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Report for Sequence Feature Glyma08g15715

Feature Type:gene_model
Chromosome:Gm08
Start:11401079
stop:11434658
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma08g15715
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G16340AT Annotation by Michelle Graham. TAIR10: guanyl-nucleotide exchange factors;GTPase binding;GTP binding | chr4:9228773-9241060 REVERSE LENGTH=1830 SoyBaseE_val: 0ISS
GO:0000226GO-bp Annotation by Michelle Graham. GO Biological Process: microtubule cytoskeleton organization SoyBaseN/AISS
GO:0000911GO-bp Annotation by Michelle Graham. GO Biological Process: cytokinesis by cell plate formation SoyBaseN/AISS
GO:0006084GO-bp Annotation by Michelle Graham. GO Biological Process: acetyl-CoA metabolic process SoyBaseN/AISS
GO:0007020GO-bp Annotation by Michelle Graham. GO Biological Process: microtubule nucleation SoyBaseN/AISS
GO:0009855GO-bp Annotation by Michelle Graham. GO Biological Process: determination of bilateral symmetry SoyBaseN/AISS
GO:0010014GO-bp Annotation by Michelle Graham. GO Biological Process: meristem initiation SoyBaseN/AISS
GO:0010073GO-bp Annotation by Michelle Graham. GO Biological Process: meristem maintenance SoyBaseN/AISS
GO:0010075GO-bp Annotation by Michelle Graham. GO Biological Process: regulation of meristem growth SoyBaseN/AISS
GO:0010090GO-bp Annotation by Michelle Graham. GO Biological Process: trichome morphogenesis SoyBaseN/AISS
GO:0016126GO-bp Annotation by Michelle Graham. GO Biological Process: sterol biosynthetic process SoyBaseN/AISS
GO:0016132GO-bp Annotation by Michelle Graham. GO Biological Process: brassinosteroid biosynthetic process SoyBaseN/AISS
GO:0016192GO-bp Annotation by Michelle Graham. GO Biological Process: vesicle-mediated transport SoyBaseN/AISS
GO:0045010GO-bp Annotation by Michelle Graham. GO Biological Process: actin nucleation SoyBaseN/AISS
GO:0051322GO-bp Annotation by Michelle Graham. GO Biological Process: anaphase SoyBaseN/AISS
GO:0005634GO-cc Annotation by Michelle Graham. GO Cellular Compartment: nucleus SoyBaseN/AISS
GO:0005829GO-cc Annotation by Michelle Graham. GO Cellular Compartment: cytosol SoyBaseN/AISS
GO:0005886GO-cc Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane SoyBaseN/AISS
