Glyma08g14760 - SoyBase

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Report for Sequence Feature Glyma08g14760

Feature Type:	gene_model
Chromosome:	Gm08
Start:	10742312
stop:	10753714
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma08g14760

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT2G22125	AT	Annotation by Michelle Graham. TAIR10: binding \| chr2:9406793-9414223 FORWARD LENGTH=2150	SoyBase	E_val: 0	ISS
GO:0009832	GO-bp	Annotation by Michelle Graham. GO Biological Process: plant-type cell wall biogenesis	SoyBase	N/A	ISS
GO:0016049	GO-bp	Annotation by Michelle Graham. GO Biological Process: cell growth	SoyBase	N/A	ISS
GO:0030243	GO-bp	Annotation by Michelle Graham. GO Biological Process: cellulose metabolic process	SoyBase	N/A	ISS
GO:0030244	GO-bp	Annotation by Michelle Graham. GO Biological Process: cellulose biosynthetic process	SoyBase	N/A	ISS
GO:0051211	GO-bp	Annotation by Michelle Graham. GO Biological Process: anisotropic cell growth	SoyBase	N/A	ISS
GO:0005634	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: nucleus	SoyBase	N/A	ISS
GO:0005737	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm	SoyBase	N/A	ISS
GO:0005886	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane	SoyBase	N/A	ISS
GO:0009506	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: plasmodesma	SoyBase	N/A	ISS
KOG0166	KOG	Karyopherin (importin) alpha	JGI		ISS
PTHR23315	Panther	BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING	JGI		ISS
PTHR23315:SF42	Panther	BINDING	JGI		ISS
PF00168	PFAM	C2 domain	JGI		ISS
PF00514	PFAM	Armadillo/beta-catenin-like repeat	JGI		ISS
UniRef100_G7LAF3	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: U-box domain-containing protein n=1 Tax=Medicago truncatula RepID=G7LAF3_MEDTR	SoyBase	E_val: 0	ISS
UniRef100_I1KT65	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=2 Tax=Glycine max RepID=I1KT65_SOYBN	SoyBase	E_val: 0	ISS

Expression Patterns of Glyma08g14760

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma08g14760 not represented in the dataset	Glyma08g14760 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Paralogs of Glyma08g14760

Paralog	Evidence	Comments
Glyma05g31530	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.

Gene model name correspondences to Glyma08g14760 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.08g139300	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma08g14760

