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Report for Sequence Feature Glyma08g09730

Feature Type:gene_model
Chromosome:Gm08
Start:6937333
stop:6950346
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma08g09730
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G01980AT Annotation by Michelle Graham. TAIR10: sodium proton exchanger, putative (NHX7) (SOS1) | chr2:457070-463145 FORWARD LENGTH=1146 SoyBaseE_val: 0ISS
GO:0000302GO-bp Annotation by Michelle Graham. GO Biological Process: response to reactive oxygen species SoyBaseN/AISS
GO:0006812GO-bp Annotation by Michelle Graham. GO Biological Process: cation transport SoyBaseN/AISS
GO:0006814GO-bp Annotation by Michelle Graham. GO Biological Process: sodium ion transport SoyBaseN/AISS
GO:0006816GO-bp Annotation by Michelle Graham. GO Biological Process: calcium ion transport SoyBaseN/AISS
GO:0006869GO-bp Annotation by Michelle Graham. GO Biological Process: lipid transport SoyBaseN/AISS
GO:0006891GO-bp Annotation by Michelle Graham. GO Biological Process: intra-Golgi vesicle-mediated transport SoyBaseN/AISS
GO:0006979GO-bp Annotation by Michelle Graham. GO Biological Process: response to oxidative stress SoyBaseN/AISS
GO:0009651GO-bp Annotation by Michelle Graham. GO Biological Process: response to salt stress SoyBaseN/AISS
GO:0010351GO-bp Annotation by Michelle Graham. GO Biological Process: lithium ion transport SoyBaseN/AISS
GO:0016558GO-bp Annotation by Michelle Graham. GO Biological Process: protein import into peroxisome matrix SoyBaseN/AISS
GO:0035725GO-bp Annotation by Michelle Graham. GO Biological Process: sodium ion transmembrane transport SoyBaseN/AISS
GO:0042542GO-bp Annotation by Michelle Graham. GO Biological Process: response to hydrogen peroxide SoyBaseN/AISS
GO:0055085GO-bp Annotation by Michelle Graham. GO Biological Process: transmembrane transport SoyBaseN/AISS
GO:2000377GO-bp Annotation by Michelle Graham. GO Biological Process: regulation of reactive oxygen species metabolic process SoyBaseN/AISS
GO:0005886GO-cc Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane SoyBaseN/AISS
GO:0009941GO-cc Annotation by Michelle Graham. GO Cellular Compartment: chloroplast envelope SoyBaseN/AISS
GO:0005515GO-mf Annotation by Michelle Graham. GO Molecular Function: protein binding SoyBaseN/AISS
GO:0015299GO-mf Annotation by Michelle Graham. GO Molecular Function: solute:hydrogen antiporter activity SoyBaseN/AISS
GO:0015385GO-mf Annotation by Michelle Graham. GO Molecular Function: sodium:hydrogen antiporter activity SoyBaseN/AISS
KOG1965 KOG Sodium/hydrogen exchanger protein JGI ISS
PTHR10110Panther SODIUM/HYDROGEN EXCHANGER JGI ISS
PTHR10110:SF4Panther SODIUM/HYDROGEN EXCHANGER PLANT JGI ISS
PF00027PFAM Cyclic nucleotide-binding domain JGI ISS