GO:0019898GO-cc Annotation by Michelle Graham. GO Cellular Compartment: extrinsic to membrane SoyBaseN/AISS
GO:0070971GO-cc Annotation by Michelle Graham. GO Cellular Compartment: endoplasmic reticulum exit site SoyBaseN/AISS
GO:0005085GO-mf Annotation by Michelle Graham. GO Molecular Function: guanyl-nucleotide exchange factor activity SoyBaseN/AISS
GO:0005525GO-mf Annotation by Michelle Graham. GO Molecular Function: GTP binding SoyBaseN/AISS
GO:0051020GO-mf Annotation by Michelle Graham. GO Molecular Function: GTPase binding SoyBaseN/AISS
KOG1997 KOG PH domain-containing protein JGI ISS
PTHR23317Panther DEDICATOR OF CYTOKINESIS (DOCK) JGI ISS
PTHR23317:SF8Panther SPIKE-1 JGI ISS
PF06920PFAM Dedicator of cytokinesis JGI ISS
UniRef100_B9RSI5UniRef Annotation by Michelle Graham. Most informative UniRef hit: Spike-1, putative n=1 Tax=Ricinus communis RepID=B9RSI5_RICCO SoyBaseE_val: 0ISS
UniRef100_UPI00023380ECUniRef Annotation by Michelle Graham. Best UniRef hit: UPI00023380EC related cluster n=1 Tax=unknown RepID=UPI00023380EC SoyBaseE_val: 0ISS

Expression Patterns of Glyma08g15715
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma08g15715 not represented in the dataset
Glyma08g15715 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma08g15715 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.08g148300 Wm82.a2.v1IGC As supplied by JGI

References for Glyma08g15715
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma08g15715
>Glyma08g15715.1   sequence type=CDS   gene model=Glyma08g15715   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGCTACACCTCCGCCAGCGCCGCGATGCCGCCGCGCCCGCCACCACGCGCTGGCGCAACACGTTCGAGGAGAATCTGGAGCAGTGGCCGCACCTCAACGAGCTCGTCCATTGCTACACCACGGATTGGGTCAAGGATGAGAACAAGTACGGACACTACGACTCCGTCGGAACCCCGTCGTTTCATAACCAAATATATGAAGGCCCCGACACTGACATTGAAACCGAAATGCGCCTTGCTGGGGCAAGGCAAACGAAGGGTGATGAAGTTAATGATGATGACATACCTAGTACTTCGGGAAGGCAGTTTACGGAAGGTGTAGATGGTGACTTGCTGCCTTCAGATGTTCCAAAGCATATTGGTCAATCTCCCCTTCCTGCTTATGAGCCTGCATTTGATTGGGAAAATGAGAGGACATTGATATTTGGACAAAGGATACCGGAAACTCCTCTATCGCATGGAATGAAGATCTCTGTAAAAGTTCAGTCTTTACAATTTCAAGCAGGATTGGCTGAGCCCTTTTATGGTACAATTTGTTTGTACAATAGGGAGAGAAGAGAAAAGTTATCAGAAGACTTTTACTTTCATGTCTTGCCAACTGAAACGCAGAATGCCAAAATTACATGTGAACCTCGTGCAGTCTTTTACTTAGATGCGCCATCTGCTTCAGTTTGTTTGTTAATCCAGTTAGAGAAGCATGCTACTGAAGAAGGCGGGGTTACTGCTTCTGTTTATTCACGTAAAGATCCAGTGCACTTGACTGAGAGAGAAAAGCAAAAACTGCAGGTGTGGTCTAAAATCATGCCTTACAAAGAGTCCTTTGCATGGACCATCGTATCATTATTTGATAGCAGTATTGGTGCAGCTTCAGTAGGGCCTGCTTCCCCTAGCAGCCCTCTTGCTCCTAGTATATCTGGTTCAAGTTCTCATGAAGGTGTTTTTGAGACTAGTGCAAAAATCTCTTTAGATGGAAAGCTGAGTTACTCTAATGGAAATTCAGTGGTAGTAGAGGTTTCAAACTTAAATAAAGTCAAAGAAAGCTATACTGAGGAATCACTTCAGGATCCTAAACGTAAGGTGCACAAACCTGTCAAAGGTGTTTTGAGGCTGGAAATTGAAAAGCACCAGATTTCCCAGGCTGATTTGGAAAACATGTCAGAAAGTGGTAGTATAACCAATGATTCTGTTGACCAAGGGGATCGAATTGCGGATTCACTGTCTGGAAAGTACCCTAGTAATGGTTGTGATGATCCTCAGGGTAGCAACCTCAGGGTAGTATCTCCAGTTTTGGGAAATGGAGCAAATCAACATGGAAATTCAGATTTTAATGCCCATGATTTCCATGCTTTTGACTTCCGCACTACAACAAGAAACGAGCCTTTTTTGCAACTTTTTCACTGCCTGTATGTGTATCCGTTGACTGTAAGTTTGGGTAGGAAAAGGAATTTGTTTTTACGGGCTGAACTCAGGGAGGATGATGGTGATATTCGTAGGCAGCCATTGGAGGCAATATATCCTAGAGATCCAGGTCTCGATGCATCATTTCAAAAGTGGGGTCACACCCAAGTTGCTGTCGGAGCTAGGGTTGCTTGTTACCATGATGAAATCAAACTTTCCCTTCCTGCTATGTGGACACCAACGCACCACCTTCTATTTACTCTATTTCATGTTGATCTGCAAACAAAATTGGAAGCTCCAAAGCCAGTGGTAATTGGATATGCAGCACTTCCTTTATCTTCCCATGCTCAGCTGCGGTCAGAAATAAATCTTCCAATTATGAGAGAATTGGTTCCTCATTATCTCCAGGATGCAGGACGGGAGAGATTGGATTATTTGGAAGATGGGAAAAGTGTCTTCAGATTGCGTTTGCGACTGTGTTCGTCTTTATACCCTATCAATGAACGTATTAGAGATTTCTTTCTTGAATATGACCGGCATACTCTTCGAACAAGTCCACCATGGGGTTCTGAACTTCTGGAGGCTATTAATAGTTTGAAGAATGTTGATTCCACTGCTTTACTTCAGTTTCTTCACCCAATTCTTAACATGCTACTTCATCTTATTGGCAATGGTGGAGAAACACTTCAGGTTGCTGCGTTTCGGGCCATGGTTAATATTGTAACCAGGGTGCAGCAGGAATCAGTTGATGATGCTGAAAGGAATCATTTCCTAGTCAACTATGTTGATTGTGCCTTTGATGATTTTGGTGGTCGTCAACCGCCTGTATATCCTGGACTGTCCACTGTTTGGGGAAGCTTGGCACGAAGTAAGGCCAAAGGGTATCGTGTTGGACCTGTGTACGATGATGTTTTGGCTATGGCATGGTTTTTCCTGGAGCTAATTGTTAAATCAATGGCATTGGAGAAGACTCGTCTCTTTTATCACAGCCTTCCAATAGGTGAAGATATCCCTCCAATGCAGTTGAAGGATGGGGTATTCAGATGTATATTGCAGTTGTATGATTGCCTTCTTACTGAGGTGCATGAGCGCTGTAAGAAGGGTTTAAGCCTGGCAAAACGCTTGAACAGTAGTTTGGCCTTCTTTTGTTATGATCTTCTATCCATTATTGAGCCACGGCAAATTTTTGAGTTGGTATCATTATATCTTGACAAGTTCTCTGGTGTATGTCAATCAGTACTTCATGAATGCAAACTTACCTTTTTACAAATAATATGTGATCACGATCTTTTTGTGGAAATGCCTGGAAGGGACCCTTCTGATAGGAACTACCTTTCTTCTGTATTAATACAAGAACTCTTTGTTACTTTGGATCATGAAGATTTGTCTCTAAGAGAAAAGGCAGCAAGAATCTTGGTAGTGCTCTTGTGCAAACATGAGTTTGATGTCAGATACCAGAAACCTGAAGATAAATTGTATATTGCTCAGCTATATTTCCCACTTGTTGGACAGATATTAGATGAAATGCCTGTTTTCTACAACCTCAATTCTGTTGAAAAGCGGGAAGTTTCAATTGTAATTTTGCAAATAGTTCGAAACCTTGATGATGCATCACTTGTCAAGGCATGGCAGCAAAGCATTGCTCGGACTAGATTGTTTTTCAAGCTCATGGAGGAATGCTTGCTTTTATTTGAGCACAAAAAACATGCTGATGGCATGTTACTTGGCTCCAGCTCTCGCAACCCAGTAGGGGAGGCACCTGCTTCCCCAAAGTACTCTGACAGACTTTCTCCTGCAATCAACAATTATCTGTCTGAGGCCTCAAGGCAGGAAGTCAGGCCTCAGGGAACACCAGATAATGGTTATTTATGGCAGAGAGTAAATTCCCAGTTAAGCTCCCCTAGCCAGCCATATTCCTTGAGAGAGGCTCTAGCTCAAGCACAGTCTTCCAGGATTGGAGCTTCTGCTCAAGCACTTCGAGAATCTTTACATCCACTTTTGAGGCAGAAATTGGAACTTTGGGAGGAAAATTTGAGTGCCTTTGTCAGTCTTCAGGTTTTGGAGGTGACTGAGAAATTCTCCATGATGGCAGCATCCCATAGCATTGCCACCGATTATGGAAAACTTGATTGCATAACTTCTGTGTTCATGAGCTTTTTATCCAGAAATCAGCCGTTGACTTTTTGGAAAGCATTTTTTCCTGTATTTAACAGTGTGTTTGATTTACATGGGGCAACTTTGATGGCAAGGGAAAATGATCGTTTTCTAAAGCAAGTCACTTTTCATCTCCTTCGGCTTGCAGTCTTCCGAAATGAAAACATCAGGCAAAGGGCAGTTGTTGGTCTTCAAATACTTGTGAGGAGTTCATTTCATTACTTTATGCAGACAGCTAGATTGAGAGTCATGTTGATTATCACATTATCAGAGCTAATGTCTGATGTGCAAGTGACTCAGATGAGATCTGATGGAAGCTTAGAAGAAAGTGGTGAAGCACGGAGACTTAGGAAGTCTTTAGATGAAATGAAGGATGAAACTAAAAATGCTTACTTGTTGAAGGAGTGTGGATTACCTGAGAATGCTCTTGTGATCGTACCCGAAAAAATGACAGAGAATAGATGGTCCTGGTCTGAGGTGAAATATCTCTCTGACAGCCTTCTTTTGGCCCTTGATGGCAGCTTGGAGCATGCACTATTGGCCCCCATGATGACTATGGATAGATATGCTGCTGCTGAAAGCTTTTATAAACTGGCCATGGCATTTGCCCCAGTCCCTGATCTTCACATAATGTGGTTGCTTCATCTTTGTGATGCACATCAGGAAATGCAGTCATGGGCAGAAGCTGCTCAGTGTGCTGTTGCTGTTGCTGGTGTTGTAATGCAGGCCCTTGTTGCCAGAAATGATGGTGTTTGGAGCAAAGACCATGTTGCTGCTTTACGTAAGATTTGTCCTATGGTTAGCAATGAGATTACGTCTGAAGCATCTGCTGCGGAGGTTGAGGGATATGGTGCTTCAAAACTGACTGTTGACTCTGCTGTGAAATACTTGCAGCTTGCTAATAAGCTCTTCTCACAAGCTGAGCTTTTTCATTTCTGTGCAAGCATTCTGGAACTTGTAATCCCAGTTTACAAAAGCAGGAGGGCTTATGGACAGTTGGCTAAATGTCACACATTACTTACCAGTATCTATGAATCAATTCTTGAACAGGAATCTAGTCCAATTCCTTTCACAGATGCAACTTACTACAGGGTTGGATTTTATGGTGATAGATTTGGGAAACTTGATAAAAAGGAGTATGTATATCGTGAGCCTCGTGATGTACGTCTAGGTGACATAATGGAAAAACTTAGTCACACATATGAGTCTAGAATGGATGACAATCACACTTTGCATATTATTCCAGATTCTAGACAAGTGAAGGCAGAGGAGTTGCAGCTTGGTGTCTGTTACCTTCAGATTACTGCCGTTGATCCAGTAATGGAAGATGAGGATTTAGGAAGTAGGAGAGAAAGAATTTTCTCTCTCTCTACTGGAAGCGTTCGAGCCCGCGTATTTGATCGATTCTTGTTTGACACCCCATTTACCAAAAATGGCAAGACTCAAGGTGGATTGGAAGATCAATGGAAGAGACGCACTGTTCTTCAGACTGAGGGTTCTTTTCCAGCGTTAGTAAATAGGTTATTGGTAATCAAATCCGAGTCCCTTGAGTTCTCTCCTGTAGAAAATGCAATCGGAATGATTGAAACACGAACTGCTGCCTTAAGAAATGAGCTTGAAGAGCCTCGAAGTTCAGAGGGGGATCAACTTCCAAGACTCCAGAGTCTGCAAAGAATCCTACAAGGCAGTGTTGCAGTACAAGTGAATAGTGGAGTCTTGAGTGTCTGCACAGCCTTCTTGTCCGGGGAGCCTGCGACGAGGTTACGATCACAGGAACTGCAACAACTTATAGCTGCCCTTCTTGAGTTCATGGCTGTTTGTAAACGTGCCATCCGCGTACATTTCAGATTGATTGGTGAGGAAGATCAGGATTTCCATACCCAGCTTGTAAATGGTTTCCAGTCATTGACAGCAGAGTTATCACATTACATTCCTGCCATTCTCTCGGAGCTATGA
