SoyBase
SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research
SoyBase
SoyBase transitions to NEW site on 10/1/2024
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A newer version of this gene model can be found here:
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|---|---|---|---|---|
| AT1G80310 | AT | Annotation by Michelle Graham. TAIR10: sulfate transmembrane transporters | chr1:30194951-30196345 FORWARD LENGTH=464 | SoyBase | E_val: 0 | ISS |
| GO:0006810 | GO-bp | Annotation by Michelle Graham. GO Biological Process: transport | SoyBase | N/A | ISS |
| GO:0015689 | GO-bp | Annotation by Michelle Graham. GO Biological Process: molybdate ion transport | SoyBase | N/A | ISS |
| GO:0055085 | GO-bp | Annotation by Michelle Graham. GO Biological Process: transmembrane transport | SoyBase | N/A | ISS |
| GO:0090414 | GO-bp | Annotation by Michelle Graham. GO Biological Process: molybdate ion export from vacuole | SoyBase | N/A | ISS |
| GO:0005773 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: vacuole | SoyBase | N/A | ISS |
| GO:0009705 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: plant-type vacuole membrane | SoyBase | N/A | ISS |
| GO:0016021 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: integral to membrane | SoyBase | N/A | ISS |
| GO:0005215 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: transporter activity | SoyBase | N/A | ISS |
| GO:0015098 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: molybdate ion transmembrane transporter activity | SoyBase | N/A | ISS |
| GO:0015116 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: sulfate transmembrane transporter activity | SoyBase | N/A | ISS |
| UniRef100_B9RUY1 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Sulfate transporter, putative n=1 Tax=Ricinus communis RepID=B9RUY1_RICCO | SoyBase | E_val: 0 | ISS |
| UniRef100_I1KVA5 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=2 Tax=Glycine max RepID=I1KVA5_SOYBN | SoyBase | E_val: 0 | ISS |
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Glyma08g22300 not represented in the dataset |
Glyma08g22300 not represented in the dataset |
| Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|---|---|---|
| Glyma.08g208700 | Wm82.a2.v1 | IGC | As supplied by JGI |
| Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma08g22300.1 sequence type=CDS gene model=Glyma08g22300 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGCACCCTCAATCTCCGACGAAATGCCAAGCACCACCACCTCTCTCCTCCGCCGCAACCGGTGGCTCCCCTCCAGCATCAAACTGAAAACAACCCTTTTCTCAGAACTCTCCGGCGCGGTGGGTGACCTAGGCACCTACATCCCCATAGTTCTAGCCTTATCCTTAGTGAACAACTTGGACCTCACCACCACACTGGTCTTCACTGCTCTCTACAACATCGCCACCGGTCTCCTCTTCGGCCTCCCCATGCCGGTCCAGCCCATGAAGTCCATCGCCGCCGTCGCCATCTCCGCAGCGCCCCCCCTCACCATCCCCCAAATCTCGGCCGCTGGCCTCTCCGTCGCCGCCGTGCTCCTCCTCCTCGGTGCCACCGGCCTCATGTCCGTCCTCTACCGCTACCTCCCCCTCCCCGTCGTCCGCGGCGTCCAACTCTCCCAAGGCCTCTCCTTCGCCTTCTCCGCCGTCAAATACATTCGCTACGACCAAGACCTCGCCAAATCAAAATCCGGTCCCCCCCGCCCCTGGCTAGCAGTCGACGGCGTCGCCGTCGCCCTCGCCGCCGTCCTCTTCCTCGTCCTCACCACCGGCGCCGGCGACGAGCCACCTCCACCACCACCACAACAACAAGAAGAAGAAATCGACGATCGCCGTGAAAAAGTTCGGCGGAGGTTGAGGGTTTTGTCTACGATTCCGGCGGCGCTAATAGTGTTTTTGTTCGGCTTAGTGTTGTGTTTTATTCGTGACCCTTCGATTTTCGGAGATCTTAGGTTTGGGCCTTCGAGGATTTCTTTGATTAAGATTACATGGGAGGATTTGAAGATTGGGTTTGTCAGCGCCGCAATTCCGCAAATACCGTTATCCGTTTTGAATTCCGTTATCGCGGTATGTAAGCTGTCCGGGGATTTGTTTCCCGAACGTGAGGCTTCGGCGATGCATGTTTCGGTGAGTGTGGGGCTTATGAATTTTGTAGGGTGTTGGTTCGGAGCCATGCCTTGTTGCCACGGGGCTGGTGGTTTGGCGGGACAGTACAGGTTCGGGGGTAGGAGTGGTGCTTCGGTGGTGTTCCTTGGGATTGCAAAGTTGGTGCTTGCTTTGGTGTTTGGAAACTCTCTTGGCAGAATTTTGGGTCAGTTTCCTATTGGGATTCTGGGAGTGCTTTTGTTGTTTGCGGGAATTGAGTTGGCTATGGCTGCTAAGGATATGAACACTAAACAAGAGTCGTTTGTTATGCTTGTTTGTGCGGCTGTTTCTCTCACTGGATCAAGTGCTGCCTTGGGGTTCTTTGTTGGCATTGTGCTTTACTTGCTCTTGAAATTGAGGGAGGTTGAATGTAGAGGGTTTGGCTTTTGTGGATCAAACCACACCAAGTCTTCTCTTGAGGACGAACAAGCTAGCTTGATTGCCTAG
>Glyma08g22300.1 sequence type=predicted peptide gene model=Glyma08g22300 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MAPSISDEMPSTTTSLLRRNRWLPSSIKLKTTLFSELSGAVGDLGTYIPIVLALSLVNNLDLTTTLVFTALYNIATGLLFGLPMPVQPMKSIAAVAISAAPPLTIPQISAAGLSVAAVLLLLGATGLMSVLYRYLPLPVVRGVQLSQGLSFAFSAVKYIRYDQDLAKSKSGPPRPWLAVDGVAVALAAVLFLVLTTGAGDEPPPPPPQQQEEEIDDRREKVRRRLRVLSTIPAALIVFLFGLVLCFIRDPSIFGDLRFGPSRISLIKITWEDLKIGFVSAAIPQIPLSVLNSVIAVCKLSGDLFPEREASAMHVSVSVGLMNFVGCWFGAMPCCHGAGGLAGQYRFGGRSGASVVFLGIAKLVLALVFGNSLGRILGQFPIGILGVLLLFAGIELAMAAKDMNTKQESFVMLVCAAVSLTGSSAALGFFVGIVLYLLLKLREVECRGFGFCGSNHTKSSLEDEQASLIA*
| Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||
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