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Report for Sequence Feature Glyma08g26191

Feature Type:gene_model
Chromosome:Gm08
Start:20539191
stop:20548504
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma08g26191
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G01090AT Annotation by Michelle Graham. TAIR10: SNF1 kinase homolog 10 | chr3:31437-33977 REVERSE LENGTH=512 SoyBaseE_val: 3.00E-163ISS
GO:0003006GO-bp Annotation by Michelle Graham. GO Biological Process: developmental process involved in reproduction SoyBaseN/AISS
GO:0006007GO-bp Annotation by Michelle Graham. GO Biological Process: glucose catabolic process SoyBaseN/AISS
GO:0006468GO-bp Annotation by Michelle Graham. GO Biological Process: protein phosphorylation SoyBaseN/AISS
GO:0006486GO-bp Annotation by Michelle Graham. GO Biological Process: protein glycosylation SoyBaseN/AISS
GO:0009594GO-bp Annotation by Michelle Graham. GO Biological Process: detection of nutrient SoyBaseN/AISS
GO:0009738GO-bp Annotation by Michelle Graham. GO Biological Process: abscisic acid mediated signaling pathway SoyBaseN/AISS
GO:0010050GO-bp Annotation by Michelle Graham. GO Biological Process: vegetative phase change SoyBaseN/AISS
GO:0010182GO-bp Annotation by Michelle Graham. GO Biological Process: sugar mediated signaling pathway SoyBaseN/AISS
GO:0010260GO-bp Annotation by Michelle Graham. GO Biological Process: organ senescence SoyBaseN/AISS
GO:0080022GO-bp Annotation by Michelle Graham. GO Biological Process: primary root development SoyBaseN/AISS
GO:0000152GO-cc Annotation by Michelle Graham. GO Cellular Compartment: nuclear ubiquitin ligase complex SoyBaseN/AISS
GO:0005634GO-cc Annotation by Michelle Graham. GO Cellular Compartment: nucleus SoyBaseN/AISS
GO:0004672GO-mf Annotation by Michelle Graham. GO Molecular Function: protein kinase activity SoyBaseN/AISS
GO:0004674GO-mf Annotation by Michelle Graham. GO Molecular Function: protein serine/threonine kinase activity SoyBaseN/AISS
GO:0005515GO-mf Annotation by Michelle Graham. GO Molecular Function: protein binding SoyBaseN/AISS
KOG0583 KOG Serine/threonine protein kinase JGI ISS
PTHR24343Panther SERINE/THREONINE KINASE JGI ISS
PTHR24343:SF123Panther JGI ISS
PF00069PFAM Protein kinase domain JGI ISS
UniRef100_B9SVJ9UniRef Annotation by Michelle Graham. Most informative UniRef hit: 5-AMP-activated protein kinase, putative n=1 Tax=Ricinus communis RepID=B9SVJ9_RICCO SoyBaseE_val: 3.00E-164ISS
UniRef100_UPI0002338F44UniRef Annotation by Michelle Graham. Best UniRef hit: UPI0002338F44 related cluster n=1 Tax=unknown RepID=UPI0002338F44 SoyBaseE_val: 0ISS

Expression Patterns of Glyma08g26191
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma08g26191 not represented in the dataset
Glyma08g26191 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma08g26191 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.08g240400 Wm82.a2.v1IGC As supplied by JGI

References for Glyma08g26191
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma08g26191
>Glyma08g26191.1   sequence type=CDS   gene model=Glyma08g26191   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGATGCAGCAGCTGGCCAGGGTTATTGTGGTGGTGCAGACCTGGACATGTTTCTAACGAATTATAAATTGGGAAAAACTCTTGGCATTGGATCCATGGGCAAGGTGAAAATTGCAGAACATGTATTGACTGGCCAGAAGGTTGCCATCAAGATCCTTAACCGTCGCAAGATAAAGAACATGGAAATGGAAGAAAAAGTGAAAAGAGAAATCAAAATTTTAAGATTGCTCGTGCATCCTCACATTATACAACTTTATGAGATCATAGAGACCCCGATTGACATCTATATTGTTATGGAGTATGCAAAATCAGGAGAGCTCTTTGATTACATAGTAGAAAAAGGTAGGTTACAAGAAGATGAAGCTCGTAATATTTTTCAGCAGATAATCTCTGGTGTGGAGTATTGTCACAGCAACATGGTGGTTCATAGAGATTTGAGGCCTGAGAAAGTACTCTTGGACTCCAAATGTAATGTCAAGATTGCTGGATTTGGCTGGAGCAACATCATTCGCGATGGTCACTTTCTTAAGACACGTTGTGGAAGTAGTAACTATGCAGCTCCTGAGGTTATCTCTGGGAAATTATATGTTGGACCAAAAGTTGATGTCTGGAGTTGTGGTGTAATTTTATATTTTCTTCTTTGTGGTTCTTTTCCTTTTGACGATGAAAACATCCCAAATCTCTTCAACAAAATAAAGGGTGGGATTTTCACTCTTCCTTGCCATCTATCTCCTGGAGCCAGTGATTTGATACCAAAGATGCTCATGGTTGACCCCGTGAAGAGGATGACCATACCTGAGATCTGTCAACACCCATGGTTCCAAAGTTGA
Predicted protein sequences of Glyma08g26191
>Glyma08g26191.1   sequence type=predicted peptide   gene model=Glyma08g26191   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MDAAAGQGYCGGADLDMFLTNYKLGKTLGIGSMGKVKIAEHVLTGQKVAIKILNRRKIKNMEMEEKVKREIKILRLLVHPHIIQLYEIIETPIDIYIVMEYAKSGELFDYIVEKGRLQEDEARNIFQQIISGVEYCHSNMVVHRDLRPEKVLLDSKCNVKIAGFGWSNIIRDGHFLKTRCGSSNYAAPEVISGKLYVGPKVDVWSCGVILYFLLCGSFPFDDENIPNLFNKIKGGIFTLPCHLSPGASDLIPKMLMVDPVKRMTIPEICQHPWFQS*






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