Report for Sequence Feature Glyma08g21260
Feature Type: gene_model
Chromosome: Gm08
Start: 16144688
stop: 16147896
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma08g21260
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT1G51800 AT
Annotation by Michelle Graham. TAIR10: Leucine-rich repeat protein kinase family protein | chr1:19214203-19217833 FORWARD LENGTH=894
SoyBase E_val: 5.00E-159 ISS
GO:0002679 GO-bp
Annotation by Michelle Graham. GO Biological Process: respiratory burst involved in defense response
SoyBase N/A ISS
GO:0006468 GO-bp
Annotation by Michelle Graham. GO Biological Process: protein phosphorylation
SoyBase N/A ISS
GO:0006569 GO-bp
Annotation by Michelle Graham. GO Biological Process: tryptophan catabolic process
SoyBase N/A ISS
GO:0006857 GO-bp
Annotation by Michelle Graham. GO Biological Process: oligopeptide transport
SoyBase N/A ISS
GO:0006865 GO-bp
Annotation by Michelle Graham. GO Biological Process: amino acid transport
SoyBase N/A ISS
GO:0009684 GO-bp
Annotation by Michelle Graham. GO Biological Process: indoleacetic acid biosynthetic process
SoyBase N/A ISS
GO:0010200 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to chitin
SoyBase N/A ISS
GO:0015824 GO-bp
Annotation by Michelle Graham. GO Biological Process: proline transport
SoyBase N/A ISS
GO:0050832 GO-bp
Annotation by Michelle Graham. GO Biological Process: defense response to fungus
SoyBase N/A ISS
GO:0005886 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane
SoyBase N/A ISS
GO:0004672 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein kinase activity
SoyBase N/A ISS
GO:0004674 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein serine/threonine kinase activity
SoyBase N/A ISS
GO:0005524 GO-mf
Annotation by Michelle Graham. GO Molecular Function: ATP binding
SoyBase N/A ISS
GO:0016301 GO-mf
Annotation by Michelle Graham. GO Molecular Function: kinase activity
SoyBase N/A ISS
GO:0016772 GO-mf
Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring phosphorus-containing groups
SoyBase N/A ISS
PTHR24420 Panther
FAMILY NOT NAMED
JGI ISS
PTHR24420:SF417 Panther
SUBFAMILY NOT NAMED
JGI ISS
PF00560 PFAM
Leucine Rich Repeat
JGI ISS
UniRef100_G7LGQ9 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Kinase-like protein n=1 Tax=Medicago truncatula RepID=G7LGQ9_MEDTR
SoyBase E_val: 0 ISS
UniRef100_I1KUZ5 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1KUZ5_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma08g21260
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Gene model name correspondences to Glyma08g21260 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
References for Glyma08g21260
