: 0	ISS
UniRef100_I1KWB7	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1KWB7_SOYBN	SoyBase	E_val: 0	ISS

Expression Patterns of Glyma08g26330

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma08g26330 not represented in the dataset	Glyma08g26330 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma08g26330 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.08g241500	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma08g26330

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Transcripts of Glyma08g26330

Limit To All Plant Sequences

>Glyma08g26330.3   sequence type=transcript   gene model=Glyma08g26330   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
CAGAACAGAGCCTTTCATATGTTTTCGGTTGTGTTGTGTCCAAATTTGGAAATATATTGTGGTGAAGTGAGGTCATCATTTCCTCTAAAAATGGCAAAGCATTTCTGCCAATCCCATTCCCAAATTTTTCTCTCTTTTGTTACCAACCTAACCTATCACAACATGGGTCATGAAGGTCCTCATCATTTCATCCTCCCATTGGCTTCTCTAGGGTCTCCTACTTTCCTTTGGAGCCCTAGATTTTGCTGCTTTCTGCAATTTCAATTTCAGAGTCCTGATCTGCAGCTACATGTTCCGCTTAATTAAGTACCTTGTCAGTGTGGAACCTGGCATATCAACCTAATGGGGTTGAAATTTACAAAGCAGGGACCACCTAAAATTGAGGATCCAAGTTTACATAATCAAATGATCAATTACCTTACCAAGAATTTTATTCGCAACTTGGTATCTAAGCAACGAAGAAGAATGCTTATTGCTGGTTATGATCTTGACATGTCATATATCACAGACCGAGTATTAGCAATGTCATTTCCGGCACAACGTATGCGAGCAATGTATCGAAATCCTCTATGGCAAGTCAAATCTGTGTTGGACATGAGACATTATGACCATTATAAGATCTATAATCTCTGTATAGAAGAAAGTTATGATCCAGATAACTTCTATGGACGCGTGGAAGCATACCCCTTTGATGATAACCATGTGCCATCTCTTGAAATGATCAAAGCTTTCTGTGAAAGTGTGGATTCATGGCTGTCAAGTGACCCAAAAAATATTGCTGTTATTCATTGCATGGCGGGAAAGGGTAGAACTGGATTAATGGTGAGTGCATACCTAACTTATTGCGGCATGTCAGCAGATGAGGCTCTTCAATTGTATGCAGATAGACGGACAACCAATAATGAAGGAGTATCAATACCAAGCCAGCGTCGATACGTAGCATACTGGGATAGTCTACTTTCAAATTCTGTCCCAAGGGGAACTGGAAATGGACCGACAAAGGTGAACTTGCCTCAGCCATGTGGCAGAGAATTACGGCGAATCCGGCTTTATGATACAATCAACATTGACACAATATTCTTTGTTATCTCAGAGCTACACGAGATTCCTAATGAGGTGTATCGTCCACCAGTGGAAGCTTATCGTGGCTGCTGTAGACAGATTAAGAAAGGGTATCAGAGAAATAATAGTCCTCGCTATTATATCTCTATTCTTGAAGGTGATAAAGATGGAAATCAATCAGAAACAGAAGAACCTCGCATTGTAGTTCAAATGGACACAGAGAGTCCAGCAATATACCAAAAATCATGTTTGGACCATTATTTTGATAAACCTATACAAGTAACAGGAGATGTACGGCTCACATTCTATGAGAAAATGATAGGAGGGCGCCTGTTCTACTGCTGTTTTAATACAGCTTTTATTAGGAACAGCTTACTACAGCTCCCAATACAAGAGTTGGACAAAGTTGGGAAGAAAGGAACATCAATATGTGGCCCTGACTTCTGCTTAGAATTATTGTTTGGTCCTGCTAATGCAGGATACTCATCGTCAAGTATATCCAATGATGAATATTCTAATGATGATTCTTTATAATAATATTTCCACATATCTTTGCATAATATTAAAGGCCATGTTCAATTTACTGCTGTAGCATATTCCTGCAAAATGATCCCAACAATGAGTCCCTTGTGGTGTGATGTAGTAAGAGCATTCATTCCTCCAACTGCTTTGCCGTCTAATTTTTCATTGGCCAAAGGCATGGAGAGTAAGTGTAATTTTTGTATTGTTAGTGATTGAGTAGCATTTTGCAGAAGATGAAGTTGAGAGCATTATAATGCAAAATTTCACTAGTTTTCTTGGATTTAATTTTGATGTTTAAATTTTATTAATCACCATTCGTGTAAAAATTCATTATTGAGTTTGAC

