Glyma08g14720 - SoyBase

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Report for Sequence Feature Glyma08g14720

Feature Type:	gene_model
Chromosome:	Gm08
Start:	10717260
stop:	10721014
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma08g14720

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT2G22250	AT	Annotation by Michelle Graham. TAIR10: aspartate aminotransferase \| chr2:9458011-9460028 REVERSE LENGTH=428	SoyBase	E_val: 0	ISS
GO:0009095	GO-bp	Annotation by Michelle Graham. GO Biological Process: aromatic amino acid family biosynthetic process, prephenate pathway	SoyBase	N/A	ISS
GO:0009793	GO-bp	Annotation by Michelle Graham. GO Biological Process: embryo development ending in seed dormancy	SoyBase	N/A	ISS
GO:0009507	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: chloroplast	SoyBase	N/A	ISS
GO:0009570	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: chloroplast stroma	SoyBase	N/A	ISS
GO:0004069	GO-mf	Annotation by Michelle Graham. GO Molecular Function: L-aspartate:2-oxoglutarate aminotransferase activity	SoyBase	N/A	ISS
GO:0033853	GO-mf	Annotation by Michelle Graham. GO Molecular Function: aspartate-prephenate aminotransferase activity	SoyBase	N/A	ISS
GO:0033854	GO-mf	Annotation by Michelle Graham. GO Molecular Function: glutamate-prephenate aminotransferase activity	SoyBase	N/A	ISS
KOG0257	KOG	Kynurenine aminotransferase, glutamine transaminase K	JGI		ISS
PTHR11751	Panther	SUBGROUP I AMINOTRANSFERASE RELATED	JGI		ISS
PTHR11751:SF35	Panther	AMINOTRANSFERASE	JGI		ISS
PF00155	PFAM	Aminotransferase class I and II	JGI		ISS
UniRef100_G7LAD1	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Aspartate aminotransferase n=1 Tax=Medicago truncatula RepID=G7LAD1_MEDTR	SoyBase	E_val: 0	ISS
UniRef100_I1KT56	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1KT56_SOYBN	SoyBase	E_val: 0	ISS

Expression Patterns of Glyma08g14720

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Paralogs of Glyma08g14720

Paralog	Evidence	Comments
Glyma05g31490	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.

Gene model name correspondences to Glyma08g14720 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.08g138800	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma08g14720

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Transcripts of Glyma08g14720

