Report for Sequence Feature Glyma08g13260
Feature Type: gene_model
Chromosome: Gm08
Start: 9694378
stop: 9697945
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma08g13260
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT3G16030 AT
Annotation by Michelle Graham. TAIR10: lectin protein kinase family protein | chr3:5439609-5442802 FORWARD LENGTH=850
SoyBase E_val: 9.00E-166 ISS
GO:0006468 GO-bp
Annotation by Michelle Graham. GO Biological Process: protein phosphorylation
SoyBase N/A ISS
GO:0005886 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane
SoyBase N/A ISS
GO:0004672 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein kinase activity
SoyBase N/A ISS
GO:0004674 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein serine/threonine kinase activity
SoyBase N/A ISS
GO:0004713 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein tyrosine kinase activity
SoyBase N/A ISS
GO:0005524 GO-mf
Annotation by Michelle Graham. GO Molecular Function: ATP binding
SoyBase N/A ISS
GO:0016301 GO-mf
Annotation by Michelle Graham. GO Molecular Function: kinase activity
SoyBase N/A ISS
GO:0016772 GO-mf
Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring phosphorus-containing groups
SoyBase N/A ISS
GO:0030246 GO-mf
Annotation by Michelle Graham. GO Molecular Function: carbohydrate binding
SoyBase N/A ISS
KOG1187
KOG
Serine/threonine protein kinase
JGI ISS
PTHR24420 Panther
FAMILY NOT NAMED
JGI ISS
PTHR24420:SF430 Panther
SUBFAMILY NOT NAMED
JGI ISS
PF01453 PFAM
D-mannose binding lectin
JGI ISS
PF07714 PFAM
Protein tyrosine kinase
JGI ISS
UniRef100_G7LA07 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Serine/threonine protein kinase n=1 Tax=Medicago truncatula RepID=G7LA07_MEDTR
SoyBase E_val: 0 ISS
UniRef100_UPI0002338438 UniRef
Annotation by Michelle Graham. Best UniRef hit: UPI0002338438 related cluster n=1 Tax=unknown RepID=UPI0002338438
SoyBase E_val: 0 ISS
Expression Patterns of Glyma08g13260
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Gene model name correspondences to Glyma08g13260 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.08g125800 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma08g13260
Transcripts of Glyma08g13260
