Glyma08g09690 - SoyBase

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Report for Sequence Feature Glyma08g09690

Feature Type:	gene_model
Chromosome:	Gm08
Start:	6889312
stop:	6891784
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma08g09690

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT2G02020	AT	Annotation by Michelle Graham. TAIR10: Major facilitator superfamily protein \| chr2:479117-481131 FORWARD LENGTH=524	SoyBase	E_val: 2.00E-130	ISS
GO:0006857	GO-bp	Annotation by Michelle Graham. GO Biological Process: oligopeptide transport	SoyBase	N/A	ISS
GO:0016020	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: membrane	SoyBase	N/A	ISS
GO:0005215	GO-mf	Annotation by Michelle Graham. GO Molecular Function: transporter activity	SoyBase	N/A	ISS
PTHR11654	Panther	OLIGOPEPTIDE TRANSPORTER-RELATED	JGI		ISS
PTHR11654:SF37	Panther	OLIGOPEPTIDE TRANSPORTER-RELATED	JGI		ISS
PF00854	PFAM	POT family	JGI		ISS
UniRef100_I1KRN6	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein (Fragment) n=1 Tax=Glycine max RepID=I1KRN6_SOYBN	SoyBase	E_val: 0	ISS
UniRef100_Q9ZTX4	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: LeOPT1 n=1 Tax=Solanum lycopersicum RepID=Q9ZTX4_SOLLC	SoyBase	E_val: 3.00E-131	ISS

Expression Patterns of Glyma08g09690

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma08g09690 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments

References for Glyma08g09690

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma08g09690

Limit To All Plant Sequences

>Glyma08g09690.1   sequence type=CDS   gene model=Glyma08g09690   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
AGGGAGCAATACACAGGAGAGGGCTCAGTTAACTTTAGAGGAGAGCCTGTTCTAAAGAAGGATACTGGCAATTGGAGGGCTTGTCCTTTTATCCTAGGTACTATATCACATGAAGGAAACGTTTCTTCCGCAAGAAACATTAGCATCTGGCTTGGCACTTCTTATCTCACACCTCTCATTGGAGCCGTTCTAGCAGATGGTTACTGGGGTCGATACTGGACAATTGCTGTTTTCTCTGCGGTTTATTTCATTGGAATGTGTACCTTGACACTTTCTGCATCTTTACCAGCATTGAAGCCTTCTGAATGTTTGGGTTCTGTATGCCCTTCAGCTACTCCTGCACAATATTCTGTGTCCTACTTTGGTCTATACGTGATTGCGCTTGGGATCGGTGGTATAAAGTCATGTGTGCCATCTTTTGGAGCAGGTAAATTTGATAATACTGATCCAAAGGAAAGGGTTAAGAAGGGGTCGTTTTTCAATTGGTATTACTTTTCTATCAATCTAGGTGCCATTGTATCATGCAGCATAGTTGTGTGGATTCAAGACAATGCAGGATGGGGTCTTGGATTTGGCATTCCTACTTTGTTTATGGTATTATCTGTGGTAAGCTTCTTTAGAGGCACACCTCTCTACTGGTTTCAAAAAACAGGGGGAAGTCCTGTTACAAGAATGTGTCAGGTTTTGTGCACATTTGTCCAAAAGTGGAATTTGGTTGTTCCTCATAGTCTTTTGTATGAGACGTCAGATAAAATATCTACAATTAAAGGGAGTCACAAACTGGTGCGTAGTGATGATCTAAGAATTAGTTGTTTATGGGGAAAATGTTGGATGAGCCCTGCTCTAATGTTTCAGAAGTTTTTTGTGGATAGATTGCAATTAAACATATTTCTTTTAGCCTGTCTTTGCCGCATTGAGAAATTTGTGCTAAATTTTGAATCGATAATCTCTAGTATCCTCACTTTCTTAAAAATGCTCTTTCCTCCATACATAAACTATAAACAGGATTTCCTGCACCAAATCCCTCAGTACTTCTTACTGGGGGCAGCAGAAGTATTCGCATTCGTGGGACTGCTTCAGTTCTTCTATGATCAATCTCCAGATGCTATGAAGACTTTAGGTACTGCACTGTCACCTTTGTATTTTGCCTTGGGAAATTACTTGAGCTCTTTTATTCTTAATATGGTAACTTACTTCTCCACACAAGGTGGAAAGCTTGGCTGGATTCCTGATAATTTGAACAAGGGTCATCTCGATTATTTTTTCTTGCTTTTAGCTGGACTTAGCTTCTTAAATATGTTGGCATACGTT

Predicted protein sequences of Glyma08g09690

Limit To All Plant Sequences

>Glyma08g09690.1   sequence type=predicted peptide   gene model=Glyma08g09690   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
REQYTGEGSVNFRGEPVLKKDTGNWRACPFILGTISHEGNVSSARNISIWLGTSYLTPLIGAVLADGYWGRYWTIAVFSAVYFIGMCTLTLSASLPALKPSECLGSVCPSATPAQYSVSYFGLYVIALGIGGIKSCVPSFGAGKFDNTDPKERVKKGSFFNWYYFSINLGAIVSCSIVVWIQDNAGWGLGFGIPTLFMVLSVVSFFRGTPLYWFQKTGGSPVTRMCQVLCTFVQKWNLVVPHSLLYETSDKISTIKGSHKLVRSDDLRISCLWGKCWMSPALMFQKFFVDRLQLNIFLLACLCRIEKFVLNFESIISSILTFLKMLFPPYINYKQDFLHQIPQYFLLGAAEVFAFVGLLQFFYDQSPDAMKTLGTALSPLYFALGNYLSSFILNMVTYFSTQGGKLGWIPDNLNKGHLDYFFLLLAGLSFLNMLAYV

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