Limit To All Plant Sequences

>Glyma08g14720.2   sequence type=transcript   gene model=Glyma08g14720   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
TTCCATGAACTTTTTCAATAGAGTTAAATTATCAAATTTGAAATGAATGTGAAGGTGAAGAAGAGTTTCACCAACCCACCCCACCCCATCCCACCAAACTCCCTCTACCTACCGCTATTCAACCTCCTTCTTCTTCTTCTTCTTCTTCTCATCTTTCTTATTTTTCAGTAACCCCTTCTCTCCCAAAATCTCCCTCTGTTCAGTTTCAATATGGCGAACACACTATATAACGGCGCCACATGCCGAATCCCTCTCCGTGATGAATCCCTGGCCTTCTCTCGCCACGTTTCCAGATCCCTCTCTTTCCTCCTCAAAACACGTGCGGGAAAACAATCATACGCATTTGCGGTTAAGGCTTCTTCGCACTCTGACTTCGACGTTGACCTTTCGCTCAGTCCACGTGTCAATGCCGTCAAGCCTTCCAAAACCGTCGCCATCAGCGACCACGCCACCGCTCTCTTCCAAGCCGGCGTTCCCGTCATTCGCCTCGCCGCCGGCGAGCCCGATTTCGACACGCCCGCTCCCATAGCTGAGGCTGGGATTAATGCAATTCGCGAAGGTTACACGAGGTACACGCCCAATGCCGGAACCATGGAACTGCGCCAAGCGATTTGTCGCAAGCTTAAAGAGGAGAATGGGATTAGTTATACTCCTGACCAAGTTGTGGTTAGTAACGGAGCCAAACAGAGCATTGCTCAGGCAGTGCTTGCAGTTTGCTCCCCCGGAGATGAGGTTATTATTCCAGCTCCATTCTGGGTTAGTTACCCAGAAATGGCAAGGTTGGCTGATGCGACACCTGTGATTCTTCCAACCTTAATATCTGATAATTTCCTTTTGGATCCCAAACTTCTTGAATCCAAAATTACTGAAAGATCGAGACTGCTCATTCTTTGTTCACCATCTAACCCAACAGGATCTGTCTACCCTAAAGAATTACTTGAAGAGATAGCCCGGATTGTTGCAAAGCACCCCAGGCTCCTGGTTCTCTCCGATGAAATTTATGAACACATAATTTATGCACCAGCAACTCACACAAGTTTTGCATCTTTACCAGGAATGTGGGACAGAACTCTTACTGTGAATGGATTTTCCAAGGCCTTTGCAATGACTGGTTGGCGGCTTGGATATATTGCTGGTCCAAAACATTTTGTTGCAGCATGTGGAAAGATCCAAAGTCAGGGGCCAGTAGTATAGCTCAGAAAGCTGCAGTTGCTGCATTAGGACTAGGCCATGCTGGTGGGGAGGCAGTTTCTACCATGGTGAAAGCATTTAGGGAGCGAAGGGATTTCTTGGTAAAAAGTTTTAGAGAAATAGATGGTGTCAAGATATCTGAACCCCAGGGAGCATTTTATCTATTCCTTGATTTCAGCTTCTATTATGGAAGAGAAGCTGAAGGATTCGGTAAAATTGAGGATTCTGAGTCCCTCTGTCGATATCTACTGGATGTGGGCCAGGTAGCCCTGGTGCCAGGGAGTGCATTTGGAGATGACACTTGCATCCGCATCTCTTATGCAGAATCCCTTACTACCCTACAGGCAGCTGTAGAAAGAGTTAAGAGAGCACTTATCCCGCTGAGCTCTGCTGCACTTGTTTAATATTGCTGTTTTGTTGTAATGGGTGTATTTTATTTTTATTTTAATTTTGGCAATGTGTAATCTGTTTATTCTGAAAATATTAGGCTTTGGATATTCTTCCATAAAATGAAGTGATACAACTGTCTTTAATGGTTTAAAATTATAACAACAAAATTGTCCTCCTTTTATGTAACATATGTCTCGAAGCGAAGGGGAAGCAAATAAACTGGCGTTCAATGGCTACAATCTGAAAAGGGTGTGGTAATTTTTG