>Glyma08g26330.4   sequence type=transcript   gene model=Glyma08g26330   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
CAGAACAGAGCCTTTCATATGTTTTCGGTTGTGTTGTGTCCAAATTTGGAAATATATTGTGGTGAAGTGAGGTCATCATTTCCTCTAAAAATGGCAAAGCATTTCTGCCAATCCCATTCCCAAATTTTTCTCTCTTTTGTTACCAACCTAACCTATCACAACATGGGTCATGAAGGTCCTCATCATTTCATCCTCCCATTGGCTTCTCTAGGGTCTCCTACTTTCCTTTGGAGCCCTAGATTTTGCTGCTTTCTGCAATTTCAATTTCAGAGTCCTGATCTGCAGCTACATGTTCCGCTTAATTAATCAATTGATCAGCCATAATGGGTGTAGCAGTTGCATCACCTTCGATTGCATGAGTTCTTTGCACACCTTCATGAATATTTGTTAGAAATGTGCACCCTGCAATGGAGTACAATATGTACTATAAATCTAAAAGAATGACAAGATTAATGATATTGCAATATGTCATGTTTCTCGACATTTTTTTATGGTTGTCTTCCTCAACAACTATGATAGAGATTAGCCTCCTTCGAATTGAATTTCTTCTCTCTTGAATGTTTTTGCACCCCAACTTCAGTGGTTCTAGCAATCTCAAACTCTGTACCTTGTCAGTGTGGAACCTGGCATATCAACCTAATGGGGTTGAAATTTACAAAGCAGGGACCACCTAAAATTGAGGATCCAAGTTTACATAATCAAATGATCAATTACCTTACCAAGAATTTTATTCGCAACTTGGTATCTAAGCAACGAAGAAGAATGCTTATTGCTGGTTATGATCTTGACATGTCATATATCACAGACCGAGTATTAGCAATGTCATTTCCGGCACAACGTATGCGAGCAATGTATCGAAATCCTCTATGGCAAGTCAAATCTGTGTTGGACATGAGACATTATGACCATTATAAGGCGGGAAAGGGTAGAACTGGATTAATGGTGAGTGCATACCTAACTTATTGCGGCATGTCAGCAGATGAGGCTCTTCAATTGTATGCAGATAGACGGACAACCAATAATGAAGGAGTATCAATACCAAGCCAGCGTCGATACGTAGCATACTGGGATAGTCTACTTTCAAATTCTGTCCCAAGGGGAACTGGAAATGGACCGACAAAGGTGAACTTGCCTCAGCCATGTGGCAGAGAATTACGGCGAATCCGGCTTTATGATACAATCAACATTGACACAATATTCTTTGTTATCTCAGAGCTACACGAGATTCCTAATGAGGTGTATCGTCCACCAGTGGAAGCTTATCGTGGCTGCTGTAGACAGATTAAGAAAGGGTATCAGAGAAATAATAGTCCTCGCTATTATATCTCTATTCTTGAAGGTGATAAAGATGGAAATCAATCAGAAACAGAAGAACCTCGCATTGTAGTTCAAATGGACACAGAGAGTCCAGCAATATACCAAAAATCATGTTTGGACCATTATTTTGATAAACCTATACAAGTAACAGGAGATGTACGGCTCACATTCTATGAGAAAATGATAGGAGGGCGCCTGTTCTACTGCTGTTTTAATACAGCTTTTATTAGGAACAGCTTACTACAGCTCCCAATACAAGAGTTGGACAAAGTTGGGAAGAAAGGAACATCAATATGTGGCCCTGACTTCTGCTTAGAATTATTGTTTGGTCCTGCTAATGCAGGATACTCATCGTCAAGTATATCCAATGATGAATATTCTAATGATGATTCTTTATAATAATATTTCCACATATCTTTGCATAATATTAAAGGCCATGTTCAATTTACTGCTGTAGCATATTCCTGCAAAATGATCCCAACAATGAGTCCCTTGTGGTGTGATGTAGTAAGAGCATTCATTCCTCCAACTGCTTTGCCGTCTAATTTTTCATTGGCCAAAGGCATGGAGAGTAAGTGTAATTTTTGTATTGTTAGTGATTGAGTAGCATTTTGCAGAAGATGAAGTTGAGAGCATTATAATGCAAAATTTCACTAGTTTTCTTGGATTTAATTTTGATGTTTAAATTTTATTAATCACCATTCGTGTAAAAATTCATTATTGAGTTTGAC

