Report for Sequence Feature Glyma08g18590
Feature Type: gene_model
Chromosome: Gm08
Start: 13988256
stop: 13994062
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma08g18590
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT1G72250 AT
Annotation by Michelle Graham. TAIR10: Di-glucose binding protein with Kinesin motor domain | chr1:27192902-27198118 FORWARD LENGTH=1203
SoyBase E_val: 0 ISS
GO:0000226 GO-bp
Annotation by Michelle Graham. GO Biological Process: microtubule cytoskeleton organization
SoyBase N/A ISS
GO:0000911 GO-bp
Annotation by Michelle Graham. GO Biological Process: cytokinesis by cell plate formation
SoyBase N/A ISS
GO:0006306 GO-bp
Annotation by Michelle Graham. GO Biological Process: DNA methylation
SoyBase N/A ISS
GO:0006342 GO-bp
Annotation by Michelle Graham. GO Biological Process: chromatin silencing
SoyBase N/A ISS
GO:0006346 GO-bp
Annotation by Michelle Graham. GO Biological Process: methylation-dependent chromatin silencing
SoyBase N/A ISS
GO:0007018 GO-bp
Annotation by Michelle Graham. GO Biological Process: microtubule-based movement
SoyBase N/A ISS
GO:0009909 GO-bp
Annotation by Michelle Graham. GO Biological Process: regulation of flower development
SoyBase N/A ISS
GO:0016458 GO-bp
Annotation by Michelle Graham. GO Biological Process: gene silencing
SoyBase N/A ISS
GO:0031047 GO-bp
Annotation by Michelle Graham. GO Biological Process: gene silencing by RNA
SoyBase N/A ISS
GO:0031048 GO-bp
Annotation by Michelle Graham. GO Biological Process: chromatin silencing by small RNA
SoyBase N/A ISS
GO:0034968 GO-bp
Annotation by Michelle Graham. GO Biological Process: histone lysine methylation
SoyBase N/A ISS
GO:0048451 GO-bp
Annotation by Michelle Graham. GO Biological Process: petal formation
SoyBase N/A ISS
GO:0048453 GO-bp
Annotation by Michelle Graham. GO Biological Process: sepal formation
SoyBase N/A ISS
GO:0051322 GO-bp
Annotation by Michelle Graham. GO Biological Process: anaphase
SoyBase N/A ISS
GO:0051567 GO-bp
Annotation by Michelle Graham. GO Biological Process: histone H3-K9 methylation
SoyBase N/A ISS
GO:0005737 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm
SoyBase N/A ISS
GO:0003777 GO-mf
Annotation by Michelle Graham. GO Molecular Function: microtubule motor activity
SoyBase N/A ISS
GO:0005524 GO-mf
Annotation by Michelle Graham. GO Molecular Function: ATP binding
SoyBase N/A ISS
KOG0239
KOG
Kinesin (KAR3 subfamily)
JGI ISS
PTHR24115 Panther
FAMILY NOT NAMED
JGI ISS
PTHR24115:SF171 Panther
SUBFAMILY NOT NAMED
JGI ISS
PF00225 PFAM
Kinesin motor domain
JGI ISS
