Report for Sequence Feature Glyma08g10871
Feature Type: gene_model
Chromosome: Gm08
Start: 7911831
stop: 7925767
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma08g10871
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT1G67490 AT
Annotation by Michelle Graham. TAIR10: glucosidase 1 | chr1:25280633-25286581 REVERSE LENGTH=852
SoyBase E_val: 0 ISS
GO:0009311 GO-bp
Annotation by Michelle Graham. GO Biological Process: oligosaccharide metabolic process
SoyBase N/A ISS
GO:0009913 GO-bp
Annotation by Michelle Graham. GO Biological Process: epidermal cell differentiation
SoyBase N/A ISS
GO:0010053 GO-bp
Annotation by Michelle Graham. GO Biological Process: root epidermal cell differentiation
SoyBase N/A ISS
GO:0005783 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: endoplasmic reticulum
SoyBase N/A ISS
GO:0003824 GO-mf
Annotation by Michelle Graham. GO Molecular Function: catalytic activity
SoyBase N/A ISS
GO:0004558 GO-mf
Annotation by Michelle Graham. GO Molecular Function: alpha-glucosidase activity
SoyBase N/A ISS
GO:0004573 GO-mf
Annotation by Michelle Graham. GO Molecular Function: mannosyl-oligosaccharide glucosidase activity
SoyBase N/A ISS
KOG2161
KOG
Glucosidase I
JGI ISS
PTHR10412 Panther
MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE
JGI ISS
PTHR10412:SF1 Panther
MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE-RELATED
JGI ISS
PF03200 PFAM
Mannosyl oligosaccharide glucosidase
JGI ISS
UniRef100_B9RMG4 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Mannosyl-oligosaccharide glucosidase, putative n=1 Tax=Ricinus communis RepID=B9RMG4_RICCO
SoyBase E_val: 0 ISS
UniRef100_I1K3K8 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1K3K8_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma08g10871
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma08g10871
Paralog Evidence Comments
Glyma05g27900 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma08g10871 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.08g103200 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma08g10871
Coding sequences of Glyma08g10871
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma08g10871.1 sequence type=CDS gene model=Glyma08g10871 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGACCGGAAGCGGAAGAAGTAGCGTTCGGAGCAGGGCGAGATCCCTCTCCGACTCCGACGCCGACGCCGATTCTCTTCGACAAAAGAGGCCTCCGCTGAATCGCCATAGAGAGAGAAGCAAATACGGAAGCTACATTCCGATATACAGCAATGCCAATCTCAAAGTGCTGCTCGGTATCTGCTTCGTCGCATTCTTCATCATCTGGTTTATGATTCACCACCTCTCCAATTCCGTAACGGAGCCGAAGCTTCCTCGCGCCGTTACGCCATTTCCCGCGCCAAAGATAATGGACCTTCCTCAGTTTGAAGGTGAGCACAAGGAGAGTTTGTATTGGGGAACTTATCGTCCTCACGTGTATCTCGGAATTCGCGCCAGGACTCCAAAATCTTTGATGGCTGGATTAATGTGGATTGGTGTGAAGGATGGAAAATATCACTTGCGGCATGTTTGCAGACACGAGGATGACCTAAGTACTTATGGTTGGACAAGGCACAATGGACGTGATTTTGGACATCAAGTGCTGGTTGATCATGGCATGACCTTGACTACTGAATTTTTAAAATCAAAAGAGGAAGGCAGTGGCTATGGTGGGGATTGGGCAGTTCGAATTAATATGCAAATTGATAAGTCCAAGTGGAATGAGGGATTTGGGAGAGGTGCCCAGCTCTTTTTCTATTTGGCTGATGAAGCTGGTAATGCTCTAGATGTAAGTAGAGAAAACTTGAACATTCATGAAGATTCTTTGCTTGCATCTGGCTCTCGAGCAGATATTGGAGATTGGCAGCTACATTTGAAATCAACGGATGATTTGCAGCTGCATTATGCTGGATTTCGCATACCTCACTTGCACAATTTATCTGATCCCGTAGAGGAAAATCTTGCATCACAAATACAAAAGCATGCTCGACTGCAGCTATCTGACTCATTAGATGATTCTCCAAATGTGTTAGTTTTTCAGATTATTGGTGGATTTCCTTTCACAACAGATATTGTACTAATCTCTGGAACTGATTTGGAAACTTCTAGAGAAGAAGAGCGTGTCAGTATGCTTACAGGTACCTCACTGTCCAATAAACTGAAATATAAAGAACAAGAATTTGATGAGAAGTTTGAGAAGATTTTTAATTTGACCGAGAAGGTGGATTCCGAAGCCTTATCTGTTGGTAAGGCTGCTGTTGGAAACTTATTAGGTGGCATCGGCTACTTCTATGGCCACTCTTTGTACAAATTCACAATTCGCCAATATTATCAAAGCTTATACCACTTAACTGCTGGACATGTGACTCACAATAGGAGAGAGATTTTAATCATGTGTGTGAACCTGCAACTTATCATTTATAGTAATGGGCAAAACCCTAAATTGGTCCTCCAAAGACTTAGAGAACATGTCAATTATATGTCGTATTGGTCTGCTGAGCTTTACACAGCTGTACCAAGTCGATCTTTCTTTCCAAGAGGATTTTTATGGGATGAAGGTTTTCATCAACTTATAATCTGGCGTTGGGATATTCATATTTCGTTGGATATCATTGGACATTGGTTAGATTTGATTAATGTTGATGGATGGATACCACGTGAACAGATTTTAGGGGCTGAAGCACTAAGTCGGGTCCCAGAGGAATTTGTTCCTCAGCATCCAACAAATGGAAATCCTCCAACTCTGTTTTTAGCATTAAATGATATAATTGATGGCTTGAAGAATAATGAGTTTACTGCAATGGATAGAAGTGAGATCTCTCTATTCCTGGAACGTGCCTTTGTTCGATTGGAAGCATGGTTCCATTGGTTCAAACTTGAAATGAAGACACTGTCATCTGGACTGGATGATTATCCACGAGCTTCACACCCAAGTGAAGATGAACACCACTTGGATCTTAGATGTTGGATGTTACTTGCAGCAGACTGTATGCATTCCATTCAAGAGTTGTTGGATATGGAAAGCAAGCCTGGCATGGATTATGGTTCTACTGCTAAGTTGCTATTGGATTTTGAGTTACTGAACCAGATGCATTTTGATGATGGATACGGAGCTTACTTTGATTTTGGAAATCATACAGAGAAGGTTCAACTTAAATGGAAAGAACTGCAGGCTGGACAAAATTATGCTACTCACCAACTTCTCCGGGATGTTATGGATATGCCTGTATTGAGATTGGTTCCTCACATTGGTTACGTTAGTTTATTCCCATTCATGGGGAGGATCATTCCATCTGGATCATGGATTCTGGAAAAGCAGCTTGAACTCATTTCAAATCGCAGCCTCTTATGGACCAACTATGGATTACGTTCACTTGGCAAAACAAGTTCCTTGTACATGAAGCACAACACAGAGCATGACCCTCCATACTGGAGAGGTCCTGTTTGGATAAACATGAATTACAGAATTCCTTCCGCACTCCACCATTACTCCAAAGAGAATGGGCCATATCAGGAGAAAGCTAAAGCCATCTACAAAGAATTGAGAAGCAATTTAATTAGAAATATAGTGCGCAATTATCGACAGACGGGATTTTTGTGGGAACAGTACGAACAGACTAAGGGTAAGGGAAAAGGGGCACATCCATTTACTGGCTGGACATCGCTTGTAGTATTAATCATGGCAGAAGCATATGGAACTATTTAG
Predicted protein sequences of Glyma08g10871
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma08g10871.1 sequence type=predicted peptide gene model=Glyma08g10871 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MTGSGRSSVRSRARSLSDSDADADSLRQKRPPLNRHRERSKYGSYIPIYSNANLKVLLGICFVAFFIIWFMIHHLSNSVTEPKLPRAVTPFPAPKIMDLPQFEGEHKESLYWGTYRPHVYLGIRARTPKSLMAGLMWIGVKDGKYHLRHVCRHEDDLSTYGWTRHNGRDFGHQVLVDHGMTLTTEFLKSKEEGSGYGGDWAVRINMQIDKSKWNEGFGRGAQLFFYLADEAGNALDVSRENLNIHEDSLLASGSRADIGDWQLHLKSTDDLQLHYAGFRIPHLHNLSDPVEENLASQIQKHARLQLSDSLDDSPNVLVFQIIGGFPFTTDIVLISGTDLETSREEERVSMLTGTSLSNKLKYKEQEFDEKFEKIFNLTEKVDSEALSVGKAAVGNLLGGIGYFYGHSLYKFTIRQYYQSLYHLTAGHVTHNRREILIMCVNLQLIIYSNGQNPKLVLQRLREHVNYMSYWSAELYTAVPSRSFFPRGFLWDEGFHQLIIWRWDIHISLDIIGHWLDLINVDGWIPREQILGAEALSRVPEEFVPQHPTNGNPPTLFLALNDIIDGLKNNEFTAMDRSEISLFLERAFVRLEAWFHWFKLEMKTLSSGLDDYPRASHPSEDEHHLDLRCWMLLAADCMHSIQELLDMESKPGMDYGSTAKLLLDFELLNQMHFDDGYGAYFDFGNHTEKVQLKWKELQAGQNYATHQLLRDVMDMPVLRLVPHIGYVSLFPFMGRIIPSGSWILEKQLELISNRSLLWTNYGLRSLGKTSSLYMKHNTEHDPPYWRGPVWINMNYRIPSALHHYSKENGPYQEKAKAIYKELRSNLIRNIVRNYRQTGFLWEQYEQTKGKGKGAHPFTGWTSLVVLIMAEAYGTI*