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Report for Sequence Feature Glyma08g18671

Feature Type:gene_model
Chromosome:Gm08
Start:14045059
stop:14045680
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma08g18671
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G17180AT Annotation by Michelle Graham. TAIR10: glutathione S-transferase TAU 25 | chr1:5872208-5872958 FORWARD LENGTH=221 SoyBaseE_val: 6.00E-53ISS
GO:0009407GO-bp Annotation by Michelle Graham. GO Biological Process: toxin catabolic process SoyBaseN/AISS
GO:0010583GO-bp Annotation by Michelle Graham. GO Biological Process: response to cyclopentenone SoyBaseN/AISS
GO:0005737GO-cc Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm SoyBaseN/AISS
GO:0004364GO-mf Annotation by Michelle Graham. GO Molecular Function: glutathione transferase activity SoyBaseN/AISS
KOG0406 KOG Glutathione S-transferase JGI ISS
PTHR11260Panther GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING JGI ISS
PTHR11260:SF54Panther SUBFAMILY NOT NAMED JGI ISS
PF00043PFAM Glutathione S-transferase, C-terminal domain JGI ISS
PF02798PFAM Glutathione S-transferase, N-terminal domain JGI ISS
UniRef100_Q9FQE2UniRef Annotation by Michelle Graham. Most informative UniRef hit: Glutathione S-transferase GST 16 n=1 Tax=Glycine max RepID=Q9FQE2_SOYBN SoyBaseE_val: 2.00E-87ISS
UniRef100_UPI000233857BUniRef Annotation by Michelle Graham. Best UniRef hit: UPI000233857B related cluster n=1 Tax=unknown RepID=UPI000233857B SoyBaseE_val: 3.00E-96ISS

Expression Patterns of Glyma08g18671
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma08g18671 not represented in the dataset
Glyma08g18671 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma08g18671 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments

References for Glyma08g18671
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma08g18671
>Glyma08g18671.1   sequence type=CDS   gene model=Glyma08g18671   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAACCCAGTTCACAAAAAGATTCCAGTTCTCATACATCATGGAAGACCAATCTGTGAGTCTCTCATAATTGTTGAGTATATTGATATAGTTTGGCACAATAATTGTCCTTTGCTTCCCTCTGCTCTCTACCATAAAGCTCAAGCCAGGTTCTGGGCTGATTTTGTAGATCAGAAGGAGTTTCATGGAGACAAGCCTTATTTTGGGGGTGACACATTTAGATTTGTTGATGTAGCTCTCATTCCTTTCTATTGCTGGTTTTATACTTATGAGACCTTTGGAAACTTCAAAGTGGAGGGAAAGTGCCCAAAACTTATCTCCTGGGCCAAGAGATGCATGCAGAAGGAAAGTGTATCAGAAACTCTTGCAGATGAGAGGGAGGTTTATGTGGCTGTTTTGGATTATAAGAACAAATTTATATTGAACTAA
Predicted protein sequences of Glyma08g18671
>Glyma08g18671.1   sequence type=predicted peptide   gene model=Glyma08g18671   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MNPVHKKIPVLIHHGRPICESLIIVEYIDIVWHNNCPLLPSALYHKAQARFWADFVDQKEFHGDKPYFGGDTFRFVDVALIPFYCWFYTYETFGNFKVEGKCPKLISWAKRCMQKESVSETLADEREVYVAVLDYKNKFILN*






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