Report for Sequence Feature Glyma08g18891
Feature Type: gene_model
Chromosome: Gm08
Start: 14269130
stop: 14270134
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma08g18891
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
UniRef100_UPI00023386DF UniRef
Annotation by Michelle Graham. Best UniRef hit: UPI00023386DF related cluster n=1 Tax=unknown RepID=UPI00023386DF
SoyBase E_val: 9.00E-71 ISS
Expression Patterns of Glyma08g18891
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma08g18891
Paralog Evidence Comments
Glyma15g06131 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma08g18891 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.08g177200 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma08g18891
Coding sequences of Glyma08g18891
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma08g18891.1 sequence type=CDS gene model=Glyma08g18891 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGGTCGTACCTATGTTCTTATGATGGTTGCTGCATTGTTGTTGAGCTCCACCATGGCTCAATCTCCAGCTTCGTCGCCGGCTTTGTCCCCCACCCACACGCCGGTGGCCACTCCACCTAGGAGGGCGTTGTCGCCGTCTCCGTCGTCTGTGTCACCAGCGGCTTCACCCGCCACCGGAAATTCTCCTCCGGCACCACCTACTTCTTCTCCTTCGGAATCGCCACTTCCATCAGCTGCTACTCCCAACATCTCTCCCTCGACCATCTCGACTCCGCCATCTGAAGGACCAGCTGCAAACGGTGCCGTTTTCAACAGAGTTTCCGGATCTGCTCTGCTTCTCATTTTCGCTGCGGCTATACTCATATAA
Predicted protein sequences of Glyma08g18891
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma08g18891.1 sequence type=predicted peptide gene model=Glyma08g18891 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MGRTYVLMMVAALLLSSTMAQSPASSPALSPTHTPVATPPRRALSPSPSSVSPAASPATGNSPPAPPTSSPSESPLPSAATPNISPSTISTPPSEGPAANGAVFNRVSGSALLLIFAAAILI*