UniRef100_G7IJ61 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Kinesin-4 n=1 Tax=Medicago truncatula RepID=G7IJ61_MEDTR
SoyBase E_val: 0 ISS
UniRef100_UPI0002338E50 UniRef
Annotation by Michelle Graham. Best UniRef hit: UPI0002338E50 related cluster n=1 Tax=unknown RepID=UPI0002338E50
SoyBase E_val: 0 ISS
Expression Patterns of Glyma08g18590
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma08g18590
Paralog Evidence Comments
Glyma15g40350 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma08g18590 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.08g174300 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma08g18590
Coding sequences of Glyma08g18590
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma08g18590.1 sequence type=CDS gene model=Glyma08g18590 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGAGGATAATAATCAATGGTGTCTCTATGACCATGACCCACTTCTTCTCACAGACGTTTCTTTGCAGCAAGAATCCTCTTCTTATACTCACAGCCCCAATTCTCTTTCACAAGCATCACTGAGCTCTCGGAGTTTGGCTATGGCGGATGAGCCTGTGTCTCGTGGTGACAGCCCCAGCATCGGGTTTTCTCAGGAAAATGGAAGATTTGAAGGGAACAGCGTGAAATTCGATGACCCAAATGTGAAAAATGTGTTTGATGGAAGATCAATTTTGGGGTATTCTCTTACATCCCCAGATTTGGTCATTTGTGGCTCACCAGATATTGCTGGAATCAGCTATGGTGATTCCCCTGAGTTGTCGAAGAACAAACATTCCAAGGATGTGGAGCAATCTATGGAGCTTTCTCTAGAGAATGGAATCAAGGGGTCTCAAGTAGAAGTTGACAATGGCCATAAGATCCCAACTGTTAAATTCTCCAACTTCTGTCAAACTTTTGAGCAAGAGGAAAAGCCACTGTCCCCTGAAGCCTCCTTTGAGCTTCTTCCACCTCTTGTAACCAGGAATGAGTCACCCCAAGATCACCCTCCTAGAGATACTGAGATGCTTGAAGATATTGGAGTGTCTCAGGAGGCAGAAATGGAGTCTTCAGAAGATACCGAGGATATTGGGATGGAAGAGAAGTTTAAGAGACTGAAAAGAGAGTTTGACTGTCAGAGAAAGGAGCTGACGGAAACAAGGAGGGAGTTGGGGGAGATCAAGAGAGAGAATCAACAGAAGAGTAGAGAATGCCAAGAAGCTTGGAACTCCTTGAAAGAACTTCAAAATGAGCTAATGCGCAAGTCCATGCACGTTGGATCTTTGGCATTTGCCATTGAGGGGCAAGTGAAGGAGAAAAGTAAGTGGTTTTCATCACTGAGAGACTTGACGAGGAAATTGAAGATCATGAAAATGGAACACATCAAGCTATTAGAGGAAGCAGAGGCAAGCAAAAAATATCAAGCAGATATGAGAGAAATGGGACTTATTATCAAGTCCAAAATAAATGAACAGCTGGAGTCACATGAAGATCTCAAGTCCAAATATATTGAAGGGGCTAAGGAACGGAAAGATCTTTACAACAAGGTTTTGGAGTTGACAGGAAACATAAGGGTCTTTTGCCGTTGTAGGCCTCTCAATGCCGAAGAGATATCTGCAGGAGCAACAATGGCCTTAGATTTTGAATTTGCGAAAGATGGTGATTTAACTGTAATGTCAAATGGAGCTCCTAAAAGGAATTTCAAGTTCGATGCTGTCTTTGGTCCCCAAGCTGAGCAAGCTGATATTTTTGAAGACACAGCACCATTTGCAACCTCAGTTCTAGATGGATACAATGTATGCATTTTTGCATATGGACAGACTGGGACAGGAAAAACTTTCACAATGGAGGGCACAGAAGAGGCTCGAGGTGTTAATTTCAGGACTCTTGAGAAAATGTTTGACATAATCAAGGAGAGACAAAAGCTCTATTGTTATGATATCTCTGTAAGTGTCTTAGAAGTGTACAATGAACAAATAAGAGATTTGCTGGTTGCGGGAAATCATCCTGGAACAGCTGCAAAAAGACTTGAAATAAGGCAAGCTGGTGAAGGAATGCATCACATTCCAGGGTTAGTTGAAGCACATGTGAACAATATGACTGAAGTCTGGGAAGTCCTACAAACTGGTAGCAATGCAAGGGCAGTAAGCTCAACCAATGCCAATGAGCATAGCAGCCGATCTCACTGCATTCACTGTGTTATGGTTAAGGGAGAGAATTTGTTGAATGGGGAATGCACAAGAAGCAAGTTATGGCTGGTGGACCTAGCAGGCAGCGAGCGAGTGGCAAAGACAGAAGTGCATGGTGATAGACTGAAGGAGACACAAAATATTAATAGGTCTCTCTCTGCACTTGGTGATGTCATATCAGCTCTTGCAACAAAAAGTTCACACATTCCTTTCAGGAACTCCAAGCTTACACACTTGCTGCAAGACTCATTAGGAGGAGATTCAAAGGCACTCATGTTTGTACAGATCAGTCCTAATGAAAACGATTTGAGTGAGACAATTTGCTCTCTGAACTTTGCTAGTAGAGTAAGAGGAATAGAATTGGGACCTGCAAGAAAGCAGTTGGACACTGTTGAACTTTTGAGACACAAACAAATGGCTGAGAAAGTCAAACAAGAGGTAAGGCTGAAGGATTTGCAAATCAAGAAGATGGAGGAAACAATCCATGGATTGGAGTCCAAGATGAAGGAAAGCGACAATAAGAACAAAAATCTCCAAGAGAAGGTCAAGGAACTGGAATCACAACTTCTGGTTGAGAGAAAGCTGGCGCGTCAACATGTAGACTCAAAGATAGCTGAGCAGCACCAAATGAAACATCAAGAAGAGCAAAACAATACACTTATGAGACCAGCACTTGCAAGTAGACCACTAGGAAGTCTCAAGAATTTCAATGATCCAGTGAGTGGTGGTGGATGGTGCAAAGACCAACAAATAAATTCAGCTAAACCACTCGCTGAGAACAACATCTTGAAACCTTGTATACCCTTTTCTACAATGGAGAGCTCCATCAAGTGCATTGATCATGCTGAGAAAGAAAACAATCCTGACATGGCTGACAAGGCTCTATTGCCAAAAAGGCCTGGAAGAGCTTCTACTATATGCATGATGACACCGCGTGTTCCTTCAGCCATTGCCTCAAGGAGAAACTCTCTGATTCCACTCCCAAGTATACCTAGCTTAACACAGTTCCAGTCACCATTATTACCAAAGTTAACAAACCAAGCTGATCAGAAGGATGTCAATGGGGAATTAGAAACCAACTGTGTGCCTGCACAGACTCATTGTGAGAGTCCCAAAGAAGTTAGAATTGGTGTTAAGAGGATTGGTAGCATACTAAGAAGAAGCCTTCATAAGAAAATACAGATGAAGTCTCCTCTTCAGCAGCACATGAGGAAGGTTGGTGTGAATGTAGGGATGGAGAAAGTTAGAGTTTCCATTGGAAGTAGGGGGAGATTGGCACCAAGGGGCCAAGTAGGAAGTGGTAGAAGAGGAGGAGGAGCTAAAGATATTCAACAAAAGAATAGTCAAAAGGAGAAGGAAAGGGGATGGATTTGA
Predicted protein sequences of Glyma08g18590
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma08g18590.1 sequence type=predicted peptide gene model=Glyma08g18590 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MEDNNQWCLYDHDPLLLTDVSLQQESSSYTHSPNSLSQASLSSRSLAMADEPVSRGDSPSIGFSQENGRFEGNSVKFDDPNVKNVFDGRSILGYSLTSPDLVICGSPDIAGISYGDSPELSKNKHSKDVEQSMELSLENGIKGSQVEVDNGHKIPTVKFSNFCQTFEQEEKPLSPEASFELLPPLVTRNESPQDHPPRDTEMLEDIGVSQEAEMESSEDTEDIGMEEKFKRLKREFDCQRKELTETRRELGEIKRENQQKSRECQEAWNSLKELQNELMRKSMHVGSLAFAIEGQVKEKSKWFSSLRDLTRKLKIMKMEHIKLLEEAEASKKYQADMREMGLIIKSKINEQLESHEDLKSKYIEGAKERKDLYNKVLELTGNIRVFCRCRPLNAEEISAGATMALDFEFAKDGDLTVMSNGAPKRNFKFDAVFGPQAEQADIFEDTAPFATSVLDGYNVCIFAYGQTGTGKTFTMEGTEEARGVNFRTLEKMFDIIKERQKLYCYDISVSVLEVYNEQIRDLLVAGNHPGTAAKRLEIRQAGEGMHHIPGLVEAHVNNMTEVWEVLQTGSNARAVSSTNANEHSSRSHCIHCVMVKGENLLNGECTRSKLWLVDLAGSERVAKTEVHGDRLKETQNINRSLSALGDVISALATKSSHIPFRNSKLTHLLQDSLGGDSKALMFVQISPNENDLSETICSLNFASRVRGIELGPARKQLDTVELLRHKQMAEKVKQEVRLKDLQIKKMEETIHGLESKMKESDNKNKNLQEKVKELESQLLVERKLARQHVDSKIAEQHQMKHQEEQNNTLMRPALASRPLGSLKNFNDPVSGGGWCKDQQINSAKPLAENNILKPCIPFSTMESSIKCIDHAEKENNPDMADKALLPKRPGRASTICMMTPRVPSAIASRRNSLIPLPSIPSLTQFQSPLLPKLTNQADQKDVNGELETNCVPAQTHCESPKEVRIGVKRIGSILRRSLHKKIQMKSPLQQHMRKVGVNVGMEKVRVSIGSRGRLAPRGQVGSGRRGGGAKDIQQKNSQKEKERGWI*