Glyma08g13760 - SoyBase

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Report for Sequence Feature Glyma08g13760

Feature Type:	gene_model
Chromosome:	Gm08
Start:	10063057
stop:	10063779
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma08g13760

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT1G24480	AT	Annotation by Michelle Graham. TAIR10: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein \| chr1:8676440-8677159 REVERSE LENGTH=239	SoyBase	E_val: 3.00E-120	ISS
GO:0008152	GO-bp	Annotation by Michelle Graham. GO Biological Process: metabolic process	SoyBase	N/A	ISS
GO:0005576	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: extracellular region	SoyBase	N/A	ISS
GO:0008168	GO-mf	Annotation by Michelle Graham. GO Molecular Function: methyltransferase activity	SoyBase	N/A	ISS
PTHR10108	Panther	METHYLTRANSFERASE	JGI		ISS
PTHR10108:SF156	Panther	METHYLTRANSFERASE	JGI		ISS
PF08241	PFAM	Methyltransferase domain	JGI		ISS
UniRef100_I1KSU9	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein (Fragment) n=2 Tax=Glycine max RepID=I1KSU9_SOYBN	SoyBase	E_val: 8.00E-164	ISS
UniRef100_Q9FYL5	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: F21J9.14 n=2 Tax=Arabidopsis thaliana RepID=Q9FYL5_ARATH	SoyBase	E_val: 1.00E-117	ISS

Expression Patterns of Glyma08g13760

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma08g13760 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments

References for Glyma08g13760

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma08g13760

Limit To All Plant Sequences

>Glyma08g13760.1   sequence type=CDS   gene model=Glyma08g13760   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAACATCTCACTCACAAAACCATTCATCCTAAGATGCTTCCTCATCTCCCTCTTCCTCTCCCTACCCTTCCTCTTCCTCTTCCTCCACCTCCTCTCTCCGCCGCCACACGTCACCACCACCACCAACGACCTAAGAATCCGACCCGGTTACTCCTCCTACGACTCCTACATCCAACGCCAGCTCAACAAGACCCTCAACCCGCGCCTCCGAAAAATATGGACAACCCGCGACTGGAACCGCAAAATCCCGGTTTTCGCGCGCTTCTTCGAGGACCTTAAGGATAAAAAACTTCTCAATAACGCGTCCAAGGCACTCTGCATAGGCGCGCGCGTGGGCCAAGAGGTGGAGGCGCTGAGGCGAATCGGCGTTAGTGACTCCGTTGGAATGGACCTCGTTCCATACCCTCCGCTTGTCGTTAAGGGTGACTTTCACAACCAGCCGTTTGATGACGGCACGTTCGATTTCGAATTCTCGAACGTGTTCGATCACGCGCTGTACCCGGAACGATTCGTGGGCGAGATCGAACGCACGTTGAAGCCCAACGGCGTGTGCGTGCTGCACGTGGCGCTGTCGAGACGCGCGGATAAGTACTCCGCTAACGACCTCTTCAGCGTGGAGCCCCTCGTAGCGATGTTTAAGAACTCCGCTCTGGTTCACGTTCGTAGCGTCGATGGTTTTGGATTGGACACCGAGGTTGCGTTTCGTAAGAACGTACATTGA

Predicted protein sequences of Glyma08g13760

Limit To All Plant Sequences

>Glyma08g13760.1   sequence type=predicted peptide   gene model=Glyma08g13760   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MNISLTKPFILRCFLISLFLSLPFLFLFLHLLSPPPHVTTTTNDLRIRPGYSSYDSYIQRQLNKTLNPRLRKIWTTRDWNRKIPVFARFFEDLKDKKLLNNASKALCIGARVGQEVEALRRIGVSDSVGMDLVPYPPLVVKGDFHNQPFDDGTFDFEFSNVFDHALYPERFVGEIERTLKPNGVCVLHVALSRRADKYSANDLFSVEPLVAMFKNSALVHVRSVDGFGLDTEVAFRKNVH*

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