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Report for Sequence Feature Glyma08g23921
Feature Type: gene_model
Chromosome: Gm08
Start: 18212264
stop: 18219649
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma08g23921
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT1G79640 AT
Annotation by Michelle Graham. TAIR10: Protein kinase superfamily protein | chr1:29966913-29971387 REVERSE LENGTH=687
SoyBase E_val: 0 ISS
GO:0006468 GO-bp
Annotation by Michelle Graham. GO Biological Process: protein phosphorylation
SoyBase N/A ISS
GO:0005634 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: nucleus
SoyBase N/A ISS
GO:0004672 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein kinase activity
SoyBase N/A ISS
GO:0004713 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein tyrosine kinase activity
SoyBase N/A ISS
GO:0005524 GO-mf
Annotation by Michelle Graham. GO Molecular Function: ATP binding
SoyBase N/A ISS
GO:0016301 GO-mf
Annotation by Michelle Graham. GO Molecular Function: kinase activity
SoyBase N/A ISS
GO:0016772 GO-mf
Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring phosphorus-containing groups
SoyBase N/A ISS
KOG0582
KOG
Ste20-like serine/threonine protein kinase
JGI ISS
PTHR24361 Panther
MITOGEN-ACTIVATED KINASE KINASE KINASE
JGI ISS
PTHR24361:SF72 Panther
JGI ISS
PF00069 PFAM
Protein kinase domain
JGI ISS
UniRef100_G7JVI5 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Serine/threonine protein kinase n=1 Tax=Medicago truncatula RepID=G7JVI5_MEDTR
SoyBase E_val: 0 ISS
UniRef100_UPI0002338C51 UniRef
Annotation by Michelle Graham. Best UniRef hit: UPI0002338C51 related cluster n=1 Tax=unknown RepID=UPI0002338C51
SoyBase E_val: 0 ISS
Expression Patterns of Glyma08g23921
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma08g23921
Paralog Evidence Comments
Glyma07g00500 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma08g23921 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.08g223700 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma08g23921
Transcripts of Glyma08g23921
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma08g23921.2 sequence type=transcript gene model=Glyma08g23921 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
