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Report for Sequence Feature Glyma08g09450

Feature Type:gene_model
Chromosome:Gm08
Start:6754307
stop:6756944
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma08g09450
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G37370AT Annotation by Michelle Graham. TAIR10: cytochrome P450, family 81, subfamily D, polypeptide 8 | chr4:17569971-17571678 REVERSE LENGTH=497 SoyBaseE_val: 0ISS
GO:0009723GO-bp Annotation by Michelle Graham. GO Biological Process: response to ethylene stimulus SoyBaseN/AISS
GO:0010286GO-bp Annotation by Michelle Graham. GO Biological Process: heat acclimation SoyBaseN/AISS
GO:0055114GO-bp Annotation by Michelle Graham. GO Biological Process: oxidation-reduction process SoyBaseN/AISS
GO:0080167GO-bp Annotation by Michelle Graham. GO Biological Process: response to karrikin SoyBaseN/AISS
GO:0005576GO-cc Annotation by Michelle Graham. GO Cellular Compartment: extracellular region SoyBaseN/AISS
GO:0005783GO-cc Annotation by Michelle Graham. GO Cellular Compartment: endoplasmic reticulum SoyBaseN/AISS
GO:0005886GO-cc Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane SoyBaseN/AISS
GO:0005506GO-mf Annotation by Michelle Graham. GO Molecular Function: iron ion binding SoyBaseN/AISS
GO:0009055GO-mf Annotation by Michelle Graham. GO Molecular Function: electron carrier activity SoyBaseN/AISS
GO:0016705GO-mf Annotation by Michelle Graham. GO Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen SoyBaseN/AISS
GO:0019825GO-mf Annotation by Michelle Graham. GO Molecular Function: oxygen binding SoyBaseN/AISS
GO:0020037GO-mf Annotation by Michelle Graham. GO Molecular Function: heme binding SoyBaseN/AISS
KOG0156 KOG Cytochrome P450 CYP2 subfamily JGI ISS
PTHR24298Panther FAMILY NOT NAMED JGI ISS
PTHR24298:SF44Panther JGI ISS
PF00067PFAM Cytochrome P450 JGI ISS
UniRef100_G8A1W0UniRef Annotation by Michelle Graham. Most informative UniRef hit: Cytochrome P450 monooxygenase n=1 Tax=Medicago truncatula RepID=G8A1W0_MEDTR SoyBaseE_val: 0ISS
UniRef100_I1KRL3UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein (Fragment) n=2 Tax=Glycine max RepID=I1KRL3_SOYBN SoyBaseE_val: 0ISS

Expression Patterns of Glyma08g09450
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma08g09450 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.08g089400 Wm82.a2.v1IGC As supplied by JGI

References for Glyma08g09450
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma08g09450
>Glyma08g09450.1   sequence type=CDS   gene model=Glyma08g09450   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGGTCCTTTGTTGTACTCCTCTCTCCTTGTTCTTGTTTTGATCCTCAGGTTTGTGCAAAGAAGAAGAGTAAAAAATCTTCCACCATGTCCACCAAGTCTTCCCCTAATCGGCAACCTCCACTACATAAAAAGCCCACTCCACCGCTCCCTCCTCAGCCTATCAGAAAAGTACGGCCCCATCTTCTCCCTCTGGTTCGGTTCACGCTTTGTGGTTGTCATCTCCTCCCCAACCTTGCTTCAAGAATGCTTCACCAAACACGACATCGTCCTCGCCAACCGCCCGCGCTTCCTCACCGGAAAATACCTCTTCTACAACTACTCAAGCATGGGCTCCTCCCCCTACGGCGACCACTGGCGCAACCTCCGCCGCATCATCACCATCGACGTCCTCTCGACGTCGCGCCTCAACTCCTTCTTTGAAATCCGAAGGGAGGAAACCATGAGGGTCATACAAAAGCTTGCTAGGGAAACATGCAATGGCTTCGCCCTGGTGCATCTCAGACCCAGGCTCACAGAGATGACATTCAACAACATGATGAGAATGATATCAGGGAAGAGGTACTACGGCGACGACATCGAGGCGGCGGATGCGGAGGAAGCGAAGCAATTCAGAGACATAATGACGGAGGTTATGTCGCTGTTGGGTGCAAACAACAAGGGAGACTTCTTGCCCTTCCTTCGGTGGTTTGATTTTGACGGTTTGGAGAAGAGGCTGAAGGTGATTAGCACGAGGGCAGATTCGTTCTTGCAAGGACTCCTCGAAGAGCATCGTAGTGGGAAGCACAAGGCCAACACCATGATAGAACATCTCTTGACTATGCAAGAGTCTCAGCCTCATTACTACTCGGATCACATTATCAAAGGCCTTATTCAGGGTATGCTGCTTGCTGGAACAGACACAACAGCCGTGGCTATAGAGTGGGCAGTATCTTCTTTATTAAACCACCCAGAGATATTGAAGAAAGCAAAGGATGAAATAGACAACATGGTAGGACAAGATCGCTTGGTGGATGAGTCAGACATTCCAAAACTTCCTTATCTTCAAAACATTATTTACGAGACACTTAGATTGTTTGCTCCAGCACCATTACTATTGCCTCATTATTCTTCAGAAGAGTGCACCATAGGGGGATTCACTATTCCACGTGACACCATAGTGTTGATCAATGCATGGGCCATTCAAAGAGATCCTGAACATTGGAGTGATGCTACATGTTTTAAGCCCGAGAGATTTGAACAAGAAGGGGAAGCAAACAAGTTGATTCCATTCGGATTGGGAAGAAGAGCTTGTCCCGGAATCGGTTTGGCACATCGTTCAATGGGCTTAACTTTGGGATTATTGATTCAATGCTTTGAATGGAAACGACCAACTGATGAAGAGATTGATATGAGGGAGAATAAAGGGCTGGCATTGCCAAAGCTAATTCCATTGGAAGCTATGTTTAAAACACGACCAATCAGCGAGAAAGTTATGCAACAATTAGCTATATTTGGTACCTAA
Predicted protein sequences of Glyma08g09450
>Glyma08g09450.1   sequence type=predicted peptide   gene model=Glyma08g09450   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MGPLLYSSLLVLVLILRFVQRRRVKNLPPCPPSLPLIGNLHYIKSPLHRSLLSLSEKYGPIFSLWFGSRFVVVISSPTLLQECFTKHDIVLANRPRFLTGKYLFYNYSSMGSSPYGDHWRNLRRIITIDVLSTSRLNSFFEIRREETMRVIQKLARETCNGFALVHLRPRLTEMTFNNMMRMISGKRYYGDDIEAADAEEAKQFRDIMTEVMSLLGANNKGDFLPFLRWFDFDGLEKRLKVISTRADSFLQGLLEEHRSGKHKANTMIEHLLTMQESQPHYYSDHIIKGLIQGMLLAGTDTTAVAIEWAVSSLLNHPEILKKAKDEIDNMVGQDRLVDESDIPKLPYLQNIIYETLRLFAPAPLLLPHYSSEECTIGGFTIPRDTIVLINAWAIQRDPEHWSDATCFKPERFEQEGEANKLIPFGLGRRACPGIGLAHRSMGLTLGLLIQCFEWKRPTDEEIDMRENKGLALPKLIPLEAMFKTRPISEKVMQQLAIFGT*






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