Report for Sequence Feature Glyma08g09690
Feature Type: gene_model
Chromosome: Gm08
Start: 6889312
stop: 6891784
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma08g09690
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT2G02020 AT
Annotation by Michelle Graham. TAIR10: Major facilitator superfamily protein | chr2:479117-481131 FORWARD LENGTH=524
SoyBase E_val: 2.00E-130 ISS
GO:0006857 GO-bp
Annotation by Michelle Graham. GO Biological Process: oligopeptide transport
SoyBase N/A ISS
GO:0016020 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: membrane
SoyBase N/A ISS
GO:0005215 GO-mf
Annotation by Michelle Graham. GO Molecular Function: transporter activity
SoyBase N/A ISS
PTHR11654 Panther
OLIGOPEPTIDE TRANSPORTER-RELATED
JGI ISS
PTHR11654:SF37 Panther
OLIGOPEPTIDE TRANSPORTER-RELATED
JGI ISS
PF00854 PFAM
POT family
JGI ISS
UniRef100_I1KRN6 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein (Fragment) n=1 Tax=Glycine max RepID=I1KRN6_SOYBN
SoyBase E_val: 0 ISS
UniRef100_Q9ZTX4 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: LeOPT1 n=1 Tax=Solanum lycopersicum RepID=Q9ZTX4_SOLLC
SoyBase E_val: 3.00E-131 ISS
Expression Patterns of Glyma08g09690
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Gene model name correspondences to Glyma08g09690 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
References for Glyma08g09690
Coding sequences of Glyma08g09690
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma08g09690.1 sequence type=CDS gene model=Glyma08g09690 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
AGGGAGCAATACACAGGAGAGGGCTCAGTTAACTTTAGAGGAGAGCCTGTTCTAAAGAAGGATACTGGCAATTGGAGGGCTTGTCCTTTTATCCTAGGTACTATATCACATGAAGGAAACGTTTCTTCCGCAAGAAACATTAGCATCTGGCTTGGCACTTCTTATCTCACACCTCTCATTGGAGCCGTTCTAGCAGATGGTTACTGGGGTCGATACTGGACAATTGCTGTTTTCTCTGCGGTTTATTTCATTGGAATGTGTACCTTGACACTTTCTGCATCTTTACCAGCATTGAAGCCTTCTGAATGTTTGGGTTCTGTATGCCCTTCAGCTACTCCTGCACAATATTCTGTGTCCTACTTTGGTCTATACGTGATTGCGCTTGGGATCGGTGGTATAAAGTCATGTGTGCCATCTTTTGGAGCAGGTAAATTTGATAATACTGATCCAAAGGAAAGGGTTAAGAAGGGGTCGTTTTTCAATTGGTATTACTTTTCTATCAATCTAGGTGCCATTGTATCATGCAGCATAGTTGTGTGGATTCAAGACAATGCAGGATGGGGTCTTGGATTTGGCATTCCTACTTTGTTTATGGTATTATCTGTGGTAAGCTTCTTTAGAGGCACACCTCTCTACTGGTTTCAAAAAACAGGGGGAAGTCCTGTTACAAGAATGTGTCAGGTTTTGTGCACATTTGTCCAAAAGTGGAATTTGGTTGTTCCTCATAGTCTTTTGTATGAGACGTCAGATAAAATATCTACAATTAAAGGGAGTCACAAACTGGTGCGTAGTGATGATCTAAGAATTAGTTGTTTATGGGGAAAATGTTGGATGAGCCCTGCTCTAATGTTTCAGAAGTTTTTTGTGGATAGATTGCAATTAAACATATTTCTTTTAGCCTGTCTTTGCCGCATTGAGAAATTTGTGCTAAATTTTGAATCGATAATCTCTAGTATCCTCACTTTCTTAAAAATGCTCTTTCCTCCATACATAAACTATAAACAGGATTTCCTGCACCAAATCCCTCAGTACTTCTTACTGGGGGCAGCAGAAGTATTCGCATTCGTGGGACTGCTTCAGTTCTTCTATGATCAATCTCCAGATGCTATGAAGACTTTAGGTACTGCACTGTCACCTTTGTATTTTGCCTTGGGAAATTACTTGAGCTCTTTTATTCTTAATATGGTAACTTACTTCTCCACACAAGGTGGAAAGCTTGGCTGGATTCCTGATAATTTGAACAAGGGTCATCTCGATTATTTTTTCTTGCTTTTAGCTGGACTTAGCTTCTTAAATATGTTGGCATACGTT
Predicted protein sequences of Glyma08g09690
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma08g09690.1 sequence type=predicted peptide gene model=Glyma08g09690 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
REQYTGEGSVNFRGEPVLKKDTGNWRACPFILGTISHEGNVSSARNISIWLGTSYLTPLIGAVLADGYWGRYWTIAVFSAVYFIGMCTLTLSASLPALKPSECLGSVCPSATPAQYSVSYFGLYVIALGIGGIKSCVPSFGAGKFDNTDPKERVKKGSFFNWYYFSINLGAIVSCSIVVWIQDNAGWGLGFGIPTLFMVLSVVSFFRGTPLYWFQKTGGSPVTRMCQVLCTFVQKWNLVVPHSLLYETSDKISTIKGSHKLVRSDDLRISCLWGKCWMSPALMFQKFFVDRLQLNIFLLACLCRIEKFVLNFESIISSILTFLKMLFPPYINYKQDFLHQIPQYFLLGAAEVFAFVGLLQFFYDQSPDAMKTLGTALSPLYFALGNYLSSFILNMVTYFSTQGGKLGWIPDNLNKGHLDYFFLLLAGLSFLNMLAYV