>Glyma08g14720.3   sequence type=transcript   gene model=Glyma08g14720   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
TTCCATGAACTTTTTCAATAGAGTTAAATTATCAAATTTGAAATGAATGTGAAGGTGAAGAAGAGTTTCACCAACCCACCCCACCCCATCCCACCAAACTCCCTCTACCTACCGCTATTCAACCTCCTTCTTCTTCTTCTTCTTCTTCTCATCTTTCTTATTTTTCAGTAACCCCTTCTCTCCCAAAATCTCCCTCTGTTCAGTTTCAATATGGCGAACACACTATATAACGGCGCCACATGCCGAATCCCTCTCCGTGATGAATCCCTGGCCTTCTCTCGCCACGTTTCCAGATCCCTCTCTTTCCTCCTCAAAACACGTGCGGGAAAACAATCATACGCATTTGCGGTTAAGGCTTCTTCGCACTCTGACTTCGACGTTGACCTTTCGCTCAGTCCACGTGTCAATGCCGTCAAGCCTTCCAAAACCGTCGCCATCAGCGACCACGCCACCGCTCTCTTCCAAGCCGGCGTTCCCGTCATTCGCCTCGCCGCCGGCGAGCCCGATTTCGACACGCCCGCTCCCATAGCTGAGGCTGGGATTAATGCAATTCGCGAAGGTTACACGAGGTACACGCCCAATGCCGGAACCATGGAACTGCGCCAAGCGATTTGTCGCAAGCTTAAAGAGGAGAATGGGATTAGTTATACTCCTGACCAAGTTGTGGTTAGTAACGGAGCCAAACAGAGCATTGCTCAGGCAGTGCTTGCAGTTTGCTCCCCCGGAGATGAGGTTATTATTCCAGCTCCATTCTGGGTTAGTTACCCAGAAATGGCAAGGTTGGCTGATGCGACACCTGTGATTCTTCCAACCTTAATATCTGATAATTTCCTTTTGGATCCCAAACTTCTTGAATCCAAAATTACTGAAAGATCGAGACTGCTCATTCTTTGTTCACCATCTAACCCAACAGGATCTGTCTACCCTAAAGAATTACTTGAAGAGATAGCCCGGATTGTTGCAAAGCACCCCAGGCTCCTGGTTCTCTCCGATGAAATTTATGAACACATAATTTATGCACCAGCAACTCACACAAGTTTTGCATCTTTACCAGGAATGTGGGACAGAACTCTTACTGTGAATGGATTTTCCAAGGCCTTTGCAATGACTGGTTGGCGGCTTGGATATATTGCTGGTCCAAAACATTTTGTTGCAGCATGTGGAAAGATCCAAAGTCAGGTATGCTACATTTTTTATTGGCCACTTTCGTAAGCCTTACCCTATACAAGTATACATCATACATTTTTTTATTTCCTTTTGCTACATCCTCCATGACATCTTACAGATTCTTAGGTTTAACAGATTCAGCATTTGAGAGGAAACTCAAAGAAATTTTCTAGCCTTCATTTGGAATTAGTTGGACTATTGCTGCTAGTTAATATTATATGCAGTATATACTGGCTGATGCATCTTATTGAATTTAGTTCACTTCAGGGGCCAGTAGTATAGCTCAGAAAGCTGCAGTTGCTGCATTAGGACTAGGCCATGCTGGTGGGGAGGCAGTTTCTACCATGGTGAAAGCATTTAGGGAGCGAAGGGATTTCTTGGTAAAAAGTTTTAGAGAAATAGATGGTGTCAAGATATCTGAACCCCAGGGAGCATTTTATCTATTCCTTGATTTCAGCTTCTATTATGGAAGAGAAGCTGAAGGATTCGGTAAAATTGAGGATTCTGAGTCCCTCTGTCGATATCTACTGGATGTGGGCCAGGTAGCCCTGGTGCCAGGGAGTGCATTTGGAGATGACACTTGCATCCGCATCTCTTATGCAGAATCCCTTACTACCCTACAGGCAGCTGTAGAAAGAGTTAAGAGAGCACTTATCCCGCTGAGCTCTGCTGCACTTGTTTAATATTGCTGTTTTGTTGTAATGGGTGTATTTTATTTTTATTTTAATTTTGGCAATGTGTAATCTGTTTATTCTGAAAATATTAGGCTTTGGATATTCTTCCATAAAATGAAGTGATACAACTGTCTTTAATGGTTTAAAATTATAACAACAAAATTGTCCTCCTTTTATGTAACATATGTCTCGAAGCGAAGGGGAAGCAAATAAACTGGCGTTCAATGGCTACAATCTGAAAAGGGTGTGGTAATTTTTG

Coding sequences of Glyma08g14720

Limit To All Plant Sequences

>Glyma08g14720.1   sequence type=CDS   gene model=Glyma08g14720   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGCGAACACACTATATAACGGCGCCACATGCCGAATCCCTCTCCGTGATGAATCCCTGGCCTTCTCTCGCCACGTTTCCAGATCCCTCTCTTTCCTCCTCAAAACACGTGCGGGAAAACAATCATACGCATTTGCGGTTAAGGCTTCTTCGCACTCTGACTTCGACGTTGACCTTTCGCTCAGTCCACGTGTCAATGCCGTCAAGCCTTCCAAAACCGTCGCCATCAGCGACCACGCCACCGCTCTCTTCCAAGCCGGCGTTCCCGTCATTCGCCTCGCCGCCGGCGAGCCCGATTTCGACACGCCCGCTCCCATAGCTGAGGCTGGGATTAATGCAATTCGCGAAGGTTACACGAGGTACACGCCCAATGCCGGAACCATGGAACTGCGCCAAGCGATTTGTCGCAAGCTTAAAGAGGAGAATGGGATTAGTTATACTCCTGACCAAGTTGTGGTTAGTAACGGAGCCAAACAGAGCATTGCTCAGGCAGTGCTTGCAGTTTGCTCCCCCGGAGATGAGGTTATTATTCCAGCTCCATTCTGGGTTAGTTACCCAGAAATGGCAAGGTTGGCTGATGCGACACCTGTGATTCTTCCAACCTTAATATCTGATAATTTCCTTTTGGATCCCAAACTTCTTGAATCCAAAATTACTGAAAGATCGAGACTGCTCATTCTTTGTTCACCATCTAACCCAACAGGATCTGTCTACCCTAAAGAATTACTTGAAGAGATAGCCCGGATTGTTGCAAAGCACCCCAGGCTCCTGGTTCTCTCCGATGAAATTTATGAACACATAATTTATGCACCAGCAACTCACACAAGTTTTGCATCTTTACCAGGAATGTGGGACAGAACTCTTACTGTGAATGGATTTTCCAAGGCCTTTGCAATGACTGGTTGGCGGCTTGGATATATTGCTGGTCCAAAACATTTTGTTGCAGCATGTGGAAAGATCCAAAGTCAGTTCACTTCAGGGGCCAGTAGTATAGCTCAGAAAGCTGCAGTTGCTGCATTAGGACTAGGCCATGCTGGTGGGGAGGCAGTTTCTACCATGGTGAAAGCATTTAGGGAGCGAAGGGATTTCTTGGTAAAAAGTTTTAGAGAAATAGATGGTGTCAAGATATCTGAACCCCAGGGAGCATTTTATCTATTCCTTGATTTCAGCTTCTATTATGGAAGAGAAGCTGAAGGATTCGGTAAAATTGAGGATTCTGAGTCCCTCTGTCGATATCTACTGGATGTGGGCCAGGTAGCCCTGGTGCCAGGGAGTGCATTTGGAGATGACACTTGCATCCGCATCTCTTATGCAGAATCCCTTACTACCCTACAGGCAGCTGTAGAAAGAGTTAAGAGAGCACTTATCCCGCTGAGCTCTGCTGCACTTGTTTAA