PF00999PFAM Sodium/hydrogen exchanger family JGI ISS
UniRef100_H9CDQ2UniRef Annotation by Michelle Graham. Best UniRef hit: SOS1 n=1 Tax=Glycine max RepID=H9CDQ2_SOYBN SoyBaseE_val: 0ISS
UniRef100_H9CDQ2UniRef Annotation by Michelle Graham. Most informative UniRef hit: SOS1 n=1 Tax=Glycine max RepID=H9CDQ2_SOYBN SoyBaseE_val: 0ISS

Expression Patterns of Glyma08g09730
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma08g09730 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.08g092000 Wm82.a2.v1IGC As supplied by JGI

References for Glyma08g09730
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma08g09730
>Glyma08g09730.1   sequence type=CDS   gene model=Glyma08g09730   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGAGGAAGAACAACAACAACAACACCTTTCTCTTTCCATTTCACTTTCTGTTGTCTCTGCTGCTTCTTCTTCATCAGAGGAGAATTCCAATCCATCAGATGCAGTGATCTTCTTTGGTCTGAGTTTGGCTCTGGGGATTGCTTGTAGGCACCTCTTGCGTGGGACCAGAGTCCCTTATACTGTTGCCTTACTCATTCTTGGCATTGCACTTGGATCCATAGAATATGGTACTCATCATCGGCTGGGAAAGATTGGGGATGGAATTCGTATTTGGTCAGAGATTGATCCAGATCTTCTTTTAGCTGTTTTTCTTCCTGCTCTCCTTTTTGAGAGCTCATTCTTAATGGAAGTTCACCAAATTAAGAGGTGTCTTGCACAAATGATCTTACTAGCTGGCCCTGGTGTTGCGCTTTCTACTGTTTGTCTAGGAGTTGTTTTAAAGCTTACTTTTCCGTACAACTGGAGTTGGAAAACATCACTGTTGCTTGGAGGACTTCTGAGTGCTACTGATCCTGTTGCTGTTGTGGCTTTGTTGAAAGATCTTGGTGCCAGCAAAAAGCTAAGCACGATAATTGAAGGGGAATCCTTGATGAATGATGGGACTGCTATTGTGGTTTATACTCTTTTCTATCGGATGGTTCTTGGAGAGACCTTCAATTGGGTTGCTATAATCAAATTTCTAGCACAAGTCTCACTTGGAGCTGTAGGAATGGGTCTTGCTTTTGGGATTGCATCTGTTTTGTGGCTTGGGTTTATTTTTAATGATACAGTGATTGAGATTGCTCTAACATTTGCTGTTAGCTACATTGCTTATTTCACTGCTCAGGAGGGTTCAGGTGTTTCTGGTGTCTTGACGGTGATGTCTTTGGGAATGTTCTATTCTGCATTTGCAAGAACAGCTTTTAAGGGTGAAAGTCAACAAAGCTTACATCACTTTTGGGAAATGATCGCTTATATTGCTAATACCTTAATTTTCATTTTGAGTGGAGTTGTTATAGCTGAAGGAATACTTGGTGACGAAAATGTTTTCTATCATGGAACATCATGGACCCACCTCTTGCTTCTCTATGCATATGTTCAAGTGTCCCGGTGCATTGTAGTCGGAGCATTATTTCCCTTTCTAAGATATTTTGGATATGGTTTGGATTGGAAAGAAGCTATTATTCTCATCTGGTCAGGACTGCGAGGCGCAGTTGCCTTGGCACTTTCCTTATCAGTTAAGCGTTCGGGTGGCAAATCATCTGAATTGACTCCAGAGACAGGAACACTGTTTGTTTTCTTCACTGGTGGAACTGTGTTTTTAACACTTATAATAAATGGTTCAACCACACAATTCATTTTACACTACCTTGGCATGGATAAATTGTCAGCTGCTAAGAGACGGATCCTTAACTTCACAAAGTATGAAATGTTGAACAAGGCATTGGAGGCTTTTGGTGAACTTGGAGATGATGAGGAGCTTGGGCCTGCTGACTGGCCTACAGTGAAGAGATATATCTCCTGTTTAAATGACATTGAAGGTGAATGTGTTCACCCTCATGGAGCACCTGAAAATGATAGTAACCTAGATCCTATGAATTTGAAAGACATACGAGTACGCCTTCTGAATGGTGTACAAGCTGCTTACTGGGAGATGCTTGATGAAGGAAGAATTTCTCAAACAACAGCTAATATCCTAATGCTATCTGTCGAGGAAGCAGTAGATTTGGCTTCATCTGAGCCTCTATGTGACTGGAAAGGTTTAAAATCTAACGTCCATTTCCCGAATTACTATAAATTTCTACAGTCCAGTATGTTCCCACCGAAGTTAGTTACGTATTTCACCGTGGAAAGGTTGGAATCTGCATGTTATATTTGTGCTGCATTTCTTCGAGCTCACAGAATTGCCCGACAACAATTACATGACTTCATAGGAGACAGTGATATTGCTTCTGCTGTCATCAATGAAAGTGTTGTGGAAGGAGAAGAAGCACGGAAGTTCCTAGAAGATGTTAATGTTACATACCCTCAGGTTTTGCGTGTTGTAAAAACAAGGCAAGCAACATATGCAGTGCTAAATCATTTAATTGAATATGTTGAAAACCTTGAGAAGGCTGGGATATTGGAAGAGAAAGAGATGCTACAACTCCATGATGCTGTTCAGACTGATTTAAAGAAACTACTAAGAAATCCTCCTTTGGTTAAGCTTCCTAAAATAAGTAGTATCCATCCAATGTTGGGTGCTCTCCCATCTTCAGTTCGTGAATCACTTGCAAGTTGTACCAAGGAAATGATGAAATTGCGTGGTTTGACACTGTACAAGGAAGGTGCCAAATCAAATGGTATTTGGTTAATTTCTAATGGAGTGGTGAAGTGGGAAAGCAAGATGATAAGAACCAAGCACTCTTTTAATCCTACATTTACGCATGGGAGCACATTGGGTATTTATGAAGTGTTGACTGGAAGATCATATATCTGTGATGTCGTCACTGATTCCGTGGTATTCTGCATTTTTCTTGAAGCTGATAAGATAAGATCATGTCTCAAAGCAGATCCTTTGACGGAAAAATTCCTGTGGGAGGAAAGTGCTATTTTCCTTTCCAAATTATTGCTTCCTCAGATATTTGAGAAACTGGGTATGCAAGATTTAAGAACTCTTATTGCGGATTCCGAGAGATCTCGAATGACCATATTCATAAGAGGGGAAACAATAGAAATTCCTCATCATTCAGTTGCCCTCTTACTAGAAGGATATGTCAAAACTCAAGGTCGTCAAGAACTGGTAACAGCACCAGCAGCCCTGCTTCCTTCACATGGGAATCTAAGCTTCCAAAATTTGGCAAGTTCAGGTTCTAAGGAAGCTAGTTTTATTCATCAACAAGGATCTAGTTATCTAGTTGAAACTACAGCAAGAGTAATTCTGTTTGACATTCCAGCACCTGAGGCTGATGCTGCTCTTGTTAGAAGGTCAAGTTCACTGTTATCACATGCCGGGGATCATCCTCATAGATCTTTCCGTCGAAAACATAGTGGTCTTATGAGTTGGCCTGAACATTTCTACAAACAAGACCATAAGCAGAGATCTGAAGGAGCTGGGCGACAAACCAATAGTTTATCTGCAAGGGCAATGCAGCTGAGCATTTATGGGAGCATGGTGGACATCCCTCCCCGGAGTAGAAGTTTGTTAACCAATGATGGTAGACCACCTCATAGCTTGTCCTATCCAACCATTGTGTCACATCAAGGTCGTCCTCTTGTTTCAGTCAAATCAGAAGGAGCTGCAACTGCCAAGAAGGTCCATGAGGTCACAAGACATGTTACAAATCCACCTTCACAAAGCACAGAACGAAGACAGCATCACCATGGAGATAATTCAAGTGATGATTCTGGTGCTGAAGAAGAAGATATTATTGTGAGGATTGACTCACCAAGCACGCTATCTTTTCGCTAG
Predicted protein sequences of Glyma08g09730
>Glyma08g09730.1   sequence type=predicted peptide   gene model=Glyma08g09730   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MEEEQQQQHLSLSISLSVVSAASSSSEENSNPSDAVIFFGLSLALGIACRHLLRGTRVPYTVALLILGIALGSIEYGTHHRLGKIGDGIRIWSEIDPDLLLAVFLPALLFESSFLMEVHQIKRCLAQMILLAGPGVALSTVCLGVVLKLTFPYNWSWKTSLLLGGLLSATDPVAVVALLKDLGASKKLSTIIEGESLMNDGTAIVVYTLFYRMVLGETFNWVAIIKFLAQVSLGAVGMGLAFGIASVLWLGFIFNDTVIEIALTFAVSYIAYFTAQEGSGVSGVLTVMSLGMFYSAFARTAFKGESQQSLHHFWEMIAYIANTLIFILSGVVIAEGILGDENVFYHGTSWTHLLLLYAYVQVSRCIVVGALFPFLRYFGYGLDWKEAIILIWSGLRGAVALALSLSVKRSGGKSSELTPETGTLFVFFTGGTVFLTLIINGSTTQFILHYLGMDKLSAAKRRILNFTKYEMLNKALEAFGELGDDEELGPADWPTVKRYISCLNDIEGECVHPHGAPENDSNLDPMNLKDIRVRLLNGVQAAYWEMLDEGRISQTTANILMLSVEEAVDLASSEPLCDWKGLKSNVHFPNYYKFLQSSMFPPKLVTYFTVERLESACYICAAFLRAHRIARQQLHDFIGDSDIASAVINESVVEGEEARKFLEDVNVTYPQVLRVVKTRQATYAVLNHLIEYVENLEKAGILEEKEMLQLHDAVQTDLKKLLRNPPLVKLPKISSIHPMLGALPSSVRESLASCTKEMMKLRGLTLYKEGAKSNGIWLISNGVVKWESKMIRTKHSFNPTFTHGSTLGIYEVLTGRSYICDVVTDSVVFCIFLEADKIRSCLKADPLTEKFLWEESAIFLSKLLLPQIFEKLGMQDLRTLIADSERSRMTIFIRGETIEIPHHSVALLLEGYVKTQGRQELVTAPAALLPSHGNLSFQNLASSGSKEASFIHQQGSSYLVETTARVILFDIPAPEADAALVRRSSSLLSHAGDHPHRSFRRKHSGLMSWPEHFYKQDHKQRSEGAGRQTNSLSARAMQLSIYGSMVDIPPRSRSLLTNDGRPPHSLSYPTIVSHQGRPLVSVKSEGAATAKKVHEVTRHVTNPPSQSTERRQHHHGDNSSDDSGAEEEDIIVRIDSPSTLSFR*






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