Report for Sequence Feature Glyma08g15591
Feature Type: gene_model
Chromosome: Gm08
Start: 11327980
stop: 11331811
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma08g15591
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
PF03195 PFAM
Protein of unknown function DUF260
JGI ISS
UniRef100_G7K3J3 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: LOB domain-containing protein n=1 Tax=Medicago truncatula RepID=G7K3J3_MEDTR
SoyBase E_val: 1.00E-19 ISS
UniRef100_I1KTG0 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1KTG0_SOYBN
SoyBase E_val: 5.00E-54 ISS
Expression Patterns of Glyma08g15591
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma08g15591
Paralog Evidence Comments
Glyma05g32320 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma08g15591 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.08g147300 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma08g15591
Transcripts of Glyma08g15591
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma08g15591.2 sequence type=transcript gene model=Glyma08g15591 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
CTTGATTCATGGCCCTTTCTCATTTTAGACTCTTAATTTTAATATTTTTCTTTTGCATTGCAATATTGAAAAAGTAGCCGTTAAGATTTTTTCTATGGGTATAAACCTACTACAATACAAATATTCTTGGCAACTAAAACATCAAATCTTATATAAGATACCCTCCTCTCTATCACAGGAGCACAATATAAAGAGAAGAAATCTTTCTTGGATGCCAAATATTTTCTTATGATTTCTTTTCTTTTTTTTAAAAAAAAAATTGATATCATGATGTCTGGTAGCAAATTCCACCATACTTACGTGAACAACCTGCAAATACTTTATTTTGAAGCACATTGTAGGATTCAAGGCCCTATTTATGGATGTGCTGGGATTATCTTTAAATTATATGAACAAATCAACAGTGCCGAAATTGCACTTGCGTATATCGATATCCAAACTCAAACTGCTTGTCACAAGCTTCAAGCTGAATCAAACTTTGATGTCTTGCCAGCACAAAGTAGCATCACAGCAAAGTTTCAATGGAAAAGTGAATTGGAGTGATGGTTGTGTGGCCTTATAATGAGATCATGATGAGATAACAGAATCTATGTGCAATTATTATCTCGTATTATTATCTTGTGATCATGTAAATCAATTTGTTTAGTCTAGACATGATCTTAAGAGTTTTATTTGAAGAATCAATCTGTATAATTCAATCTTAGAAGATTTTGTTGTAACTCTCTTGTGTATATTTATGCCTTAGCAAAGCATGAAATACAAAACAAAATTATTCTGTCATAAAATCCTTTATGGCATCAGAGTCAACAGGTTTTGTTTGAAATTTAGTGGCAATGAGTCATTGTGAAGAGGAGACTCCTAAGAATGAGTCTCATAAGCAAGAAGAACATAAGATGGTGAAGAAGACTTCATCACTGCATGAATTGAATTCCAATGACAACCCGAGAAATTTGATTACTCAAGTGCGTGCAATAAGGAGACAGTTCAGGCTTGACTGGGCTTACTACAAAGCAGTGGCAGACGCTGATAGAATTACTAAATGCTTAGAAAACAAACTATAATAACAAGATGACATGTGAGCGTGATACCAATACATGGATAATTGACATAGGGGCTTCCAACCACATGACTGGAAACCTAAATCATATGCATGAACTGCAAAACATTCAAAGTTGTCCAGTTGGACTTCCTAATGGATAACATACGACA
Coding sequences of Glyma08g15591
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma08g15591.1 sequence type=CDS gene model=Glyma08g15591 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGATTTCTTTTCTTTTTTTTAAAAAAAAAATTGATATCATGATGTCTGGTAGCAAATTCCACCATACTTACGTGAACAACCTGCAAATACTTTATTTTGAAGCACATTGTAGGATTCAAGGCCCTATTTATGGATGTGCTGGGATTATCTTTAAATTATATGAACAAATCAACAGTGCCGAAATTGCACTTGCGTATATCGATATCCAAACTCAAACTGCTTGTCACAAGCTTCAAGCTGAATCAAACTTTGATGTCTTGCCAGCACAAAGTAGCATCACAGCAAAGTTTCAATGGAAAAGACCGTATTTCAAGGACGCTGATTGGAGCAGGTGA
>Glyma08g15591.2 sequence type=CDS gene model=Glyma08g15591 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGATTTCTTTTCTTTTTTTTAAAAAAAAAATTGATATCATGATGTCTGGTAGCAAATTCCACCATACTTACGTGAACAACCTGCAAATACTTTATTTTGAAGCACATTGTAGGATTCAAGGCCCTATTTATGGATGTGCTGGGATTATCTTTAAATTATATGAACAAATCAACAGTGCCGAAATTGCACTTGCGTATATCGATATCCAAACTCAAACTGCTTGTCACAAGCTTCAAGCTGAATCAAACTTTGATGTCTTGCCAGCACAAAGTAGCATCACAGCAAAGTTTCAATGGAAAAGTGAATTGGAGTGA
Predicted protein sequences of Glyma08g15591
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma08g15591.1 sequence type=predicted peptide gene model=Glyma08g15591 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MISFLFFKKKIDIMMSGSKFHHTYVNNLQILYFEAHCRIQGPIYGCAGIIFKLYEQINSAEIALAYIDIQTQTACHKLQAESNFDVLPAQSSITAKFQWKRPYFKDADWSR*
>Glyma08g15591.2 sequence type=predicted peptide gene model=Glyma08g15591 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MISFLFFKKKIDIMMSGSKFHHTYVNNLQILYFEAHCRIQGPIYGCAGIIFKLYEQINSAEIALAYIDIQTQTACHKLQAESNFDVLPAQSSITAKFQWKSELE*