Report for Sequence Feature Glyma08g14710
Feature Type: gene_model
Chromosome: Gm08
Start: 10713401
stop: 10715387
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma08g14710
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT4G39810 AT
Annotation by Michelle Graham. TAIR10: Polynucleotidyl transferase, ribonuclease H-like superfamily protein | chr4:18474608-18475735 REVERSE LENGTH=255
SoyBase E_val: 9.00E-120 ISS
GO:0005622 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: intracellular
SoyBase N/A ISS
GO:0005737 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm
SoyBase N/A ISS
GO:0003676 GO-mf
Annotation by Michelle Graham. GO Molecular Function: nucleic acid binding
SoyBase N/A ISS
GO:0004527 GO-mf
Annotation by Michelle Graham. GO Molecular Function: exonuclease activity
SoyBase N/A ISS
PF00929 PFAM
Exonuclease
JGI ISS
UniRef100_G7LAD2 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: DNA polymerase III polC-type n=1 Tax=Medicago truncatula RepID=G7LAD2_MEDTR
SoyBase E_val: 1.00E-174 ISS
UniRef100_UPI0002338738 UniRef
Annotation by Michelle Graham. Best UniRef hit: UPI0002338738 related cluster n=1 Tax=unknown RepID=UPI0002338738
SoyBase E_val: 0 ISS
Expression Patterns of Glyma08g14710
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Paralogs of Glyma08g14710
Paralog Evidence Comments
Glyma05g31480 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma08g14710 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.08g138700 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma08g14710
Coding sequences of Glyma08g14710
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma08g14710.2 sequence type=CDS gene model=Glyma08g14710 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGACGTCTCTTATTCATGCAATGAACAACAAGCACCCGAGATCGTTTTCTTTGATTTGGAAACTACAGTGCCCAAAAAGGGTGGAGAGCGTTTCTGGGTTCTGGAGTTTGGTGCAATTGTGGTCACACCCCACAAACTCACCGAGATTGAGAGCTACACCACGCTGATAAGACCCAAAGACCTATCTGTGGTGTCAGTGAAATCCAGCAGAAGTGATGGAATAACTCGTAAAGCTGTTGAAAATGCACCATCTTTTGAAGATGTTGCAGACAGAATATTCAGTATCTTGAATGGAAGGGTGTGGGCGGGGCATAACATCCAGAGATTTGACTGTGTTCGAATCAAAGAGGCCTTTGATGATATCAATAGGCCAGCACCGGTTCCAGTTGGAATCATTGATTCTCTTGGGGTCCTAACTGAGAAGTTTGGAAGAAGAGCTGGTAACATGAAGATGGCAACACTGGCTTCTTATTTTGGCCTGGGCCAACAAAAACACAGGAGCCTGGATGATGTTCGCATGAACCTGGAGGTGCTTAAGCACTGTGCAACGGTGTTGTTTCTGGAATCTAGTCTACCAAACATGTTGCATAGCAAATCGCATGGATCTCCCAGCGTTATGACGCGAAGCAGAAGCAATGGGAAATCACCCTGCAAGGAAGAGACTAGCAGAAAATCTCCCCCAGCTACGTTAGGATATCAGAGGACAGTCCCCTATGCTAGGGGAAGTTTGGGAAAGGTGACCGAAAGTGTGAAGGGATTGTTGTGTAAAGCACAAGGGCAACCACCACTTCAACAACTACTCAAGCATTCTCATTCATTACTAAGGTGA
Predicted protein sequences of Glyma08g14710
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma08g14710.2 sequence type=predicted peptide gene model=Glyma08g14710 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MDVSYSCNEQQAPEIVFFDLETTVPKKGGERFWVLEFGAIVVTPHKLTEIESYTTLIRPKDLSVVSVKSSRSDGITRKAVENAPSFEDVADRIFSILNGRVWAGHNIQRFDCVRIKEAFDDINRPAPVPVGIIDSLGVLTEKFGRRAGNMKMATLASYFGLGQQKHRSLDDVRMNLEVLKHCATVLFLESSLPNMLHSKSHGSPSVMTRSRSNGKSPCKEETSRKSPPATLGYQRTVPYARGSLGKVTESVKGLLCKAQGQPPLQQLLKHSHSLLR*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