Predicted protein sequences of Glyma08g15715
>Glyma08g15715.1   sequence type=predicted peptide   gene model=Glyma08g15715   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MLHLRQRRDAAAPATTRWRNTFEENLEQWPHLNELVHCYTTDWVKDENKYGHYDSVGTPSFHNQIYEGPDTDIETEMRLAGARQTKGDEVNDDDIPSTSGRQFTEGVDGDLLPSDVPKHIGQSPLPAYEPAFDWENERTLIFGQRIPETPLSHGMKISVKVQSLQFQAGLAEPFYGTICLYNRERREKLSEDFYFHVLPTETQNAKITCEPRAVFYLDAPSASVCLLIQLEKHATEEGGVTASVYSRKDPVHLTEREKQKLQVWSKIMPYKESFAWTIVSLFDSSIGAASVGPASPSSPLAPSISGSSSHEGVFETSAKISLDGKLSYSNGNSVVVEVSNLNKVKESYTEESLQDPKRKVHKPVKGVLRLEIEKHQISQADLENMSESGSITNDSVDQGDRIADSLSGKYPSNGCDDPQGSNLRVVSPVLGNGANQHGNSDFNAHDFHAFDFRTTTRNEPFLQLFHCLYVYPLTVSLGRKRNLFLRAELREDDGDIRRQPLEAIYPRDPGLDASFQKWGHTQVAVGARVACYHDEIKLSLPAMWTPTHHLLFTLFHVDLQTKLEAPKPVVIGYAALPLSSHAQLRSEINLPIMRELVPHYLQDAGRERLDYLEDGKSVFRLRLRLCSSLYPINERIRDFFLEYDRHTLRTSPPWGSELLEAINSLKNVDSTALLQFLHPILNMLLHLIGNGGETLQVAAFRAMVNIVTRVQQESVDDAERNHFLVNYVDCAFDDFGGRQPPVYPGLSTVWGSLARSKAKGYRVGPVYDDVLAMAWFFLELIVKSMALEKTRLFYHSLPIGEDIPPMQLKDGVFRCILQLYDCLLTEVHERCKKGLSLAKRLNSSLAFFCYDLLSIIEPRQIFELVSLYLDKFSGVCQSVLHECKLTFLQIICDHDLFVEMPGRDPSDRNYLSSVLIQELFVTLDHEDLSLREKAARILVVLLCKHEFDVRYQKPEDKLYIAQLYFPLVGQILDEMPVFYNLNSVEKREVSIVILQIVRNLDDASLVKAWQQSIARTRLFFKLMEECLLLFEHKKHADGMLLGSSSRNPVGEAPASPKYSDRLSPAINNYLSEASRQEVRPQGTPDNGYLWQRVNSQLSSPSQPYSLREALAQAQSSRIGASAQALRESLHPLLRQKLELWEENLSAFVSLQVLEVTEKFSMMAASHSIATDYGKLDCITSVFMSFLSRNQPLTFWKAFFPVFNSVFDLHGATLMARENDRFLKQVTFHLLRLAVFRNENIRQRAVVGLQILVRSSFHYFMQTARLRVMLIITLSELMSDVQVTQMRSDGSLEESGEARRLRKSLDEMKDETKNAYLLKECGLPENALVIVPEKMTENRWSWSEVKYLSDSLLLALDGSLEHALLAPMMTMDRYAAAESFYKLAMAFAPVPDLHIMWLLHLCDAHQEMQSWAEAAQCAVAVAGVVMQALVARNDGVWSKDHVAALRKICPMVSNEITSEASAAEVEGYGASKLTVDSAVKYLQLANKLFSQAELFHFCASILELVIPVYKSRRAYGQLAKCHTLLTSIYESILEQESSPIPFTDATYYRVGFYGDRFGKLDKKEYVYREPRDVRLGDIMEKLSHTYESRMDDNHTLHIIPDSRQVKAEELQLGVCYLQITAVDPVMEDEDLGSRRERIFSLSTGSVRARVFDRFLFDTPFTKNGKTQGGLEDQWKRRTVLQTEGSFPALVNRLLVIKSESLEFSPVENAIGMIETRTAALRNELEEPRSSEGDQLPRLQSLQRILQGSVAVQVNSGVLSVCTAFLSGEPATRLRSQELQQLIAALLEFMAVCKRAIRVHFRLIGEEDQDFHTQLVNGFQSLTAELSHYIPAILSEL*






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