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Report for Sequence Feature Glyma08g11181

Feature Type:gene_model
Chromosome:Gm08
Start:8189706
stop:8192940
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma08g11181
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G34880AT Annotation by Michelle Graham. TAIR10: Amidase family protein | chr4:16615549-16617424 FORWARD LENGTH=466 SoyBaseE_val: 6.00E-28ISS
GO:0019256GO-bp Annotation by Michelle Graham. GO Biological Process: acrylonitrile catabolic process SoyBaseN/AISS
GO:0019330GO-bp Annotation by Michelle Graham. GO Biological Process: aldoxime metabolic process SoyBaseN/AISS
GO:0004040GO-mf Annotation by Michelle Graham. GO Molecular Function: amidase activity SoyBaseN/AISS
GO:0016884GO-mf Annotation by Michelle Graham. GO Molecular Function: carbon-nitrogen ligase activity, with glutamine as amido-N-donor SoyBaseN/AISS
PTHR11895Panther AMIDASE JGI ISS
PTHR11895:SF8Panther GLUTAMYL-TRNA(GLN) AMIDOTRANSFERASE, SUBUNITA JGI ISS
UniRef100_G7LHB5UniRef Annotation by Michelle Graham. Most informative UniRef hit: Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Medicago truncatula RepID=G7LHB5_MEDTR SoyBaseE_val: 8.00E-38ISS
UniRef100_UPI0002337FB2UniRef Annotation by Michelle Graham. Best UniRef hit: UPI0002337FB2 related cluster n=1 Tax=unknown RepID=UPI0002337FB2 SoyBaseE_val: 1.00E-55ISS

Expression Patterns of Glyma08g11181
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma08g11181 not represented in the dataset
Glyma08g11181 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma08g11181 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.08g106100 Wm82.a2.v1IGC As supplied by JGI

References for Glyma08g11181
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma08g11181
>Glyma08g11181.1   sequence type=CDS   gene model=Glyma08g11181   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGCAAGATTGTCACATATTGGATTTGAGAAATTAATGATAACAAATAACCTTGACGCAATGGTGGTACCTTTTTCATTCTTTGCTAGTATACTTGCAAGGGGAGGTTATCCTGGAGTAACTGTTCCAGCGGGATATGAAAAGGGTGCACCATTTGGAATTATCTTTGGAGGTTTGAAAGGCTCGGAACCAAAGCTCATCCAAATTGCTTATTCCTTTGAGCAAGCAACTTTGATCAGGAAGCCCCCACCACTCCGAAAGTTGGAGGTTTAA
Predicted protein sequences of Glyma08g11181
>Glyma08g11181.1   sequence type=predicted peptide   gene model=Glyma08g11181   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MARLSHIGFEKLMITNNLDAMVVPFSFFASILARGGYPGVTVPAGYEKGAPFGIIFGGLKGSEPKLIQIAYSFEQATLIRKPPPLRKLEV*






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