Glyma08g19700 - SoyBase

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Report for Sequence Feature Glyma08g19700

Feature Type:	gene_model
Chromosome:	Gm08
Start:	14879999
stop:	14888529
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma08g19700

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT5G24750	AT	Annotation by Michelle Graham. TAIR10: UDP-Glycosyltransferase superfamily protein \| chr5:8490821-8494536 REVERSE LENGTH=520	SoyBase	E_val: 0	ISS
GO:0008152	GO-bp	Annotation by Michelle Graham. GO Biological Process: metabolic process	SoyBase	N/A	ISS
GO:0005737	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm	SoyBase	N/A	ISS
GO:0016758	GO-mf	Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring hexosyl groups	SoyBase	N/A	ISS
KOG1192	KOG	UDP-glucuronosyl and UDP-glucosyl transferase	JGI		ISS
PTHR11926	Panther	GLUCOSYL/GLUCURONOSYL TRANSFERASES	JGI		ISS
PTHR11926:SF64	Panther	GLYCOSYL TRANSFERASE FAMILY 28	JGI		ISS
UniRef100_F4KII1	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Sterol glucosyltransferase-like protein n=1 Tax=Arabidopsis thaliana RepID=F4KII1_ARATH	SoyBase	E_val: 0	ISS
UniRef100_UPI000233913C	UniRef	Annotation by Michelle Graham. Best UniRef hit: UPI000233913C related cluster n=1 Tax=unknown RepID=UPI000233913C	SoyBase	E_val: 0	ISS

Expression Patterns of Glyma08g19700

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma08g19700 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.08g184700	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma08g19700

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma08g19700

Limit To All Plant Sequences

>Glyma08g19700.2   sequence type=CDS   gene model=Glyma08g19700   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGAGAGAAGGAAGCCGAAAGCAGTGTTCATGGCCTTCGGCACTAAAGGCGATGTCTACCCTCTTGCAGCCATTGCTGCAGCTTTTGCTCGTGACCAGAAACAGTATGATGTGATGCTAATAACTCACTCAGCACACGAGAGCTTGAGTACTCACTTGGCTGAAAAACATGTTCAATATTGCCCAGTTTCATCACCCCCAGTTCTATGTGCCGATCAGAATAATGATACTGAAGGGAAAGCAGAGTCATCTTTTTTCTTGCAGAAAAAGAAAGTTACAAGAGATCTTAGACAAGAATGCTATGCTTTAATTGAAAGGATATTTGGAGATGGCCCAGGCTTGGACGGTGATCTTATCGTGATAAACTTTTTTGCTTTGGAAGGGTGGAGCCTTGCAGAAAGTTTTTGTGTCCGTTGCATTGTAGCTGCTCCTTATGTTGTTCCATACAGTGCACCTGCAACATTTGAAAGCCAATTCCAAATAGAGCTTCCTCTTTTGTATAAATACCTCATTGATGCTCCTTCTGGTAAGGTCTGCTGGAAGGATGTTATTCATTGGATGTGGCCCCTTTTCACAGAAAATTGGGGATCATGGAGAAATGATGTCTTGCATCTTAGTCCATGTCCTTTTACTGATCCAGTAACAGGTATTCCTACTTGGCATGATAGACCACAATCTCCACTTGTGATGTATGGTTTTAGTAAAGAAGTAGTTGAATGTCCTGAATATTGGCCATCGAAAGTGCTAGTCTGTGGATTTTGGTTCCTCCCTATTGAATGGCAGTTTACTTGTAAGAAATGCAGAAAAATTTCATTACATGATTCATCAGATGACTTGTGTCCCAGTCATTTAGAGTTGCAAAACTTTATAAAGACTACACCAATTTTTATTGGACTGAGTTCTATTGGAAGCATGGGTTTTTTAAAAAACCCTTATGCATTTATTTGTGTTCTTCAGACTGTCCTGAGCACCACAAATTACAGATTTATTCTATTTACAGCAAGATATGAACCCTTAGAATCAATAGTCCGTACCATTGCTGCTGAAGCATCATTTGAGCAGAAAAAATGGAGTGACGATTGTGTCCCTCTTTGTAATGGACGGCTATTGTGTTTTTCTGGTTCCGTACCATATGGTTGGCTTTTCCCAAAATGTGCTGCTGTAATTCACCACGGAGGCAGTGGAACTACTGCTGCTGCATTACAGGCAGGCACACCACAGGTAGTATGCCCTTTCATTCTAGATCAGTTTTATTGGGCTGAGAGAATGCATTGGCTTGGTGTTTCACCTGAACCACTCAGTAGAAATCATTTGCTGCCTGATAAAAATGATAACACGAGTATCCACGAAGCTGCGCGTGTACTATCACTGGCAATCCATGATGCATTATCATCAACAGTTAAAGCAAGGGCAGCAGAAATTGCTGAAAGAATATTGCTTGAGTGTTCCACAACGTGGTGGCAGTGCAGTGGGAGGCTGATTACAAAGAATGCAATTCTGCAAAAAGATCAAGTAAAGGTGTATTTTTTTTATTAA

Predicted protein sequences of Glyma08g19700

Limit To All Plant Sequences

>Glyma08g19700.2   sequence type=predicted peptide   gene model=Glyma08g19700   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MERRKPKAVFMAFGTKGDVYPLAAIAAAFARDQKQYDVMLITHSAHESLSTHLAEKHVQYCPVSSPPVLCADQNNDTEGKAESSFFLQKKKVTRDLRQECYALIERIFGDGPGLDGDLIVINFFALEGWSLAESFCVRCIVAAPYVVPYSAPATFESQFQIELPLLYKYLIDAPSGKVCWKDVIHWMWPLFTENWGSWRNDVLHLSPCPFTDPVTGIPTWHDRPQSPLVMYGFSKEVVECPEYWPSKVLVCGFWFLPIEWQFTCKKCRKISLHDSSDDLCPSHLELQNFIKTTPIFIGLSSIGSMGFLKNPYAFICVLQTVLSTTNYRFILFTARYEPLESIVRTIAAEASFEQKKWSDDCVPLCNGRLLCFSGSVPYGWLFPKCAAVIHHGGSGTTAAALQAGTPQVVCPFILDQFYWAERMHWLGVSPEPLSRNHLLPDKNDNTSIHEAARVLSLAIHDALSSTVKARAAEIAERILLECSTTWWQCSGRLITKNAILQKDQVKVYFFY*

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