Coding sequences of Glyma08g26330

Limit To All Plant Sequences

>Glyma08g26330.2   sequence type=CDS   gene model=Glyma08g26330   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGGGTTGAAATTTACAAAGCAGGGACCACCTAAAATTGAGGATCCAAGTTTACATAATCAAATGATCAATTACCTTACCAAGAATTTTATTCGCAACTTGGTATCTAAGCAACGAAGAAGAATGCTTATTGCTGGTTATGATCTTGACATGTCATATATCACAGACCGAGTATTAGCAATGTCATTTCCGGCACAACGTATGCGAGCAATGTATCGAAATCCTCTATGGCAAGTCAAATCTGTGTTGGACATGAGACATTATGACCATTATAAGATCTATAATCTCTGTATAGAAGAAAGTTATGATCCAGATAACTTCTATGGACGCGTGGAAGCATACCCCTTTGATGATAACCATGTGCCATCTCTTGAAATGATCAAAGCTTTCTGTGAAAGTGTGGATTCATGGCTGTCAAGTGACCCAAAAAATATTGCTGTTATTCATTGCATGGCGGGAAAGGGTAGAACTGGATTAATGGTGAGTGCATACCTAACTTATTGCGGCATGTCAGCAGATGAGGCTCTTCAATTGTATGCAGATAGACGGACAACCAATAATGAAGGAGTATCAATACCAAGCCAGCGTCGATACGTAGCATACTGGGATAGTCTACTTTCAAATTCTGTCCCAAGGGGAACTGGAAATGGACCGACAAAGGTGAACTTGCCTCAGCCATGTGGCAGAGAATTACGGCGAATCCGGCTTTATGATACAATCAACATTGACACAATATTCTTTGTTATCTCAGAGCTACACGAGATTCCTAATGAGGTGTATCGTCCACCAGTGGAAGCTTATCGTGGCTGCTGTAGACAGATTAAGAAAGGGTATCAGAGAAATAATAGTCCTCGCTATTATATCTCTATTCTTGAAGGTGATAAAGATGGAAATCAATCAGAAACAGAAGAACCTCGCATTGTAGTTCAAATGGACACAGAGAGTCCAGCAATATACCAAAAATCATGTTTGGACCATTATTTTGATAAACCTATACAAGTAACAGGAGATGTACGGCTCACATTCTATGAGAAAATGATAGGAGGGCGCCTGTTCTACTGCTGTTTTAATACAGCTTTTATTAGGAACAGCTTACTACAGCTCCCAATACAAGAGTTGGACAAAGTTGGGAAGAAAGGAACATCAATATGTGGCCCTGACTTCTGCTTAGAATTATTGTTTGGTCCTGCTAATGCAGGATACTCATCGTCAAGTATATCCAATGATGAATATTCTAATGATGATTCTTTATAA