TGGGGGGTGGTGAGAATTAGAAATAGCAGTAGGGGCGGGGGAGTTAGTTGCGCGCAGAAGAGAAGAGAGGTGGCGGGGAATGACTTAACAAACAAAAAACACTGGCCATCCGATACATAAGGCAACACAATCACGAGAAAGCTGCGGAAGGAAACGGACCCAATTACCCTTTCTTTCCACAATTCATTCATTCACGTGACATCACCTCTCTCACCCTTTCTAGTATCCAATTTCCTTCCAATTCGATCCACAGAAGCAGAAGGAGATGGAAAAGAAGAAGTACCCCATCGGGGAGGAGCATTACCTTCTCTACGAGGAGATTGGCCAGGGGGTCAGTGCCTCTGTCCACCGCGCTCTCTGCCTCCCCTTCAACGAGGTCGTCGCCATCAAAATCCTCGACTTCGAACGTGACAACTGCGATCTGAACAACGTTTCTCGCGAGGCCCAGACAATGATCCTGGTGGACCACCCCAACGTCCTCAAATCCCACTGCTCCTTCGTCAGCGATCACAATCTCTGGGTTGTCATGCCCTTCATGTCCGGCGGTTCATGCCTCCACATACTCAAAGCCGCCCACCCCGACGGTTTCGAGGAGGTGGTCATTGCTACCGTTCTCAAAGAGGTCTTGAAGGGTTTGGAGTACCTTCACCATCACGGCCACATCCACCGCGACGTCAAGGCCGGCAACATTCTCATCGATTCACGCGGGGCCGTCAAGCTCGGCGACTTTGGTGTCTCTGCCTGCCTCTTCGATTCCGGTGACCGCCAACGCACAAGGAATACATTTGTAGGAACACCTTGCTGGATGGCACCTGAGGTCATGGAGCAACTTCACGGCTACAATTTCAAAGCTGACATCTGGTCGTTTGGTATAACCGCCTTGGAGCTTGCACATGGCCATGCCCCTTTCTCAAAGTTTCCACCAATGAAGGTACTGCTCATGACTCTCCAAAATGCACCCCCTGGCCTTGACTACGAAAGGGATAGGAAGTTCAGTAAGTCTTTTAAGCAGATGATTGCTAGTTGCTTGGTAAAAGATCCTTCAAAACGACCCTCTGCAAGCAAGTTGTTAAAACATTCCTTCTTTAAGCAGGCTCGCTCCAGTGATACTATAGTCAAAAAACTTTTGGAGGGGTTGCCTGCTTTAGGTGACCGAATGGAAGCTCTAAAGAGAAAAGAAGAAGATATGCTCGCACAAAAGAAAATGCCTGATGGAAAGATGGAGGAATTATCACAGAACGAATACAAACGAGGAATTAGTGGTTGGAACTTCAATCTTGACGACATGAAGGCTCAGGCTTCCTTGATCCACGATTTCGACGATGCTATGTCCGATATCAACCATGCAGGAAGTTCAAGTTCTTTATCTACACTTGATTCACTAGATAAGCAATTGCCAAGTGCAATTCACAAACCTTCTCGATCTGCTGATATGGAAGAGAATGATGAGATGCGACGTCAATTAGCTTCTGCTCTCCTAGTTGATTCTGCAGTAAACGATGCCAAAACTAGGTTCGAAAAATCCGATGATGACTCTAGCATCGCCAGTTCAAGCCATGAACCACAAACTTCTTCATCCTGTCCAGATGATCATGTGAACAATCATTTGGGTGAAAAATCTGATATGGAAAATGGTGGAAGATCCGTGGAGGGAATGGCTACCCATTATTATCATAGAAGAGGATGTTCATCCAGCATCTTACCTGAAGCTACTCTTCTTCCTATTCGGGCAGAAAGTGAGAAACCACAAAATCTGCCCCACAACGTTTCAAGTTGCAATGCAACTTCAGTTCCACAGACAGGAGAGGACGTGCTTACCGAACTTCCTTCTAGAGTCTCAAAATCATCAGCTAATTCTGATGACACTGATGAGAAATCAAAGGTGCCAGTTGTACAGCAGAGAGGGCGTTTTAAGGTTACATCTGAGAATGTTGACCCAGAAAAGGTGGCCCCTTCTCCTCTATTGCAAAAGAGCCATAGCATGCAGGTTTTTAGCCAGCATAATACTGCTTCTATACATCCTACTTTGCCATTACTACCGGCATCTGATGCCACATCATCAAATCTTTCTGGCTACTCTCTGTTTCCTGTGTTACACTCTGTACTGCAGACAAATATTCTTCAAAGGGAGGGCATTTTAAGTTTAATGAAGCAAATTACTGTCGGTGACTCTTCAGCTGATGGCACATGCAACCCAGCACAGGTAGCAGCAACAGAGAAATCTTTGCTTGAAGCAGCTCACGAGAGGGAAAAGGAGTTACTTCATGAGATAACAGATTTGCAGTGGAGGCTTATCTGTACCCAGGAGGAGCTTCAAAAGTTGAAAACAGAAAACGCCCAGGTGTGATTGCCTTGTTGGTTTTCAGAAGTGATTGGGTTAAGTGGATGCTTGGATTACTCAATTTTAAGTTCTTTACGGACACTTAAAAAATTGAAGTGCAGGAAGAAACTAGAATAAGGGCCATACAAAATCTCTAGACTAGATATGAAGCAGAATGCTACTTGTAGGTTTTTTTTTTTTTTTAATAATTTAGAAGCTATAAACTTTACTCATAGTTTTCTCGTTAGAGCAGTTTCGGTGTTGATAATTGTTTTTGTAAATTATTTTAGCATTATTTCCTGGTTGTAAATTATAATGCACATGGTACTGCGTGTCCTATATTCCTCGTCTTTAGAGTTCATTTAGTATTCTTTTGATATTATTTCGATAGTCGCTCCAGTTAGAAAAATACTAAGTTGATAATGATCGATTATTGGACATTTCTTTGAAAACTCAATTTGATATTCAGAAAGGCAATCGGTCGCATATTTCC
Coding sequences of Glyma08g23921
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma08g23921.1 sequence type=CDS gene model=Glyma08g23921 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGAAAAGAAGAAGTACCCCATCGGGGAGGAGCATTACCTTCTCTACGAGGAGATTGGCCAGGGGGTCAGTGCCTCTGTCCACCGCGCTCTCTGCCTCCCCTTCAACGAGGTCGTCGCCATCAAAATCCTCGACTTCGAACGTGACAACTGCGATCTGAACAACGTTTCTCGCGAGGCCCAGACAATGATCCTGGTGGACCACCCCAACGTCCTCAAATCCCACTGCTCCTTCGTCAGCGATCACAATCTCTGGGTTGTCATGCCCTTCATGTCCGGCGGTTCATGCCTCCACATACTCAAAGCCGCCCACCCCGACGGTTTCGAGGAGGTGGTCATTGCTACCGTTCTCAAAGAGGTCTTGAAGGGTTTGGAGTACCTTCACCATCACGGCCACATCCACCGCGACGTCAAGGCCGGCAACATTCTCATCGATTCACGCGGGGCCGTCAAGCTCGGCGACTTTGGTGTCTCTGCCTGCCTCTTCGATTCCGGTGACCGCCAACGCACAAGGAATACATTTGTAGGAACACCTTGCTGGATGGCACCTGAGGTCATGGAGCAACTTCACGGCTACAATTTCAAAGCTGACATCTGGTCGTTTGGTATAACCGCCTTGGAGCTTGCACATGGCCATGCCCCTTTCTCAAAGTTTCCACCAATGAAGGTACTGCTCATGACTCTCCAAAATGCACCCCCTGGCCTTGACTACGAAAGGGATAGGAAGTTCAGTAAGTCTTTTAAGCAGATGATTGCTAGTTGCTTGGTAAAAGATCCTTCAAAACGACCCTCTGCAAGCAAGTTGTTAAAACATTCCTTCTTTAAGCAGGCTCGCTCCAGTGATACTATAGTCAAAAAACTTTTGGAGGGGTTGCCTGCTTTAGGTGACCGAATGGAAGCTCTAAAGAGAAAAGAAGAAGATATGCTCGCACAAAAGAAAATGCCTGATGGAAAGATGGAGGAATTATCACAGAACGAATACAAACGAGGAATTAGTGGTTGGAACTTCAATCTTGACGACATGAAGGCTCAGGCTTCCTTGATCCACGATTTCGACGATGCTATGTCCGATATCAACCATGCAGGAAGTTCAAGTTCTTTATCTACACTTGATTCACTAGATAAGCAATTGCCAAGTGCAATTCACAAACCTTCTCGATCTGCTGATATGGAAGAGAATGATGAGATGCGACGTCAATTAGCTTCTGCTCTCCTAGTTGATTCTGCAGTAAACGATGCCAAAACTAGGTTCGAAAAATCCGATGATGACTCTAGCATCGCCAGTTCAAGCCATGAACCACAAACTTCTTCATCCTGTCCAGATGATCATGTGAACAATCATTTGGGTGAAAAATCTGATATGGAAAATGGTGGAAGATCCGTGGAGGGAATGGCTACCCATTATTATCATAGAAGAGGATGTTCATCCAGCATCTTACCTGAAGCTACTCTTCTTCCTATTCGGGCAGAAAGTGAGAAACCACAAAATCTGCCCCACAACGTTTCAAGTTGCAATGCAACTTCAGTTCCACAGACAGGAGAGGACGTGCTTACCGAACTTCCTTCTAGAGTCTCAAAATCATCAGCTAATTCTGATGACACTGATGAGAAATCAAAGGTGCCAGTTGTACAGCAGAGAGGGCGTTTTAAGGTTACATCTGAGAATGTTGACCCAGAAAAGGTGGCCCCTTCTCCTCTATTGCAAAAGAGCCATAGCATGCAGGTTTTTAGCCAGCATAATACTGCTTCTATACATCCTACTTTGCCATTACTACCGGCATCTGATGCCACATCATCAAATCTTTCTGGCTACTCTCTGTTTCCTGTGTTACACTCTGTACTGCAGACAAATATTCTTCAAAGGGAGGGCATTTTAAGTTTAATGAAGCAAATTACTGTCGGTGACTCTTCAGCTGATGGCACATGCAACCCAGCACAGGTAGCAGCAACAGAGAAATCTTTGCTTGAAGCAGCTCACGAGAGGGAAAAGGAGTTACTTCATGAGATAACAGATTTGCAGTGGAGGCTTATCTGTACCCAGGAGGAGCTTCAAAAGTTGAAAACAGAAAACGCCCAGAAGTGA
>Glyma08g23921.2 sequence type=CDS gene model=Glyma08g23921 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGAAAAGAAGAAGTACCCCATCGGGGAGGAGCATTACCTTCTCTACGAGGAGATTGGCCAGGGGGTCAGTGCCTCTGTCCACCGCGCTCTCTGCCTCCCCTTCAACGAGGTCGTCGCCATCAAAATCCTCGACTTCGAACGTGACAACTGCGATCTGAACAACGTTTCTCGCGAGGCCCAGACAATGATCCTGGTGGACCACCCCAACGTCCTCAAATCCCACTGCTCCTTCGTCAGCGATCACAATCTCTGGGTTGTCATGCCCTTCATGTCCGGCGGTTCATGCCTCCACATACTCAAAGCCGCCCACCCCGACGGTTTCGAGGAGGTGGTCATTGCTACCGTTCTCAAAGAGGTCTTGAAGGGTTTGGAGTACCTTCACCATCACGGCCACATCCACCGCGACGTCAAGGCCGGCAACATTCTCATCGATTCACGCGGGGCCGTCAAGCTCGGCGACTTTGGTGTCTCTGCCTGCCTCTTCGATTCCGGTGACCGCCAACGCACAAGGAATACATTTGTAGGAACACCTTGCTGGATGGCACCTGAGGTCATGGAGCAACTTCACGGCTACAATTTCAAAGCTGACATCTGGTCGTTTGGTATAACCGCCTTGGAGCTTGCACATGGCCATGCCCCTTTCTCAAAGTTTCCACCAATGAAGGTACTGCTCATGACTCTCCAAAATGCACCCCCTGGCCTTGACTACGAAAGGGATAGGAAGTTCAGTAAGTCTTTTAAGCAGATGATTGCTAGTTGCTTGGTAAAAGATCCTTCAAAACGACCCTCTGCAAGCAAGTTGTTAAAACATTCCTTCTTTAAGCAGGCTCGCTCCAGTGATACTATAGTCAAAAAACTTTTGGAGGGGTTGCCTGCTTTAGGTGACCGAATGGAAGCTCTAAAGAGAAAAGAAGAAGATATGCTCGCACAAAAGAAAATGCCTGATGGAAAGATGGAGGAATTATCACAGAACGAATACAAACGAGGAATTAGTGGTTGGAACTTCAATCTTGACGACATGAAGGCTCAGGCTTCCTTGATCCACGATTTCGACGATGCTATGTCCGATATCAACCATGCAGGAAGTTCAAGTTCTTTATCTACACTTGATTCACTAGATAAGCAATTGCCAAGTGCAATTCACAAACCTTCTCGATCTGCTGATATGGAAGAGAATGATGAGATGCGACGTCAATTAGCTTCTGCTCTCCTAGTTGATTCTGCAGTAAACGATGCCAAAACTAGGTTCGAAAAATCCGATGATGACTCTAGCATCGCCAGTTCAAGCCATGAACCACAAACTTCTTCATCCTGTCCAGATGATCATGTGAACAATCATTTGGGTGAAAAATCTGATATGGAAAATGGTGGAAGATCCGTGGAGGGAATGGCTACCCATTATTATCATAGAAGAGGATGTTCATCCAGCATCTTACCTGAAGCTACTCTTCTTCCTATTCGGGCAGAAAGTGAGAAACCACAAAATCTGCCCCACAACGTTTCAAGTTGCAATGCAACTTCAGTTCCACAGACAGGAGAGGACGTGCTTACCGAACTTCCTTCTAGAGTCTCAAAATCATCAGCTAATTCTGATGACACTGATGAGAAATCAAAGGTGCCAGTTGTACAGCAGAGAGGGCGTTTTAAGGTTACATCTGAGAATGTTGACCCAGAAAAGGTGGCCCCTTCTCCTCTATTGCAAAAGAGCCATAGCATGCAGGTTTTTAGCCAGCATAATACTGCTTCTATACATCCTACTTTGCCATTACTACCGGCATCTGATGCCACATCATCAAATCTTTCTGGCTACTCTCTGTTTCCTGTGTTACACTCTGTACTGCAGACAAATATTCTTCAAAGGGAGGGCATTTTAAGTTTAATGAAGCAAATTACTGTCGGTGACTCTTCAGCTGATGGCACATGCAACCCAGCACAGGTAGCAGCAACAGAGAAATCTTTGCTTGAAGCAGCTCACGAGAGGGAAAAGGAGTTACTTCATGAGATAACAGATTTGCAGTGGAGGCTTATCTGTACCCAGGAGGAGCTTCAAAAGTTGAAAACAGAAAACGCCCAGGTGTGA
Predicted protein sequences of Glyma08g23921
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma08g23921.1 sequence type=predicted peptide gene model=Glyma08g23921 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MEKKKYPIGEEHYLLYEEIGQGVSASVHRALCLPFNEVVAIKILDFERDNCDLNNVSREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAHPDGFEEVVIATVLKEVLKGLEYLHHHGHIHRDVKAGNILIDSRGAVKLGDFGVSACLFDSGDRQRTRNTFVGTPCWMAPEVMEQLHGYNFKADIWSFGITALELAHGHAPFSKFPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSASKLLKHSFFKQARSSDTIVKKLLEGLPALGDRMEALKRKEEDMLAQKKMPDGKMEELSQNEYKRGISGWNFNLDDMKAQASLIHDFDDAMSDINHAGSSSSLSTLDSLDKQLPSAIHKPSRSADMEENDEMRRQLASALLVDSAVNDAKTRFEKSDDDSSIASSSHEPQTSSSCPDDHVNNHLGEKSDMENGGRSVEGMATHYYHRRGCSSSILPEATLLPIRAESEKPQNLPHNVSSCNATSVPQTGEDVLTELPSRVSKSSANSDDTDEKSKVPVVQQRGRFKVTSENVDPEKVAPSPLLQKSHSMQVFSQHNTASIHPTLPLLPASDATSSNLSGYSLFPVLHSVLQTNILQREGILSLMKQITVGDSSADGTCNPAQVAATEKSLLEAAHEREKELLHEITDLQWRLICTQEELQKLKTENAQK*
>Glyma08g23921.2 sequence type=predicted peptide gene model=Glyma08g23921 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MEKKKYPIGEEHYLLYEEIGQGVSASVHRALCLPFNEVVAIKILDFERDNCDLNNVSREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAHPDGFEEVVIATVLKEVLKGLEYLHHHGHIHRDVKAGNILIDSRGAVKLGDFGVSACLFDSGDRQRTRNTFVGTPCWMAPEVMEQLHGYNFKADIWSFGITALELAHGHAPFSKFPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSASKLLKHSFFKQARSSDTIVKKLLEGLPALGDRMEALKRKEEDMLAQKKMPDGKMEELSQNEYKRGISGWNFNLDDMKAQASLIHDFDDAMSDINHAGSSSSLSTLDSLDKQLPSAIHKPSRSADMEENDEMRRQLASALLVDSAVNDAKTRFEKSDDDSSIASSSHEPQTSSSCPDDHVNNHLGEKSDMENGGRSVEGMATHYYHRRGCSSSILPEATLLPIRAESEKPQNLPHNVSSCNATSVPQTGEDVLTELPSRVSKSSANSDDTDEKSKVPVVQQRGRFKVTSENVDPEKVAPSPLLQKSHSMQVFSQHNTASIHPTLPLLPASDATSSNLSGYSLFPVLHSVLQTNILQREGILSLMKQITVGDSSADGTCNPAQVAATEKSLLEAAHEREKELLHEITDLQWRLICTQEELQKLKTENAQV*