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Report for Sequence Feature Glyma08g11660

Feature Type:gene_model
Chromosome:Gm08
Start:8492579
stop:8493698
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma08g11660
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G59810AT Annotation by Michelle Graham. TAIR10: Subtilase family protein | chr5:24096895-24100387 REVERSE LENGTH=778 SoyBaseE_val: 5.00E-52ISS
GO:0006508GO-bp Annotation by Michelle Graham. GO Biological Process: proteolysis SoyBaseN/AISS
GO:0008152GO-bp Annotation by Michelle Graham. GO Biological Process: metabolic process SoyBaseN/AISS
GO:0043086GO-bp Annotation by Michelle Graham. GO Biological Process: negative regulation of catalytic activity SoyBaseN/AISS
GO:0005618GO-cc Annotation by Michelle Graham. GO Cellular Compartment: cell wall SoyBaseN/AISS
GO:0004252GO-mf Annotation by Michelle Graham. GO Molecular Function: serine-type endopeptidase activity SoyBaseN/AISS
GO:0042802GO-mf Annotation by Michelle Graham. GO Molecular Function: identical protein binding SoyBaseN/AISS
UniRef100_Q6WNU4UniRef Annotation by Michelle Graham. Best UniRef hit: Subtilisin-like protease n=2 Tax=Glycine max RepID=Q6WNU4_SOYBN SoyBaseE_val: 4.00E-99ISS
UniRef100_Q6WNU4UniRef Annotation by Michelle Graham. Most informative UniRef hit: Subtilisin-like protease n=2 Tax=Glycine max RepID=Q6WNU4_SOYBN SoyBaseE_val: 4.00E-99ISS

Expression Patterns of Glyma08g11660
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma08g11660 not represented in the dataset
Glyma08g11660 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma08g11660 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments

References for Glyma08g11660
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma08g11660
>Glyma08g11660.1   sequence type=CDS   gene model=Glyma08g11660   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
TTGTGTTGTGGTTACGAAAATTGTGAAAAAAATATTGGACAAATGTACGAAATTGTATTCCAAATACAGATGTGGCCAGGGGAAAGCTTATCAGCTACAAAATTGGCACACAAGTTCTATCCAATTATTAAAGCCACAGATGCTAAATTGGCGAGTGCAAGAGCTGAAGACGCGGTGCTGTGCCAGAATGGGACCCTGGATCCCAACAAGGCGAAGGGAAAGATCTGGACAAGGGAGAGCAAAGCTTTTCTAGCTGGTGCTGTGGGAATGGTCCTTGCTAATGACAAGACTACTGGGAATGAAATTATAGCGGATCCTCATGTCCTTCCTGCTTCTCATATCAATTTTACTGATGGTAGTGCTGTCTTTAATTACATCAACTCAACCAAGTTCCCAGTGGCATATATTACACATCCAAAGACTCAATTGGATACTAAGCCAGCCCCATTTATGGCAGCATTTTCATCAAAAGGACCAAATACTATGGTGCCAGAGATCCTAAAGCCTGATATCACTGCACCAGGCGTGTCAGTTATAGCAGCCTATACTGAGGCTCAAGGACCAACCAATCAA
Predicted protein sequences of Glyma08g11660
>Glyma08g11660.1   sequence type=predicted peptide   gene model=Glyma08g11660   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
LCCGYENCEKNIGQMYEIVFQIQMWPGESLSATKLAHKFYPIIKATDAKLASARAEDAVLCQNGTLDPNKAKGKIWTRESKAFLAGAVGMVLANDKTTGNEIIADPHVLPASHINFTDGSAVFNYINSTKFPVAYITHPKTQLDTKPAPFMAAFSSKGPNTMVPEILKPDITAPGVSVIAAYTEAQGPTNQ






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