>Glyma08g26330.3   sequence type=CDS   gene model=Glyma08g26330   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGGGTTGAAATTTACAAAGCAGGGACCACCTAAAATTGAGGATCCAAGTTTACATAATCAAATGATCAATTACCTTACCAAGAATTTTATTCGCAACTTGGTATCTAAGCAACGAAGAAGAATGCTTATTGCTGGTTATGATCTTGACATGTCATATATCACAGACCGAGTATTAGCAATGTCATTTCCGGCACAACGTATGCGAGCAATGTATCGAAATCCTCTATGGCAAGTCAAATCTGTGTTGGACATGAGACATTATGACCATTATAAGATCTATAATCTCTGTATAGAAGAAAGTTATGATCCAGATAACTTCTATGGACGCGTGGAAGCATACCCCTTTGATGATAACCATGTGCCATCTCTTGAAATGATCAAAGCTTTCTGTGAAAGTGTGGATTCATGGCTGTCAAGTGACCCAAAAAATATTGCTGTTATTCATTGCATGGCGGGAAAGGGTAGAACTGGATTAATGGTGAGTGCATACCTAACTTATTGCGGCATGTCAGCAGATGAGGCTCTTCAATTGTATGCAGATAGACGGACAACCAATAATGAAGGAGTATCAATACCAAGCCAGCGTCGATACGTAGCATACTGGGATAGTCTACTTTCAAATTCTGTCCCAAGGGGAACTGGAAATGGACCGACAAAGGTGAACTTGCCTCAGCCATGTGGCAGAGAATTACGGCGAATCCGGCTTTATGATACAATCAACATTGACACAATATTCTTTGTTATCTCAGAGCTACACGAGATTCCTAATGAGGTGTATCGTCCACCAGTGGAAGCTTATCGTGGCTGCTGTAGACAGATTAAGAAAGGGTATCAGAGAAATAATAGTCCTCGCTATTATATCTCTATTCTTGAAGGTGATAAAGATGGAAATCAATCAGAAACAGAAGAACCTCGCATTGTAGTTCAAATGGACACAGAGAGTCCAGCAATATACCAAAAATCATGTTTGGACCATTATTTTGATAAACCTATACAAGTAACAGGAGATGTACGGCTCACATTCTATGAGAAAATGATAGGAGGGCGCCTGTTCTACTGCTGTTTTAATACAGCTTTTATTAGGAACAGCTTACTACAGCTCCCAATACAAGAGTTGGACAAAGTTGGGAAGAAAGGAACATCAATATGTGGCCCTGACTTCTGCTTAGAATTATTGTTTGGTCCTGCTAATGCAGGATACTCATCGTCAAGTATATCCAATGATGAATATTCTAATGATGATTCTTTATAA

>Glyma08g26330.4   sequence type=CDS   gene model=Glyma08g26330   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGGGTTGAAATTTACAAAGCAGGGACCACCTAAAATTGAGGATCCAAGTTTACATAATCAAATGATCAATTACCTTACCAAGAATTTTATTCGCAACTTGGTATCTAAGCAACGAAGAAGAATGCTTATTGCTGGTTATGATCTTGACATGTCATATATCACAGACCGAGTATTAGCAATGTCATTTCCGGCACAACGTATGCGAGCAATGTATCGAAATCCTCTATGGCAAGTCAAATCTGTGTTGGACATGAGACATTATGACCATTATAAGGCGGGAAAGGGTAGAACTGGATTAATGGTGAGTGCATACCTAACTTATTGCGGCATGTCAGCAGATGAGGCTCTTCAATTGTATGCAGATAGACGGACAACCAATAATGAAGGAGTATCAATACCAAGCCAGCGTCGATACGTAGCATACTGGGATAGTCTACTTTCAAATTCTGTCCCAAGGGGAACTGGAAATGGACCGACAAAGGTGAACTTGCCTCAGCCATGTGGCAGAGAATTACGGCGAATCCGGCTTTATGATACAATCAACATTGACACAATATTCTTTGTTATCTCAGAGCTACACGAGATTCCTAATGAGGTGTATCGTCCACCAGTGGAAGCTTATCGTGGCTGCTGTAGACAGATTAAGAAAGGGTATCAGAGAAATAATAGTCCTCGCTATTATATCTCTATTCTTGAAGGTGATAAAGATGGAAATCAATCAGAAACAGAAGAACCTCGCATTGTAGTTCAAATGGACACAGAGAGTCCAGCAATATACCAAAAATCATGTTTGGACCATTATTTTGATAAACCTATACAAGTAACAGGAGATGTACGGCTCACATTCTATGAGAAAATGATAGGAGGGCGCCTGTTCTACTGCTGTTTTAATACAGCTTTTATTAGGAACAGCTTACTACAGCTCCCAATACAAGAGTTGGACAAAGTTGGGAAGAAAGGAACATCAATATGTGGCCCTGACTTCTGCTTAGAATTATTGTTTGGTCCTGCTAATGCAGGATACTCATCGTCAAGTATATCCAATGATGAATATTCTAATGATGATTCTTTATAA