>Glyma08g14720.2   sequence type=CDS   gene model=Glyma08g14720   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGCGAACACACTATATAACGGCGCCACATGCCGAATCCCTCTCCGTGATGAATCCCTGGCCTTCTCTCGCCACGTTTCCAGATCCCTCTCTTTCCTCCTCAAAACACGTGCGGGAAAACAATCATACGCATTTGCGGTTAAGGCTTCTTCGCACTCTGACTTCGACGTTGACCTTTCGCTCAGTCCACGTGTCAATGCCGTCAAGCCTTCCAAAACCGTCGCCATCAGCGACCACGCCACCGCTCTCTTCCAAGCCGGCGTTCCCGTCATTCGCCTCGCCGCCGGCGAGCCCGATTTCGACACGCCCGCTCCCATAGCTGAGGCTGGGATTAATGCAATTCGCGAAGGTTACACGAGGTACACGCCCAATGCCGGAACCATGGAACTGCGCCAAGCGATTTGTCGCAAGCTTAAAGAGGAGAATGGGATTAGTTATACTCCTGACCAAGTTGTGGTTAGTAACGGAGCCAAACAGAGCATTGCTCAGGCAGTGCTTGCAGTTTGCTCCCCCGGAGATGAGGTTATTATTCCAGCTCCATTCTGGGTTAGTTACCCAGAAATGGCAAGGTTGGCTGATGCGACACCTGTGATTCTTCCAACCTTAATATCTGATAATTTCCTTTTGGATCCCAAACTTCTTGAATCCAAAATTACTGAAAGATCGAGACTGCTCATTCTTTGTTCACCATCTAACCCAACAGGATCTGTCTACCCTAAAGAATTACTTGAAGAGATAGCCCGGATTGTTGCAAAGCACCCCAGGCTCCTGGTTCTCTCCGATGAAATTTATGAACACATAATTTATGCACCAGCAACTCACACAAGTTTTGCATCTTTACCAGGAATGTGGGACAGAACTCTTACTGTGAATGGATTTTCCAAGGCCTTTGCAATGACTGGTTGGCGGCTTGGATATATTGCTGGTCCAAAACATTTTGTTGCAGCATGTGGAAAGATCCAAAGTCAGGGGCCAGTAGTATAG