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma08g13260.3 sequence type=transcript gene model=Glyma08g13260 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATTAATTCCAAACCAATAGAGACTATATATCATATATCTTACATATAGAATAAACATCTTGCAATCTAAAGTATTCGAAGATGGTGATCTGTTATAAACAGCTGGGAGAATATCATTTCTTTCTTGTTTTGCTTCTCATTTCAGTCCAATGCGTTATTGCCGCAAATAACATTTTGAAGCCCGGAGATACACTGAATACGAGAAGCCAGCTATGTTCAGAAAACAACATATACTGCATGGATTTTTCCCCATTAAACACAAATCCTATTGTAAACTACACTCACTTAAGCATCAGTGACAACAGAAAGGACGATAATTCCGCAGTGTGGGTTGCTAATAGAAATCAACCCGTTGACAAGCATTCTGCAGTTCTGATGCTAAACCACTCTGGTGTACTCAAAATTGAATCATCCAAAGATGCCAAACCCATCATCCTTTTTTCTTCACCTCAACCACTGAACAACAACAACACCGAAGCCAAGCTGTTGGATACAGGTAACTTTGTGGTGCAACAACTTCACCCCAATGGAACAAACACTGTGTTGTGGCAAAGTTTTGATTACCCTACTGATACTCTTCTCCCTGGGATGAAGTTAGGAGTTAATCACAAAACTGGTCATAACTGGTCACTTGTTTCGTGGTTGGCTGTATCCGACCCCAGAATCGGGGCATTCAGGTTCGAGTGGGAACCCATAAGAAGAGAATTGATCATCAAGGAACGAGGAAGATTGTCCTGGACAAGTGGAGAACTCAGAAACAACAATGGATCCATTCACAACACCAAGTACACGATTGTCTCAAACGACGACGAAAGCTACTTCACAATTACAACAACAAGTTCAAATGAACAAGAGCTTATAATGTGGGAAGTATTGGAAACTGGGCGGTTGATAGATAGGAATAAAGAAGCTATTGCAAGGGCTGATATGTGTTATGGTTACAACACAGATGGAGGGTGCCAAAAGTGGGAGGAGATACCCACATGTAGGCATAGCGGTGATGCATTTGAAACCAGGGAAGTTTACGTCAGTATGAACATGCTAAACAATCTAGGTAATTCGAGTTATGGCCCAAGTGATTGCCGGGATATTTGCTGGGAAAATTGTGCTTGTAATGGATACAGAAATTACTATGATGGTGGAACTGGTTGTACTTTCTTGCATTGGAATTCAACCGAAGAAGCTAATTTTGCAAGTGGGGGCGAAACGTTTCATATATTGGTCAACAACACCCACCACAAAGGTACAAAAAAGTGGATATGGATAACTGTAGCAGTAGTTGTTCCATTTGTGATATGTGCTTTCATTCTATTTCTGGCCTTGAAGAAAAGAAAACATCTGTTTGAAGAGAAGAAAAGAAATAGAATGGAGACTGGGATGTTGGATTCGGCAATTAAAGATCTTGAAGATGAGTTCAAGAAGAGACAAAATCTAAAAGTATTTAAGTATACTTCAGTACTGTCGGCAACCAATGATTTTTCACCAGAAAACAAGTTAGGACAAGGAGGCTTTGGACCAGTTTATAAGGGAATCCTACCAACTGGGCAAGAAGCTGCTATTAAAAGACTTTCAAAAACATCTAGACAAGGGGTTGTGGAATTCAAAAATGAGCTAATGCTCATATGTGAACTTCAACACATGAATCTTGTACAACTACTTGGATGCTGCATTCATGAAGAAGAGAGGATTCTAATTTATGAGTATATGCCAAACAAAAGCTTGGATTTCTATCTATTCGGTATGGAATATGGTGCAGTCTATTTAATTAGGATATGCTTTAAATTGGAAAAGGCAAATTAAGACAATATTTTTTAATTATCATGTACCAACCGATGCCATCGTACGTGGAGGGAAACATTAAGTTGGCTCAACGAAGTTTTCAGTAATTGTTATAGATGTATATATGATTCATTGCCTTATGCTTTCCTATCTGAACATAACTACATAAATGTCACACACACACACTAAAAGATTGCTTTATTTCTAACAACATGCATATTGCTTCATTAACACTAAGAAGATTGCACTCGAAGCAAGTTACTAGATTGGAAGAAGCGTTTCAACATAATAGAAGGAATTTCTCAAGGATTACTCTATCTTCACAAGTACTCGAGACTCAAAGTCATTCACAGAGACTTAAAAGCTAGTAACATACTTCTTGATGAGAATATGAATCCAAAAATTTCTGATTTTGGATTGGCAAGAATGTTTGAGGAACAAGAATCTACAACAACTACGAGTAGGATCATTGGGACATATGGTTATATGTCTCCTGAGTATGCTATGGAAGGAATTGTTTCTGTAAAGTCTGATGTTTATAGCTTTGGAGTGTTGGTCCTTGAAATTATTAGTGGGAGAAGAAATACTAGCTTCAATGACGACCGCCCGATGAATTTGATAGGACATGCATGGGAGTTATGGAATCAAGGTGTGCCTCTACAATTAATGGATCCATCGCTTAATGATTTGTTTGATCTCAATGAAGTGACAAGATGCATTCACATTGGTCTCATATGCGTAGAAAAATATGCAAATGATCGACCCACAATGTCTCAAATAATTTCAATGTTAACAAATGAAAGTGTAGTAGTTCCCTTGCCTCGAAAACCAGCATTCTATGTGGAAAGAGAAATTTTACTCAGAAAAGCATCTTCCAAAGAGTTATGTACAAACTCTACTGATGAAATTACTATTACCTAGCTTGTAAATATAATGCCTGCGGCATAATATTCCTATATATTTTTGTTTTTATAAAAAAAATTCATTTTAGAATGATTTCCTTTAAATAGATTCCTTTACTTATATATATAATTAGGATAACGAAACAACATTTTTTTTAATTACTAAGCATTAGATGT
Coding sequences of Glyma08g13260
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma08g13260.2 sequence type=CDS gene model=Glyma08g13260 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGTGATCTGTTATAAACAGCTGGGAGAATATCATTTCTTTCTTGTTTTGCTTCTCATTTCAGTCCAATGCGTTATTGCCGCAAATAACATTTTGAAGCCCGGAGATACACTGAATACGAGAAGCCAGCTATGTTCAGAAAACAACATATACTGCATGGATTTTTCCCCATTAAACACAAATCCTATTGTAAACTACACTCACTTAAGCATCAGTGACAACAGAAAGGACGATAATTCCGCAGTGTGGGTTGCTAATAGAAATCAACCCGTTGACAAGCATTCTGCAGTTCTGATGCTAAACCACTCTGGTGTACTCAAAATTGAATCATCCAAAGATGCCAAACCCATCATCCTTTTTTCTTCACCTCAACCACTGAACAACAACAACACCGAAGCCAAGCTGTTGGATACAGGTAACTTTGTGGTGCAACAACTTCACCCCAATGGAACAAACACTGTGTTGTGGCAAAGTTTTGATTACCCTACTGATACTCTTCTCCCTGGGATGAAGTTAGGAGTTAATCACAAAACTGGTCATAACTGGTCACTTGTTTCGTGGTTGGCTGTATCCGACCCCAGAATCGGGGCATTCAGGTTCGAGTGGGAACCCATAAGAAGAGAATTGATCATCAAGGAACGAGGAAGATTGTCCTGGACAAGTGGAGAACTCAGAAACAACAATGGATCCATTCACAACACCAAGTACACGATTGTCTCAAACGACGACGAAAGCTACTTCACAATTACAACAACAAGTTCAAATGAACAAGAGCTTATAATGTGGGAAGTATTGGAAACTGGGCGGTTGATAGATAGGAATAAAGAAGCTATTGCAAGGGCTGATATGTGTTATGGTTACAACACAGATGGAGGGTGCCAAAAGTGGGAGGAGATACCCACATGTAGGCATAGCGGTGATGCATTTGAAACCAGGGAAGTTTACGTCAGTATGAACATGCTAAACAATCTAGGTAATTCGAGTTATGGCCCAAGTGATTGCCGGGATATTTGCTGGGAAAATTGTGCTTGTAATGGATACAGAAATTACTATGATGGTGGAACTGGTTGTACTTTCTTGCATTGGAATTCAACCGAAGAAGCTAATTTTGCAAGTGGGGGCGAAACGTTTCATATATTGGTCAACAACACCCACCACAAAGGTACAAAAAAGTGGATATGGATAACTGTAGCAGTAGTTGTTCCATTTGTGATATGTGCTTTCATTCTATTTCTGGCCTTGAAGAAAAGAAAACATCTGTTTGAAGAGAAGAAAAGAAATAGAATGGAGACTGGGATGTTGGATTCGGCAATTAAAGATCTTGAAGATGAGTTCAAGAAGAGACAAAATCTAAAAGTATTTAAGTATACTTCAGTACTGTCGGCAACCAATGATTTTTCACCAGAAAACAAGTTAGGACAAGGAGGCTTTGGACCAGTTTATAAGGGAATCCTACCAACTGGGCAAGAAGCTGCTATTAAAAGACTTTCAAAAACATCTAGACAAGGGGTTGTGGAATTCAAAAATGAGCTAATGCTCATATGTGAACTTCAACACATGAATCTTGTACAACTACTTGGATGCTGCATTCATGAAGAAGAGAGGATTCTAATTTATGAGTATATGCCAAACAAAAGCTTGGATTTCTATCTATTCGATTGCACTCGAAGCAAGTTACTAGATTGGAAGAAGCGTTTCAACATAATAGAAGGAATTTCTCAAGGATTACTCTATCTTCACAAGTACTCGAGACTCAAAGTCATTCACAGAGACTTAAAAGCTAGTAACATACTTCTTGATGAGAATATGAATCCAAAAATTTCTGATTTTGGATTGGCAAGAATGTTTGAGGAACAAGAATCTACAACAACTACGAGTAGGATCATTGGGACATATGGTTATATGTCTCCTGAGTATGCTATGGAAGGAATTGTTTCTGTAAAGTCTGATGTTTATAGCTTTGGAGTGTTGGTCCTTGAAATTATTAGTGGGAGAAGAAATACTAGCTTCAATGACGACCGCCCGATGAATTTGATAGGACATGCATGGGAGTTATGGAATCAAGGTGTGCCTCTACAATTAATGGATCCATCGCTTAATGATTTGTTTGATCTCAATGAAGTGACAAGATGCATTCACATTGGTCTCATATGCGTAGAAAAATATGCAAATGATCGACCCACAATGTCTCAAATAATTTCAATGTTAACAAATGAAAGTGTAGTAGTTCCCTTGCCTCGAAAACCAGCATTCTATGTGGAAAGAGAAATTTTACTCAGAAAAGCATCTTCCAAAGAGTTATGTACAAACTCTACTGATGAAATTACTATTACCTAG
>Glyma08g13260.3 sequence type=CDS gene model=Glyma08g13260 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGTGATCTGTTATAAACAGCTGGGAGAATATCATTTCTTTCTTGTTTTGCTTCTCATTTCAGTCCAATGCGTTATTGCCGCAAATAACATTTTGAAGCCCGGAGATACACTGAATACGAGAAGCCAGCTATGTTCAGAAAACAACATATACTGCATGGATTTTTCCCCATTAAACACAAATCCTATTGTAAACTACACTCACTTAAGCATCAGTGACAACAGAAAGGACGATAATTCCGCAGTGTGGGTTGCTAATAGAAATCAACCCGTTGACAAGCATTCTGCAGTTCTGATGCTAAACCACTCTGGTGTACTCAAAATTGAATCATCCAAAGATGCCAAACCCATCATCCTTTTTTCTTCACCTCAACCACTGAACAACAACAACACCGAAGCCAAGCTGTTGGATACAGGTAACTTTGTGGTGCAACAACTTCACCCCAATGGAACAAACACTGTGTTGTGGCAAAGTTTTGATTACCCTACTGATACTCTTCTCCCTGGGATGAAGTTAGGAGTTAATCACAAAACTGGTCATAACTGGTCACTTGTTTCGTGGTTGGCTGTATCCGACCCCAGAATCGGGGCATTCAGGTTCGAGTGGGAACCCATAAGAAGAGAATTGATCATCAAGGAACGAGGAAGATTGTCCTGGACAAGTGGAGAACTCAGAAACAACAATGGATCCATTCACAACACCAAGTACACGATTGTCTCAAACGACGACGAAAGCTACTTCACAATTACAACAACAAGTTCAAATGAACAAGAGCTTATAATGTGGGAAGTATTGGAAACTGGGCGGTTGATAGATAGGAATAAAGAAGCTATTGCAAGGGCTGATATGTGTTATGGTTACAACACAGATGGAGGGTGCCAAAAGTGGGAGGAGATACCCACATGTAGGCATAGCGGTGATGCATTTGAAACCAGGGAAGTTTACGTCAGTATGAACATGCTAAACAATCTAGGTAATTCGAGTTATGGCCCAAGTGATTGCCGGGATATTTGCTGGGAAAATTGTGCTTGTAATGGATACAGAAATTACTATGATGGTGGAACTGGTTGTACTTTCTTGCATTGGAATTCAACCGAAGAAGCTAATTTTGCAAGTGGGGGCGAAACGTTTCATATATTGGTCAACAACACCCACCACAAAGGTACAAAAAAGTGGATATGGATAACTGTAGCAGTAGTTGTTCCATTTGTGATATGTGCTTTCATTCTATTTCTGGCCTTGAAGAAAAGAAAACATCTGTTTGAAGAGAAGAAAAGAAATAGAATGGAGACTGGGATGTTGGATTCGGCAATTAAAGATCTTGAAGATGAGTTCAAGAAGAGACAAAATCTAAAAGTATTTAAGTATACTTCAGTACTGTCGGCAACCAATGATTTTTCACCAGAAAACAAGTTAGGACAAGGAGGCTTTGGACCAGTTTATAAGGGAATCCTACCAACTGGGCAAGAAGCTGCTATTAAAAGACTTTCAAAAACATCTAGACAAGGGGTTGTGGAATTCAAAAATGAGCTAATGCTCATATGTGAACTTCAACACATGAATCTTGTACAACTACTTGGATGCTGCATTCATGAAGAAGAGAGGATTCTAATTTATGAGTATATGCCAAACAAAAGCTTGGATTTCTATCTATTCGGTATGGAATATGGTGCAGTCTATTTAATTAGGATATGCTTTAAATTGGAAAAGGCAAATTAA
Predicted protein sequences of Glyma08g13260
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma08g13260.2 sequence type=predicted peptide gene model=Glyma08g13260 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MVICYKQLGEYHFFLVLLLISVQCVIAANNILKPGDTLNTRSQLCSENNIYCMDFSPLNTNPIVNYTHLSISDNRKDDNSAVWVANRNQPVDKHSAVLMLNHSGVLKIESSKDAKPIILFSSPQPLNNNNTEAKLLDTGNFVVQQLHPNGTNTVLWQSFDYPTDTLLPGMKLGVNHKTGHNWSLVSWLAVSDPRIGAFRFEWEPIRRELIIKERGRLSWTSGELRNNNGSIHNTKYTIVSNDDESYFTITTTSSNEQELIMWEVLETGRLIDRNKEAIARADMCYGYNTDGGCQKWEEIPTCRHSGDAFETREVYVSMNMLNNLGNSSYGPSDCRDICWENCACNGYRNYYDGGTGCTFLHWNSTEEANFASGGETFHILVNNTHHKGTKKWIWITVAVVVPFVICAFILFLALKKRKHLFEEKKRNRMETGMLDSAIKDLEDEFKKRQNLKVFKYTSVLSATNDFSPENKLGQGGFGPVYKGILPTGQEAAIKRLSKTSRQGVVEFKNELMLICELQHMNLVQLLGCCIHEEERILIYEYMPNKSLDFYLFDCTRSKLLDWKKRFNIIEGISQGLLYLHKYSRLKVIHRDLKASNILLDENMNPKISDFGLARMFEEQESTTTTSRIIGTYGYMSPEYAMEGIVSVKSDVYSFGVLVLEIISGRRNTSFNDDRPMNLIGHAWELWNQGVPLQLMDPSLNDLFDLNEVTRCIHIGLICVEKYANDRPTMSQIISMLTNESVVVPLPRKPAFYVEREILLRKASSKELCTNSTDEITIT*
>Glyma08g13260.3 sequence type=predicted peptide gene model=Glyma08g13260 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MVICYKQLGEYHFFLVLLLISVQCVIAANNILKPGDTLNTRSQLCSENNIYCMDFSPLNTNPIVNYTHLSISDNRKDDNSAVWVANRNQPVDKHSAVLMLNHSGVLKIESSKDAKPIILFSSPQPLNNNNTEAKLLDTGNFVVQQLHPNGTNTVLWQSFDYPTDTLLPGMKLGVNHKTGHNWSLVSWLAVSDPRIGAFRFEWEPIRRELIIKERGRLSWTSGELRNNNGSIHNTKYTIVSNDDESYFTITTTSSNEQELIMWEVLETGRLIDRNKEAIARADMCYGYNTDGGCQKWEEIPTCRHSGDAFETREVYVSMNMLNNLGNSSYGPSDCRDICWENCACNGYRNYYDGGTGCTFLHWNSTEEANFASGGETFHILVNNTHHKGTKKWIWITVAVVVPFVICAFILFLALKKRKHLFEEKKRNRMETGMLDSAIKDLEDEFKKRQNLKVFKYTSVLSATNDFSPENKLGQGGFGPVYKGILPTGQEAAIKRLSKTSRQGVVEFKNELMLICELQHMNLVQLLGCCIHEEERILIYEYMPNKSLDFYLFGMEYGAVYLIRICFKLEKAN*