Predicted protein sequences of Glyma08g26330

Limit To All Plant Sequences

>Glyma08g26330.2   sequence type=predicted peptide   gene model=Glyma08g26330   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MGLKFTKQGPPKIEDPSLHNQMINYLTKNFIRNLVSKQRRRMLIAGYDLDMSYITDRVLAMSFPAQRMRAMYRNPLWQVKSVLDMRHYDHYKIYNLCIEESYDPDNFYGRVEAYPFDDNHVPSLEMIKAFCESVDSWLSSDPKNIAVIHCMAGKGRTGLMVSAYLTYCGMSADEALQLYADRRTTNNEGVSIPSQRRYVAYWDSLLSNSVPRGTGNGPTKVNLPQPCGRELRRIRLYDTINIDTIFFVISELHEIPNEVYRPPVEAYRGCCRQIKKGYQRNNSPRYYISILEGDKDGNQSETEEPRIVVQMDTESPAIYQKSCLDHYFDKPIQVTGDVRLTFYEKMIGGRLFYCCFNTAFIRNSLLQLPIQELDKVGKKGTSICGPDFCLELLFGPANAGYSSSSISNDEYSNDDSL*

>Glyma08g26330.3   sequence type=predicted peptide   gene model=Glyma08g26330   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MGLKFTKQGPPKIEDPSLHNQMINYLTKNFIRNLVSKQRRRMLIAGYDLDMSYITDRVLAMSFPAQRMRAMYRNPLWQVKSVLDMRHYDHYKIYNLCIEESYDPDNFYGRVEAYPFDDNHVPSLEMIKAFCESVDSWLSSDPKNIAVIHCMAGKGRTGLMVSAYLTYCGMSADEALQLYADRRTTNNEGVSIPSQRRYVAYWDSLLSNSVPRGTGNGPTKVNLPQPCGRELRRIRLYDTINIDTIFFVISELHEIPNEVYRPPVEAYRGCCRQIKKGYQRNNSPRYYISILEGDKDGNQSETEEPRIVVQMDTESPAIYQKSCLDHYFDKPIQVTGDVRLTFYEKMIGGRLFYCCFNTAFIRNSLLQLPIQELDKVGKKGTSICGPDFCLELLFGPANAGYSSSSISNDEYSNDDSL*

>Glyma08g26330.4   sequence type=predicted peptide   gene model=Glyma08g26330   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MGLKFTKQGPPKIEDPSLHNQMINYLTKNFIRNLVSKQRRRMLIAGYDLDMSYITDRVLAMSFPAQRMRAMYRNPLWQVKSVLDMRHYDHYKAGKGRTGLMVSAYLTYCGMSADEALQLYADRRTTNNEGVSIPSQRRYVAYWDSLLSNSVPRGTGNGPTKVNLPQPCGRELRRIRLYDTINIDTIFFVISELHEIPNEVYRPPVEAYRGCCRQIKKGYQRNNSPRYYISILEGDKDGNQSETEEPRIVVQMDTESPAIYQKSCLDHYFDKPIQVTGDVRLTFYEKMIGGRLFYCCFNTAFIRNSLLQLPIQELDKVGKKGTSICGPDFCLELLFGPANAGYSSSSISNDEYSNDDSL*

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