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma08g14760

Limit To All Plant Sequences

>Glyma08g14760.1   sequence type=CDS   gene model=Glyma08g14760   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGCTACCTCACTCGCTTGGAGACTTGCTGCCAACAATGGCACCACCCTTGCCGCAAATGATCTGGAAAGAAATGGTGACGGGAGGACTCAAGATTCAGAGCCCCCAACTCCACATTCTGTTCTGAAGATGGGATTGAGAGAGCGTAACAGCAGCATGGAGGATCCAGATGGGACATTAGCTAGTGTTGCCCAATGCATTGAGCAGCTGCGTCAGAGCTCATCTTCTGTGCAGGAGAAAGAGTATTCCTTAAGGCAGTTGTTGGAGCTTATAGATCTGCGTGAAAATGCTTTTAGTGCTGTTGGATCTCACTCTCAGGCAGTTCCAGTACTTGTTTCCCTTCTCCGGTCCGGTTCATTGAATGTGAAGATACAGGCAGCAACTGTCTTGGGCTCCCTTTGTAAAGAAAATGAGCTAAGGGTGAAGGTCTTGCTTGGAGGATGCATTCCTCCATTGCTTGGTCTACTAAAGTCCAGTTCTACTGAAGGCCAAATTGCTGCTGCAAAGACTATTTATGCTGTCTCTCAAGGTGGTGTAAAAGATCATGTTGGTTCAAAAATTTTTTCAACTGAAGGAGTTGTACCAGTGCTCTGGGAGCAGCTGAAAACTGGCCTGAAGGCAGGAAATGTAGTTGAAGGTTTATTGACTGGTGCATTGAAAAATCTCTCCAGCAATACTGAGGGATTCTGGAATGCAACAATACGAGCTGGAGCAGTGGACATATTAGTGAAGTTACTGGCAACGGGACAGCCTAGCAGTTTAGCTAATGTGTGCAATTTACTTGCTTCTGTAATGGTGGAGGATGCATCTGTTTGTTCAAAGGTGTTGACAGCGGAGGTGACAAAACAACTTCTGAAACTATTAGGCCCAGGTAATGATGACTCTGTTAGAGCTGAAGCAGCTGGTGCTCTGAATTCTCTTTCTGCCCAGTGCAAAGAGGCACGGCGAGAGATAGCCAATGCTAATGGTATTCCTGCTTTGATTAATGCTACCATAGCTCCTTCCAAAGAATACATGCAGGGTGAGTGTGCTCAAGCATTACAGGAGAATGCTATGTGTGCTCTAGCAAACATCTCTGGGGGTTTGTCTTTTGTCATATCTAGCCTTGGCCAAAGTCTTGAATCATGCACCTCACCTACCCAAATTGCTGACACATTAGGAGCTTTGGCATCAGCTCTCATGATATATGATAACAAGGCAGAATCTTCCAGAGCATCAGATCCTTTGGTTGTCGAGCAGACATTACTCAAGCAATTTAAACCTCGCTTGCCCTTCCTTGTACAGGAACGAACCATTGAAGCACTTGCTAGTTTGTATGGAAATTCCATACTTTCAAATAAACTCGCAAATTCTGATGCAAAACACCTGCTTGTTGGTTTGATAACAATGGCAGCTAATGAAGTTCAAGACGAGCTTATAAAAGCTCTGTTGACACTGTGCAAAAGTGAAGGCAGTCTATGGCGTGCACTTCAGGGCCGTGAAGGGGTTCAGCTATTGATATCCCTTTTGGGGCTTTCATCAGAACAGCAGCAAGAGTGTGCAGTTGCCCTGCTTTGCCTTCTATCATATGAAAATGATGAAAGTAAATGGGCAATTACTGCTGCTGGTGGCATACCTCCACTTGTTCAAATTTTGGAGACAGGATCTGCAAAAGCAAAGGAAGATTCAGCAACAATCCTTAAGAACCTGTGCAATCATAGCGAAGATATACGTGCTTGCGTTGAAAGTGCTGATGCTGTTCCTGCATTGTTGTGGCTATTGAAGAATGGAAGTCCAAATGGGAAGGATATTGCAGCAAAGACTTTAAATCATTTAATACATAAATCTGACACTACAACCATTAGTCAGCTTACAGCTTTATTGACTAGTGATCTTCCTGATTCTAAGGTTTATGTCTTGGATGCTTTGAGAAGTATGCTTTCTGTTGCTCCCCTTAGTGAAATTTTACGTGAAGGTAGTGCTTCCAGTGATGCATTTGATACCATGATAATATTATTGAGCTCTACCAAAGAAGAAACTCAGGAAAAGTCTGCATCAGCTCTGGCAGGAATTTTTGAAACAAGGAAAGATGTGCGTGAAAGTAGCATTGCTGTTAAAACTCTTTTGTCAGCCATGAAATTGCTTAATGCTGAATCTGAAAGTATCCTGATTGAGTCCTCACACTGCCTGGCTGCAATATTTCTTTCCATCAAAGAGAACAGGGATGTAGCTGCTGTTGCTAGAGACACATTATCCACCCTAGTTGCACTAGCAAACTCTTCAGTTTTGGAAGTTGCAGAGATGGCCACGTGTGCTCTGGCAAACCTCATTTTGGATAGTGAAATTGCAGAGAAAGCTATTGCAGAAGAAGTTATCTTACCTGCTACTAGAATATTATGTGAAGGCACAATTTCTGGAAAAACCCATGCTGCAGCAGCAATTGCTCGTCTCCTGCATTCTCGGGATGTTGATTATGCTGTAACTGATTGTGTGAATCGTGCTGGAACTGTTCTTGCATTAGTTTCTTTCTTAGATTCTGCTGTTAATGGATCTGTTGCCACATCAGAGGCTCTAGAAGCACTTGCCATCCTGTCCAGGTCAGAAGAGACCAGTGCAAATATTAAATCTGCTTGTGCAGTTTTGGCTGAATTCCCTAAAAGCATAAGCCCAATAGTCTTGTGTATTGTTGATTCAGAGCCAACATTGCAAGATAAAACAATTGAGATTTTATCTCGATTGTGTAAGGATCAGCCTGTTGTTTTAGGCGATACTATCGTGTCAGCACCTGGATGTATATCTTCAATAGCTAAGAGGATAATTAGTTCCACAGATGTCAAGGCCAAAATTGGGGGAGCAGCACTTCTTATTTGTACTGCGAAAGCCAATCATCAGAGACTGGTGGAGGATCTCCATTCGTCAAACTTGTGTGCCGATCTTATTCGGTCTCTTGTTGATATGCTTACTTCTGCACAGCCTTCTTTGGGTTACCTGGATGATGACAACAAGGAATTCATTAGCATATGCAGGTACACAAGAGAAGAGGCCAATGGTTGTGAATCCAACACTAGCACTAGCATTATATGTGGTGCTGACTTGGCGATATGGTTACTGTCTATTCTGGCTTGTCATGATGAAAAAAATAAAATTGCAATAATGGAGGCTGGAGCAATCGATGTTCTCATTGACAGGATCTCAAATTGTTTCTCACAATATTCTCAGATTGAATACAAAGAAGATAGCAGCATGTGGATTCATGCTTTGTTGTTGGCAATATTATTTCAAAATAGAGATATCATACGGGCACATCCCACCATTAAATCTGTACCAGCACTTACCAGTTTATTGAAGTCAGAGGAATCAGCAAACAAATATTTTGCTGCACAATCAATAGCTAGCCTTGTCTGTAATGGTAGCAGGGGAACACTTTTGTCTGTGGCAAATTCTGGGGCAGCAGGTGGACTTATCTCTTTGCTTGGCTGTGCTGATACTGATATACAGGATCTTCTGGAATTGTCAGAGGAATTTTCTTTGGTGCGTTATCCTGATCAAGTGGCTCTTGAGAGGTTGTTTAGAGTTGATGATATAAGAGTGGGAGCCACTTCTCGGAAGGCAATACCTGCTCTAGTTGATCTGCTCAAACCAATTCCAGATCGTCCAGGAGCACCATTTTTGGCACTTGGGCTTTTGACTCAGCTTGGTAAAGATTGTCCTTCAAATATGAGTGTAATGGTGGAGTCTGGGGCCTTAGAGGCACTTACGAAGTATCTTTCACTGAGTCCACAAGATGCAACTGAAGAAGCTGCTACAGATCTGCTAGGAATCCTGTTTAGCAGTGCTGAAATACGAAAACATGAATCAGCATATGGTGCTGTTGCTCAACTTGTAGCTGTTCTACGTTTAGGAGGAAGAGGAGCAAGGTATAGTGCTGCAAAAGCCTTGGAAAGTTTGTTTTCTGCTGACCACATTAGAAATGCAGAGATTGCTCGGCAAGCTGTTCAACCATTGGTGGAGATTCTCAGTACCGGTTCAGAAAAGGAGCAGCATGCTGCTATTGCTGCATTGGTTGGGTTACTGAGTGAAAACCCATCAAGAGCACTTGCTGTTGCTGATGTTGAGATGAATGCAGTGGAAGTTCTTTGTAGGATCATTTCATCAAATTGTTCAATAGACTTGAAAGGGGATGCTGCTGAATTATGCTGTGCTCTTTTTGGAAATACGAGGATTCGGTCCACAGCAGCTGCTGCATGCTGTGTCGAACCACTTGTCTCTCTCCTTGTGACTCAGTTCAGTCCCGCTCAGCTTTCAGTTGTCCGGGCATTGGATAGGCTTGTTGATGATGAGCAACTGGCTGAATTAGTTGCTGCACATGGTGCAGTTGTTCCTCTTGTTGGTCTACTGTCTGGTAGGAACTATATACTTCATGAGGCTATTTCCAGAGCTCTGGTCAAGTTAGGAAAAGACAGGCCTGCTTGTAAAGTGGAAATGGTGAAAGTTGGAGTTATTGAAAGCGTACTTGACATCTTACATGAAGGACCTGATTATCTATGTGCAGCTTTTGCTGAACTGTTGCGTATATTGACCAATAATGCTAGCATAGCTAAAGGACCATCTGCTGCTAAAGTGGTTGAACCCTTGTTTTTGTTGTTGACAAGACAGGAATTTGGGCCTGATGGACAGCACAGTGCATTGCAGGTTTTGGTTAATATCTTAGAACATCCACAGTGTCGTGCTGACCATTCATTGACTTCTCGCCAAGTTATTGAACCACTTATCCATTTGCTTGACTCTCCAATTTCAGCAGTGCAACAGTTGGCTGCTGAGCTTCTTTCACATCTACTTGTAGAAGAACGCCTTCAGAAGGATCCAGTGACACAGCAAGCCATTGGCCCTCTCGTTCGAGTTCTTGGTTCTGGTATACACATATTGCAGCAAAGAGCTGTAAAAGCCCTAGTTAGTATTGCACTAACATGGCCTAATGAAATTGCTAAAGAGGGTGGTGTTATTGAAATTTCCAAAGTGATATTGCAAGCTGACCCTTCCCTTCCTCATGCTTTATGGGAATCTGCTGCCTCGGTTTTGTCAAGTATTCTGCAGTTTAGCTCTGAATTCTACTTGGAAGTTCCTATTGCTGTATTGGTAAGGTTGCTTCGATCAGGCTCAGATAGCACAGTTGTTGGTGCTTTAAATGCTCTTTTGGTGTTGGAAAATGATGACGGAACTAGTGCAGAAGCTATGGCTGAAAGTGGTGCTATAGAGGCTCTCTTGGAGCTCCTACGATCTCATCAGTGTGAGGAAATTGCTGCAAGACTTTTAGAAGTATTGCTGAACAATGTGAAGATTCGAGAAACGAAAGTAACAAAGTCAGCTATCGTACCATTATCACAGTATCTTTTGGACCCACAAACTCAAGCACAGCAGGCAAGGTTGTTGGCAACTTTGGCTCTTGGGGATCTGTTTCAGAATGAGGCTCTTGCTCGAACAAGTGATGCAGTTTCAGCTTGTCGTGCTTTAGTGAATGTGCTTGAAGAGCAACCAACAGAAGAAATGAAAGTTGTAGCCATATGTGCTTTGCAGAATCTTGTGATGTACAGTCGATCAAATAGGAGAGCAGTTGCAGAGGCCGGTGGTGTTCAGGTTGTATTGGATCTGATAGGTTCAAGTGATCCAGAAACATCAATTCAGGCGGCAATGTTTGTTAAACTTCTCTTCTCAAATAATACTATTCAAGAGTACGCTTCTAGTGAAACAGTCAGAGCAATTACTGCCGCTATTGAGAAAGATTTATGGGCTTCTGGAACTGTGAATGACGAGTATCTGAAAGCCTTAAATTCTCTATTTACCAACTTCCCAAGACTTAGAGCAACTGAACCAGCAACCCTTAGCATTCCCCATCTGGTTACAGCCTTAAAGACAGGTTCAGAGGCTTGTCAGGAAGCTGCATTGGATGCACTTTTCCTGCTCAGACAAGCTTGGTCAGCATGCCCAGCTGAAGTTTCTAGAGCTCAGTCAATTGCAGCTGCAGATGCAATTCCATTGCTGCAGTACTTAATCCAGTCTGGGCCACCTCGGTTTCAGGAGAAAGCAGAATTTTTATTGCAGTGTTTGCCAGGGACATTGGTGGTGATCATCAAGCGTGGTAACAATATGAAGCAGTCTGTTGGAAACCCAAGTGTTTACTGCAAGCTTACACTTGGCAACACTCCACCAAGGCAAACCCAGGTGGTTTCAACTGGCCCTAATCCAGAGTGGGGTGAGAGCTTTTCATGGACCTTTGAAAGTCCTCCAAAAGGCCAGAAGCTTCATATTTCTTGCAAAAATAAGAGCAAAGTGGGAAAGAGTAAATTTGGGAAAGTTACAATCCAGATTGATCGAGTGGTAATGCTTGGATCAGTAGCTGGAGAGTATGCTTTGTTGCCTCAAAGTAAAAGTGGCCCCCCACGGAATCTAGAAATAGAATTTCAGTGGTCTAACAAGTGA

