Report for Sequence Feature Glyma08g26160
Feature Type: gene_model
Chromosome: Gm08
Start: 20518596
stop: 20520591
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma08g26160
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT1G72030 AT
Annotation by Michelle Graham. TAIR10: Acyl-CoA N-acyltransferases (NAT) superfamily protein | chr1:27110887-27111825 FORWARD LENGTH=256
SoyBase E_val: 8.00E-68 ISS
GO:0008152 GO-bp
Annotation by Michelle Graham. GO Biological Process: metabolic process
SoyBase N/A ISS
GO:0008080 GO-mf
Annotation by Michelle Graham. GO Molecular Function: N-acetyltransferase activity
SoyBase N/A ISS
PTHR23091 Panther
N-TERMINAL ACETYLTRANSFERASE
JGI ISS
PTHR23091:SF34 Panther
SUBFAMILY NOT NAMED
JGI ISS
PF00583 PFAM
Acetyltransferase (GNAT) family
JGI ISS
UniRef100_B9SZ62 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: N-acetyltransferase, putative n=1 Tax=Ricinus communis RepID=B9SZ62_RICCO
SoyBase E_val: 5.00E-79 ISS
UniRef100_I1KWA3 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1KWA3_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma08g26160
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Paralogs of Glyma08g26160
Paralog Evidence Comments
Glyma12g00420 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma08g26160 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.08g240100 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma08g26160
Coding sequences of Glyma08g26160
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma08g26160.1 sequence type=CDS gene model=Glyma08g26160 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGCTCATTTATTGGCGAGCAACCCCAATGCTTCACAGAAACTTATATGCTCAAACTTGGAGTACTATGGTGTTAGAAGTAGAAGAGGATCCAGAACCACGAGTGCGTGTTATAGAGTGGGAAGGAAAAGACGATGTGGTTTGGTGTTGCAATGCAGCAGCACAACTGATCAGGATGTGAGGTTGCAGATTGAGAATGGTAGCAGCGGAAAGCTTAAGCAGCAGTTTGAATATTTGGTTTGTGAATATGGGTGGAAAGTAAGAAGACTATTTGAAAACGCAGATGAGATAAAGAAGGCATCTCAAGTTCAGGCCGAAGCTTTCCATGTTCCTGTCTCTCTTTTCAATGACTTGTTCTTCCAGTTCTTTCAGGCGGAAGTGCTTTCAGGGCTTCTTTACAAGCTTAAAAACTCACCTCCTAATAGGTATGCTTGTTTGGTAGCTGAGACAGCAATAGACGATCCAGATTCGGCAAAACAACTTGTAGGTGTCATAGATGTCACTGTCTTACGAGACCAAAACGTGCTCCAACATCTTCCTCCCGAAGCTGAAGAATACCTTTACATATCAGGAATAGCCGTCTCCAAAACATTCAGGAGGCGAAAAATAGCGACTGCCCTGTTGAAAGCCTGTGACATGCTTTCCATTTTGTGGGGTTTCGAGTTTCTTGCCCTTCGAGCTTATGAAGAAGATCTAGGTGCTCGCAAATTGTACACAAATGCTGGGTACCAAGTTGTGTCTCGTGATCCACCATGGACAAGTAATTGGATTGGAAGGAAATGTCGTGTTCTTATGATCAAAAGAACTAGTTTCTCCAAATAG
Predicted protein sequences of Glyma08g26160
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma08g26160.1 sequence type=predicted peptide gene model=Glyma08g26160 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MAHLLASNPNASQKLICSNLEYYGVRSRRGSRTTSACYRVGRKRRCGLVLQCSSTTDQDVRLQIENGSSGKLKQQFEYLVCEYGWKVRRLFENADEIKKASQVQAEAFHVPVSLFNDLFFQFFQAEVLSGLLYKLKNSPPNRYACLVAETAIDDPDSAKQLVGVIDVTVLRDQNVLQHLPPEAEEYLYISGIAVSKTFRRRKIATALLKACDMLSILWGFEFLALRAYEEDLGARKLYTNAGYQVVSRDPPWTSNWIGRKCRVLMIKRTSFSK*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