Coding sequences of Glyma08g21260
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma08g21260.1 sequence type=CDS gene model=Glyma08g21260 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGATGGGAATGTTATTGCAGTTTCTTTATGTATTGTTTGGGGTACTTATTTCTGTGGTTCTGGTTCAAGCACAGGATCAATCAGGATTCATTAGCATTGATTGTGGTCTACCTGAATCCTCAAGCTATACTGAGAAGACCACAAGCATATTTTACATTTCAGATGCCAAATTTATAGATGCTGGTGTAAGCAAGAGTATTTCACCAGCAGAGAAGAGTACTCATCTACAACAGCTAGCATATGTGAGGAGTTTTCCTAGTGGAGAGAGAAACTGTTACAGAATAAATGTAACCAGTGGTACTAAATATTTGATCAGAGCTACTTTCTTTTATGGAAACTATGATGGCCTCAATCAGCCACCACAATTTGATCTTCATCTTGGACCTAATTTATGGGACACAGTGAGCTTCCCCAATGCATCACTCAGCGAAATCAGTGAAATCATTTACACCCCATCACTAGATTACATACATCCATGTCTTGTTAACAAAGGTCAAGGGGCTCCATTCATTTCAACCATAGAATTGAGGACTTTGAAAAATGCTTCCTATGTCACAGCGTCAGCTGAATCATTGGCATACTATCGGCGATATGATTTAGGTTCCATCACCAACTTAGTATACAGGTACAACTATGATGTTTATGACCGCATCTGGGTGCCACATGGATTCAACCAGTGGACACAATTAAGCAGCACACTTAATCATGATATATTCCAGAATGATTACAAATTACCAGAAGTTGTCATGAGCACTGCTGCTACACCAATAAATGCTAGTGCTCCATTTCAGTTCTATTGGGATCCAGATAATGTGAATGAGAAATTCTACATCTACATGCACTTTAACGAGGTTAAAATTCTGGCAGAAAATGAAACTAGAACATTCAATATCTTCATGAATGGCAAGTTATTCTATGGACCTCTGACTCCTGGATATCTGACGAAAAATATCATATATAGTACATCAGCTTTGACCGGAGCTACAAGGTATCTATTTTCTCTTGCTAAGACAGGGACTTCTACCCTTCCACCCATCATGAATGCCATGGAGATTTATAAAGTAATAGATTTTGCTCAATCAGAAACTGAACAAGATGATGTTGATGCTATCACAAACATCAAAAACGCTTATGGGGTGGATAGAAATTGGCAAGGAGATCCATGTGGCCCAGTAGCATACATTTGGGAAGGTCTAAATTGTAGTTATGATAACACCCCAAGAATCACATCCTTGAATTTGTCTTCAAGTGGACTGACCGGACAGATATTATCTTTCATCTCCGAGCTCACTATGTTACAGTATTTGGATTTATCAAACAATAGTTTAAGCGGGTCAGTACCTGATTTTCTGACACAACTGCAATCACTTAAAGTCTTAAACTTGGCGAAAAACAACCTTACTGGTCCAGTTCCCGGAGGACTTGTTGAAAGATCAAAGCAAGGTTCACTATCATTGAGCCTGGATCAAAATCCAAATCTATGTGAATCTGATCCATGCATCCAGCAGACAAATAACAAGCAGCCAGATGGTGATCAACAGAAGAACAAAAATAATATAGTTATCCCGGTAGTAGCATCAGTTGCTGGGGTTTTGGTGCTCCTAATAATTGTAGCAGCAGCTATAATCTGTGGCCTTAAAAGGAAAAAACCACAAGGTAAAGCTGTTGCTAACTACCTTTTTTGGTTTGTTTCCATGTTCTGA
Predicted protein sequences of Glyma08g21260
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma08g21260.1 sequence type=predicted peptide gene model=Glyma08g21260 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MMGMLLQFLYVLFGVLISVVLVQAQDQSGFISIDCGLPESSSYTEKTTSIFYISDAKFIDAGVSKSISPAEKSTHLQQLAYVRSFPSGERNCYRINVTSGTKYLIRATFFYGNYDGLNQPPQFDLHLGPNLWDTVSFPNASLSEISEIIYTPSLDYIHPCLVNKGQGAPFISTIELRTLKNASYVTASAESLAYYRRYDLGSITNLVYRYNYDVYDRIWVPHGFNQWTQLSSTLNHDIFQNDYKLPEVVMSTAATPINASAPFQFYWDPDNVNEKFYIYMHFNEVKILAENETRTFNIFMNGKLFYGPLTPGYLTKNIIYSTSALTGATRYLFSLAKTGTSTLPPIMNAMEIYKVIDFAQSETEQDDVDAITNIKNAYGVDRNWQGDPCGPVAYIWEGLNCSYDNTPRITSLNLSSSGLTGQILSFISELTMLQYLDLSNNSLSGSVPDFLTQLQSLKVLNLAKNNLTGPVPGGLVERSKQGSLSLSLDQNPNLCESDPCIQQTNNKQPDGDQQKNKNNIVIPVVASVAGVLVLLIIVAAAIICGLKRKKPQGKAVANYLFWFVSMF*