Predicted protein sequences of Glyma08g14760

Limit To All Plant Sequences

>Glyma08g14760.1   sequence type=predicted peptide   gene model=Glyma08g14760   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MATSLAWRLAANNGTTLAANDLERNGDGRTQDSEPPTPHSVLKMGLRERNSSMEDPDGTLASVAQCIEQLRQSSSSVQEKEYSLRQLLELIDLRENAFSAVGSHSQAVPVLVSLLRSGSLNVKIQAATVLGSLCKENELRVKVLLGGCIPPLLGLLKSSSTEGQIAAAKTIYAVSQGGVKDHVGSKIFSTEGVVPVLWEQLKTGLKAGNVVEGLLTGALKNLSSNTEGFWNATIRAGAVDILVKLLATGQPSSLANVCNLLASVMVEDASVCSKVLTAEVTKQLLKLLGPGNDDSVRAEAAGALNSLSAQCKEARREIANANGIPALINATIAPSKEYMQGECAQALQENAMCALANISGGLSFVISSLGQSLESCTSPTQIADTLGALASALMIYDNKAESSRASDPLVVEQTLLKQFKPRLPFLVQERTIEALASLYGNSILSNKLANSDAKHLLVGLITMAANEVQDELIKALLTLCKSEGSLWRALQGREGVQLLISLLGLSSEQQQECAVALLCLLSYENDESKWAITAAGGIPPLVQILETGSAKAKEDSATILKNLCNHSEDIRACVESADAVPALLWLLKNGSPNGKDIAAKTLNHLIHKSDTTTISQLTALLTSDLPDSKVYVLDALRSMLSVAPLSEILREGSASSDAFDTMIILLSSTKEETQEKSASALAGIFETRKDVRESSIAVKTLLSAMKLLNAESESILIESSHCLAAIFLSIKENRDVAAVARDTLSTLVALANSSVLEVAEMATCALANLILDSEIAEKAIAEEVILPATRILCEGTISGKTHAAAAIARLLHSRDVDYAVTDCVNRAGTVLALVSFLDSAVNGSVATSEALEALAILSRSEETSANIKSACAVLAEFPKSISPIVLCIVDSEPTLQDKTIEILSRLCKDQPVVLGDTIVSAPGCISSIAKRIISSTDVKAKIGGAALLICTAKANHQRLVEDLHSSNLCADLIRSLVDMLTSAQPSLGYLDDDNKEFISICRYTREEANGCESNTSTSIICGADLAIWLLSILACHDEKNKIAIMEAGAIDVLIDRISNCFSQYSQIEYKEDSSMWIHALLLAILFQNRDIIRAHPTIKSVPALTSLLKSEESANKYFAAQSIASLVCNGSRGTLLSVANSGAAGGLISLLGCADTDIQDLLELSEEFSLVRYPDQVALERLFRVDDIRVGATSRKAIPALVDLLKPIPDRPGAPFLALGLLTQLGKDCPSNMSVMVESGALEALTKYLSLSPQDATEEAATDLLGILFSSAEIRKHESAYGAVAQLVAVLRLGGRGARYSAAKALESLFSADHIRNAEIARQAVQPLVEILSTGSEKEQHAAIAALVGLLSENPSRALAVADVEMNAVEVLCRIISSNCSIDLKGDAAELCCALFGNTRIRSTAAAACCVEPLVSLLVTQFSPAQLSVVRALDRLVDDEQLAELVAAHGAVVPLVGLLSGRNYILHEAISRALVKLGKDRPACKVEMVKVGVIESVLDILHEGPDYLCAAFAELLRILTNNASIAKGPSAAKVVEPLFLLLTRQEFGPDGQHSALQVLVNILEHPQCRADHSLTSRQVIEPLIHLLDSPISAVQQLAAELLSHLLVEERLQKDPVTQQAIGPLVRVLGSGIHILQQRAVKALVSIALTWPNEIAKEGGVIEISKVILQADPSLPHALWESAASVLSSILQFSSEFYLEVPIAVLVRLLRSGSDSTVVGALNALLVLENDDGTSAEAMAESGAIEALLELLRSHQCEEIAARLLEVLLNNVKIRETKVTKSAIVPLSQYLLDPQTQAQQARLLATLALGDLFQNEALARTSDAVSACRALVNVLEEQPTEEMKVVAICALQNLVMYSRSNRRAVAEAGGVQVVLDLIGSSDPETSIQAAMFVKLLFSNNTIQEYASSETVRAITAAIEKDLWASGTVNDEYLKALNSLFTNFPRLRATEPATLSIPHLVTALKTGSEACQEAALDALFLLRQAWSACPAEVSRAQSIAAADAIPLLQYLIQSGPPRFQEKAEFLLQCLPGTLVVIIKRGNNMKQSVGNPSVYCKLTLGNTPPRQTQVVSTGPNPEWGESFSWTFESPPKGQKLHISCKNKSKVGKSKFGKVTIQIDRVVMLGSVAGEYALLPQSKSGPPRNLEIEFQWSNK*

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