Report for Sequence Feature Glyma08g10750
Feature Type: gene_model
Chromosome: Gm08
Start: 7822406
stop: 7824861
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma08g10750
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT2G04620 AT
Annotation by Michelle Graham. TAIR10: Cation efflux family protein | chr2:1610506-1612902 REVERSE LENGTH=798
SoyBase E_val: 0 ISS
GO:0006812 GO-bp
Annotation by Michelle Graham. GO Biological Process: cation transport
SoyBase N/A ISS
GO:0055085 GO-bp
Annotation by Michelle Graham. GO Biological Process: transmembrane transport
SoyBase N/A ISS
GO:0016020 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: membrane
SoyBase N/A ISS
GO:0016021 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: integral to membrane
SoyBase N/A ISS
GO:0008324 GO-mf
Annotation by Michelle Graham. GO Molecular Function: cation transmembrane transporter activity
SoyBase N/A ISS
GO:0015562 GO-mf
Annotation by Michelle Graham. GO Molecular Function: efflux transmembrane transporter activity
SoyBase N/A ISS
KOG1484
KOG
Putative Zn2+ transporter MSC2 (cation diffusion facilitator superfamily)
JGI ISS
PTHR11562 Panther
CATION EFFLUX PROTEIN/ ZINC TRANSPORTER
JGI ISS
PF01545 PFAM
Cation efflux family
JGI ISS
UniRef100_B9MXD1 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Metal tolerance protein n=1 Tax=Populus trichocarpa RepID=B9MXD1_POPTR
SoyBase E_val: 0 ISS
UniRef100_I1KRZ1 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1KRZ1_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma08g10750
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Gene model name correspondences to Glyma08g10750 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.08g102000 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma08g10750
Coding sequences of Glyma08g10750
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma08g10750.1 sequence type=CDS gene model=Glyma08g10750 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGCCGATAACGATCACTCCCACTCCCACCCTCACCACCACCACCACCACCACCGTCCTCATCGCCTCTCAGTGCCGCCGCGCAGCACCACATTCGGCGGCACTCCGGGAACCCAGCCCGCCTTCTGGTACTCCTCAAGCACAACCCCAACCCCAACCCCCTCCAAAACCCGCCGTTCATTGTCCTTCCCGAAATCGAAATCGAAATCGAGATCCTCAGTCTTCCTCCTCCTCTTCTTCTCCCTCCGCTCCCTCTACTCCCTCCTTCCCTTCCTCCGCTCCTCTCCTTCCTTCTCCCTCTTCCCCTTCTCCTTCCTCGTCTCCCTCCTCTCCTTCTCCCTCACCCTCTCCTTCTCCCTCTTCTCTTCTTCCTCCACCTCCTCCAAAGACCCCTTTCTCCACCACAAACCCAAACACCCTCTTCTCTCACCTTCCCTCACACCCTCCCAGCAGAGAATCTTGGTCACCAAATCAATCCTCCTTGCCCTCGTCTTCCTCCTCCGCTTCCAGGCCCTCCGCTACTGCGGCACCGCCTCCATGATCCTCGCCGAGTTAATGGGCTCCATCGCTGCCCGGCCCAGAAACCCTTACAGGCACAACCTCCGCGGCTTCCTCTCCCTCTCCCTCGGCCTCCTCCTGCTCTCCTTCGGCTGGGACCGGATCGAATGCTTCCCGTTCTCTCCCGCTTGCCTCACCCGCCGGATTTGGCCCTTGATCCTCCCTTTCGCCTCCGGCTTTCTCGCCCACTACCGGCTCGTGGACTCCGGGACTACTCTCAAACAGCTCGGCCGCAAACGGGTTCGGTTAATTACTCTCCTTTTCACTACTGTTATTCTATTTGTTCCCGCAGTTGTTAGTTTCTTCGTGTTTGAGGCAGAAGAAGATAGTGTTGCCTTTGGGAATTTGGCGTGGCCATTGGTGAATACTGTTGTTTTCGGTGTGCTTTTGAGTGAGAGTTATAGTGGTGATGATAATGATGATGATGATAGTTTCGCGAGTTCGAGGGAGTTTCTGGTTACTTTTGTTTGCACTTTGGTGTTGGAGCTTTTTTATTTCCCTGAACTTTCCCTCTGGGGTTTGTTGCTTTGTGGTTTGTTGCTATATGTTGGTGTTAGAGACTTGGATCCTTTTCATTCTTCCAATGAAGGGGAGTTCTCGGGTGACATGATTATGAAGCCTATCAGACATGTTTTGAGCGAGAGGAAGTCGCGGAAGATTGCGCTTTTTCTTCTAATCAATGCTGGGTATATGGTTGTGGAGTTTGCTGCTGGGTTCATGAGCAATAGTCTTGGCCTGATATCGGATGCGTGCCACATGTTGTTTGATTGTGCTGCTTTGGCCATTGGGTTGTATGCATCGTATATATCTCGTTTGCCGGCAAATAATCACTATAACTATGGTAGAGGAAGATTTGAGGTTTTATCAGGGTATACTAATGCTGTGTTTCTGGTTCTTGTGGGAGCACTCATAGTGGTGGAGTCCTTTGAGAGGATATTGGATCCTCAGGAGATATCAACTAATAGCTTGTTGGTTGTCTCCATAGGAGGGCTTGTGGTCAATGTCATTGGCTTGATATTCTTTCATGAGGAGCATCATCATGCTCATGGCCATGTATTATCTGGATCATCATGCTCCCATTCGCACACACACACGGAGTCGCATAGTCACCACACCCACCATCATCATGATCATGATCATGATCATGATCATCTGCATAGCCATGGTCACGAAACAACAATCCATGGAAGCAATCAAGAATATATATCAGTTTCAAGTGATTGCCGAGACGATTCATGCCCTGGTGATCATGGCCATCATCATAATCATAACCACTGTAGTCATGAGAGGAAGCATCATGAGCATGACCATCGCCATATTGATCACAATATGGAAGGGATATTTTTGCATGTTCTTGCTGACACCATGGGGAGTGTTGGTGTTGTTATATCTACCCTGTTGATTAAGTACAAGGGATGGCTTATTGCTGATCCTGCCTGCTCAATTTTTATTTCTATTTTAATTGTATCTTCTGTGATACCTTTGCTAAAAAATTCAGCAGAACATGAGCTGAAGGATGCCTTAATTAATGTTTCGAAGATAAGGGGTGTTTATGGCATTCAAAAGTTTCATTCCTGGAACTTCACAAACACAGATGTAGTTGGTACGATGCATCTTCACGTGTCAACAGATACAGACAAGACATCCGCCAAGTCGCAGGTTTTGCATCTGTTACGTAATGCTGGAATCAAGGATGTAACCTTGCAGGTGGAATGTGTTGGATAA
Predicted protein sequences of Glyma08g10750
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma08g10750.1 sequence type=predicted peptide gene model=Glyma08g10750 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MADNDHSHSHPHHHHHHHRPHRLSVPPRSTTFGGTPGTQPAFWYSSSTTPTPTPSKTRRSLSFPKSKSKSRSSVFLLLFFSLRSLYSLLPFLRSSPSFSLFPFSFLVSLLSFSLTLSFSLFSSSSTSSKDPFLHHKPKHPLLSPSLTPSQQRILVTKSILLALVFLLRFQALRYCGTASMILAELMGSIAARPRNPYRHNLRGFLSLSLGLLLLSFGWDRIECFPFSPACLTRRIWPLILPFASGFLAHYRLVDSGTTLKQLGRKRVRLITLLFTTVILFVPAVVSFFVFEAEEDSVAFGNLAWPLVNTVVFGVLLSESYSGDDNDDDDSFASSREFLVTFVCTLVLELFYFPELSLWGLLLCGLLLYVGVRDLDPFHSSNEGEFSGDMIMKPIRHVLSERKSRKIALFLLINAGYMVVEFAAGFMSNSLGLISDACHMLFDCAALAIGLYASYISRLPANNHYNYGRGRFEVLSGYTNAVFLVLVGALIVVESFERILDPQEISTNSLLVVSIGGLVVNVIGLIFFHEEHHHAHGHVLSGSSCSHSHTHTESHSHHTHHHHDHDHDHDHLHSHGHETTIHGSNQEYISVSSDCRDDSCPGDHGHHHNHNHCSHERKHHEHDHRHIDHNMEGIFLHVLADTMGSVGVVISTLLIKYKGWLIADPACSIFISILIVSSVIPLLKNSAEHELKDALINVSKIRGVYGIQKFHSWNFTNTDVVGTMHLHVSTDTDKTSAKSQVLHLLRNAGIKDVTLQVECVG*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
