Glyma08g18671 - SoyBase

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Report for Sequence Feature Glyma08g18671

Feature Type:	gene_model
Chromosome:	Gm08
Start:	14045059
stop:	14045680
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma08g18671

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT1G17180	AT	Annotation by Michelle Graham. TAIR10: glutathione S-transferase TAU 25 \| chr1:5872208-5872958 FORWARD LENGTH=221	SoyBase	E_val: 6.00E-53	ISS
GO:0009407	GO-bp	Annotation by Michelle Graham. GO Biological Process: toxin catabolic process	SoyBase	N/A	ISS
GO:0010583	GO-bp	Annotation by Michelle Graham. GO Biological Process: response to cyclopentenone	SoyBase	N/A	ISS
GO:0005737	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm	SoyBase	N/A	ISS
GO:0004364	GO-mf	Annotation by Michelle Graham. GO Molecular Function: glutathione transferase activity	SoyBase	N/A	ISS
KOG0406	KOG	Glutathione S-transferase	JGI		ISS
PTHR11260	Panther	GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING	JGI		ISS
PTHR11260:SF54	Panther	SUBFAMILY NOT NAMED	JGI		ISS
PF00043	PFAM	Glutathione S-transferase, C-terminal domain	JGI		ISS
PF02798	PFAM	Glutathione S-transferase, N-terminal domain	JGI		ISS
UniRef100_Q9FQE2	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Glutathione S-transferase GST 16 n=1 Tax=Glycine max RepID=Q9FQE2_SOYBN	SoyBase	E_val: 2.00E-87	ISS
UniRef100_UPI000233857B	UniRef	Annotation by Michelle Graham. Best UniRef hit: UPI000233857B related cluster n=1 Tax=unknown RepID=UPI000233857B	SoyBase	E_val: 3.00E-96	ISS

Expression Patterns of Glyma08g18671

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma08g18671 not represented in the dataset	Glyma08g18671 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma08g18671 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments

References for Glyma08g18671

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma08g18671

Limit To All Plant Sequences

>Glyma08g18671.1   sequence type=CDS   gene model=Glyma08g18671   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAACCCAGTTCACAAAAAGATTCCAGTTCTCATACATCATGGAAGACCAATCTGTGAGTCTCTCATAATTGTTGAGTATATTGATATAGTTTGGCACAATAATTGTCCTTTGCTTCCCTCTGCTCTCTACCATAAAGCTCAAGCCAGGTTCTGGGCTGATTTTGTAGATCAGAAGGAGTTTCATGGAGACAAGCCTTATTTTGGGGGTGACACATTTAGATTTGTTGATGTAGCTCTCATTCCTTTCTATTGCTGGTTTTATACTTATGAGACCTTTGGAAACTTCAAAGTGGAGGGAAAGTGCCCAAAACTTATCTCCTGGGCCAAGAGATGCATGCAGAAGGAAAGTGTATCAGAAACTCTTGCAGATGAGAGGGAGGTTTATGTGGCTGTTTTGGATTATAAGAACAAATTTATATTGAACTAA

Predicted protein sequences of Glyma08g18671

Limit To All Plant Sequences

>Glyma08g18671.1   sequence type=predicted peptide   gene model=Glyma08g18671   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MNPVHKKIPVLIHHGRPICESLIIVEYIDIVWHNNCPLLPSALYHKAQARFWADFVDQKEFHGDKPYFGGDTFRFVDVALIPFYCWFYTYETFGNFKVEGKCPKLISWAKRCMQKESVSETLADEREVYVAVLDYKNKFILN*

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