>Glyma08g14720.3   sequence type=CDS   gene model=Glyma08g14720   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGCGAACACACTATATAACGGCGCCACATGCCGAATCCCTCTCCGTGATGAATCCCTGGCCTTCTCTCGCCACGTTTCCAGATCCCTCTCTTTCCTCCTCAAAACACGTGCGGGAAAACAATCATACGCATTTGCGGTTAAGGCTTCTTCGCACTCTGACTTCGACGTTGACCTTTCGCTCAGTCCACGTGTCAATGCCGTCAAGCCTTCCAAAACCGTCGCCATCAGCGACCACGCCACCGCTCTCTTCCAAGCCGGCGTTCCCGTCATTCGCCTCGCCGCCGGCGAGCCCGATTTCGACACGCCCGCTCCCATAGCTGAGGCTGGGATTAATGCAATTCGCGAAGGTTACACGAGGTACACGCCCAATGCCGGAACCATGGAACTGCGCCAAGCGATTTGTCGCAAGCTTAAAGAGGAGAATGGGATTAGTTATACTCCTGACCAAGTTGTGGTTAGTAACGGAGCCAAACAGAGCATTGCTCAGGCAGTGCTTGCAGTTTGCTCCCCCGGAGATGAGGTTATTATTCCAGCTCCATTCTGGGTTAGTTACCCAGAAATGGCAAGGTTGGCTGATGCGACACCTGTGATTCTTCCAACCTTAATATCTGATAATTTCCTTTTGGATCCCAAACTTCTTGAATCCAAAATTACTGAAAGATCGAGACTGCTCATTCTTTGTTCACCATCTAACCCAACAGGATCTGTCTACCCTAAAGAATTACTTGAAGAGATAGCCCGGATTGTTGCAAAGCACCCCAGGCTCCTGGTTCTCTCCGATGAAATTTATGAACACATAATTTATGCACCAGCAACTCACACAAGTTTTGCATCTTTACCAGGAATGTGGGACAGAACTCTTACTGTGAATGGATTTTCCAAGGCCTTTGCAATGACTGGTTGGCGGCTTGGATATATTGCTGGTCCAAAACATTTTGTTGCAGCATGTGGAAAGATCCAAAGTCAGGTATGCTACATTTTTTATTGGCCACTTTCGTAA

Predicted protein sequences of Glyma08g14720

Limit To All Plant Sequences

>Glyma08g14720.1   sequence type=predicted peptide   gene model=Glyma08g14720   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MANTLYNGATCRIPLRDESLAFSRHVSRSLSFLLKTRAGKQSYAFAVKASSHSDFDVDLSLSPRVNAVKPSKTVAISDHATALFQAGVPVIRLAAGEPDFDTPAPIAEAGINAIREGYTRYTPNAGTMELRQAICRKLKEENGISYTPDQVVVSNGAKQSIAQAVLAVCSPGDEVIIPAPFWVSYPEMARLADATPVILPTLISDNFLLDPKLLESKITERSRLLILCSPSNPTGSVYPKELLEEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWDRTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACGKIQSQFTSGASSIAQKAAVAALGLGHAGGEAVSTMVKAFRERRDFLVKSFREIDGVKISEPQGAFYLFLDFSFYYGREAEGFGKIEDSESLCRYLLDVGQVALVPGSAFGDDTCIRISYAESLTTLQAAVERVKRALIPLSSAALV*

>Glyma08g14720.2   sequence type=predicted peptide   gene model=Glyma08g14720   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MANTLYNGATCRIPLRDESLAFSRHVSRSLSFLLKTRAGKQSYAFAVKASSHSDFDVDLSLSPRVNAVKPSKTVAISDHATALFQAGVPVIRLAAGEPDFDTPAPIAEAGINAIREGYTRYTPNAGTMELRQAICRKLKEENGISYTPDQVVVSNGAKQSIAQAVLAVCSPGDEVIIPAPFWVSYPEMARLADATPVILPTLISDNFLLDPKLLESKITERSRLLILCSPSNPTGSVYPKELLEEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWDRTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACGKIQSQGPVV*

>Glyma08g14720.3   sequence type=predicted peptide   gene model=Glyma08g14720   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MANTLYNGATCRIPLRDESLAFSRHVSRSLSFLLKTRAGKQSYAFAVKASSHSDFDVDLSLSPRVNAVKPSKTVAISDHATALFQAGVPVIRLAAGEPDFDTPAPIAEAGINAIREGYTRYTPNAGTMELRQAICRKLKEENGISYTPDQVVVSNGAKQSIAQAVLAVCSPGDEVIIPAPFWVSYPEMARLADATPVILPTLISDNFLLDPKLLESKITERSRLLILCSPSNPTGSVYPKELLEEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWDRTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACGKIQSQVCYIFYWPLS*

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