|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT2G43000 | AT | Annotation by Michelle Graham. TAIR10: NAC domain containing protein 42 | chr2:17880617-17882584 REVERSE LENGTH=275 | SoyBase | E_val: 5.00E-23 | ISS |
GO:0005992 | GO-bp | Annotation by Michelle Graham. GO Biological Process: trehalose biosynthetic process | SoyBase | N/A | ISS |
GO:0006561 | GO-bp | Annotation by Michelle Graham. GO Biological Process: proline biosynthetic process | SoyBase | N/A | ISS |
GO:0007275 | GO-bp | Annotation by Michelle Graham. GO Biological Process: multicellular organismal development | SoyBase | N/A | ISS |
GO:0009627 | GO-bp | Annotation by Michelle Graham. GO Biological Process: systemic acquired resistance | SoyBase | N/A | ISS |
GO:0009718 | GO-bp | Annotation by Michelle Graham. GO Biological Process: anthocyanin-containing compound biosynthetic process | SoyBase | N/A | ISS |
GO:0009723 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to ethylene stimulus | SoyBase | N/A | ISS |
GO:0010120 | GO-bp | Annotation by Michelle Graham. GO Biological Process: camalexin biosynthetic process | SoyBase | N/A | ISS |
GO:0010150 | GO-bp | Annotation by Michelle Graham. GO Biological Process: leaf senescence | SoyBase | N/A | ISS |
GO:0034976 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to endoplasmic reticulum stress | SoyBase | N/A | ISS |
GO:0042538 | GO-bp | Annotation by Michelle Graham. GO Biological Process: hyperosmotic salinity response | SoyBase | N/A | ISS |
GO:1900056 | GO-bp | Annotation by Michelle Graham. GO Biological Process: negative regulation of leaf senescence | SoyBase | N/A | ISS |
GO:0005634 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: nucleus | SoyBase | N/A | ISS |
GO:0003677 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: DNA binding | SoyBase | N/A | ISS |
GO:0003700 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: sequence-specific DNA binding transcription factor activity | SoyBase | N/A | ISS |
PF02365 | PFAM | No apical meristem (NAM) protein | JGI | ISS | |
UniRef100_G7IH02 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: NAC domain protein n=1 Tax=Medicago truncatula RepID=G7IH02_MEDTR | SoyBase | E_val: 4.00E-30 | ISS |
UniRef100_I1KU15 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1KU15_SOYBN | SoyBase | E_val: 7.00E-43 | ISS |
Glyma08g18044 not represented in the dataset |
Glyma08g18044 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma.08g169400 | Wm82.a2.v1 | IGC | As supplied by JGI |
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma08g18044.1 sequence type=CDS gene model=Glyma08g18044 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGGTGTGAACGAAGATTTCAACAAGGATATTGATGATCATCATCATGAGTATGTGGATGATGATGATGTTCCTCTTCCGGGGTTTCGTTTCCACCCTACAGATGAAGAACTTGTTAGTTTCTATCTTCGAAGGAAGCTTCACAAGAAACCCATCAGCATCGAGCTCATCAAACAGATTGATATTTACAAATACGATCCTTGGGATCTTCCAAGTATGTTTGTTGTTTGCACTCTAAATTAA
>Glyma08g18044.1 sequence type=predicted peptide gene model=Glyma08g18044 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MGVNEDFNKDIDDHHHEYVDDDDVPLPGFRFHPTDEELVSFYLRRKLHKKPISIELIKQIDIYKYDPWDLPSMFVVCTLN*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||