Report for Sequence Feature Glyma08g09191
Feature Type: gene_model
Chromosome: Gm08
Start: 6571150
stop: 6576254
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma08g09191
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT1G31040 AT
Annotation by Michelle Graham. TAIR10: PLATZ transcription factor family protein | chr1:11069793-11072182 REVERSE LENGTH=243
SoyBase E_val: 2.00E-77 ISS
GO:0008150 GO-bp
Annotation by Michelle Graham. GO Biological Process: biological process
SoyBase N/A ISS
GO:0005739 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: mitochondrion
SoyBase N/A ISS
PF04640 PFAM
PLATZ transcription factor
JGI ISS
UniRef100_I1MGV8 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=2 Tax=Glycine max RepID=I1MGV8_SOYBN
SoyBase E_val: 3.00E-96 ISS
UniRef100_Q948W7 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Zinc-binding protein n=1 Tax=Pisum sativum RepID=Q948W7_PEA
SoyBase E_val: 3.00E-83 ISS
Expression Patterns of Glyma08g09191
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma08g09191
Paralog Evidence Comments
Glyma05g26271 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma08g09191 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.08g086900 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma08g09191
Transcripts of Glyma08g09191
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma08g09191.2 sequence type=transcript gene model=Glyma08g09191 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGACTAAAACAACATGTACATAGAGGATTGGTAATTGACGGGTAGTGTTAACTCTTATGACTTATGAGTTAATAGTATAGCAGAGAGAGAGAGAGAGAGTGAGGCCAGGGGTTTGGGATCAAAGATCAATGAAGGGCAGTGAGGCATCATCAGGAGGAGACATGAGTGTGAAGCCTGCATCTGCATGGCTTGAGAGGCTTATGGCTGAGACATTCTTTGGTGGTTGTGGGGTCCACCAGAATCACAAGAAGAACGAGAAGAACATCTTTTGCTTGCACTGTTGCCTTAGCATCTGCCCCCACTGCCTCCCTTCTCACCGCTCCCATTCCCTTCTCCAGGTGAGAAGGTATGTTTACCATGACGTGGTTCGATTGGGTGATCTGGAAAAGCTCGTCGATTGTTCCAATATTCAGCCATATACCATTAACGGTGCGAAAGTGATATTCTTAAATCAGAGGCCACAGTCAAGGTCATGCAAAGGCACTGCCAATGCTTGCTGCACTTGTGACAGGATTCTTCAGGAGCCCTTTCACTTCTGCTGTCTGTCATGCAAGTTCGAGGGTCTAAGAGTTGATTGCTATACCCAATTTGTCCCCACCTCCTCCTGCTCGAATACTGAGGCTACCAGTAACAGCATTGCCAACAACAACAACAACAAGAACACCAATGGCTTCTTCCTCTCTCTTGGAAGCAGGAGAAAGGGGGCTCCCCATAGAGCTCCACTCTCCTAGCGAAACCAAATAAATATGGGTACATTTTATTATTTGACCTAAACTTATGAACTAATAAATGAGTTCTAGGTTTTAGGTTATGTCACCTTTGCTATGTGTATTTTCTCTCTCTCACAATTGTATCTTCCTTTGAAGGATCTTATTTGCGGGAATTGGATTTGCTGCAATGATGCAGAAATAAATTTAGACCGTTGAATGAAGATTGAACAGTTTATATTTTGACTGTTTATTTTAAGTTTAGCATTTGAGTTAAAATATGATTCGTGTGATCTTCATCGGATGATGTCCATTAATTGACTGCGTAGATGCATTAAAACTCTGACTGCAGAGAATCTGGATCCTTATTAGAGGCATAGTGATCACTATTTGTTTATGTTCTTGAGTTAGTGTCTGTATTAATTTTCAATTCAACACATTACTAGAGTCGGCATAGTGAAGAGAAGATTTGGATAGTATGTATAAGATAATTAGGTTTTAATTTCAGTGTGATTATTGTAAAAAAAAAAATATTATGCTTGTATTGATTTGAAGAATTTTTCATTATCATCTAAGGTGGTTAACGAAGCTGCCAATTTTGCTATGATGAAATGGAAATTT
Coding sequences of Glyma08g09191
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma08g09191.1 sequence type=CDS gene model=Glyma08g09191 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGAAGGGCAGTGAGGCATCATCAGGAGGAGACATGAGTGTGAAGCCTGCATCTGCATGGCTTGAGAGGCTTATGGCTGAGACATTCTTTGGTGGTTGTGGGGTCCACCAGAATCACAAGAAGAACGAGAAGAACATCTTTTGCTTGCACTGTTGCCTTAGCATCTGCCCCCACTGCCTCCCTTCTCACCGCTCCCATTCCCTTCTCCAGGTGAGAAGGTATGTTTACCATGACGTGGTTCGATTGGGTGATCTGGAAAAGCTCGTCGATTGTTCCAATATTCAGCCATATACCATTAACGGTGCGAAAGTGATATTCTTAAATCAGAGGCCACAGTCAAGGTCATGCAAAGGCACTGCCAATGCTTGCTGCACTTGTGACAGGATTCTTCAGGAGCCCTTTCACTTCTGCTGTCTGTCATGCAAGTTCGAGGGTCTAAGAGTTGATTGCTATACCCAATTTGTCCCCACCTCCTCCTGCTCGAATACTGAGGCTACCAGTAACAGCATTGCCAACAACAACAACAACAAGAACACCAATGGCTTCTTCCTCTCTCTTGGAAGCAGGAGAAAGGGGGCTCCCCATAGAGCTCCACTCTCCTAG
>Glyma08g09191.2 sequence type=CDS gene model=Glyma08g09191 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGAAGGGCAGTGAGGCATCATCAGGAGGAGACATGAGTGTGAAGCCTGCATCTGCATGGCTTGAGAGGCTTATGGCTGAGACATTCTTTGGTGGTTGTGGGGTCCACCAGAATCACAAGAAGAACGAGAAGAACATCTTTTGCTTGCACTGTTGCCTTAGCATCTGCCCCCACTGCCTCCCTTCTCACCGCTCCCATTCCCTTCTCCAGGTGAGAAGGTATGTTTACCATGACGTGGTTCGATTGGGTGATCTGGAAAAGCTCGTCGATTGTTCCAATATTCAGCCATATACCATTAACGGTGCGAAAGTGATATTCTTAAATCAGAGGCCACAGTCAAGGTCATGCAAAGGCACTGCCAATGCTTGCTGCACTTGTGACAGGATTCTTCAGGAGCCCTTTCACTTCTGCTGTCTGTCATGCAAGTTCGAGGGTCTAAGAGTTGATTGCTATACCCAATTTGTCCCCACCTCCTCCTGCTCGAATACTGAGGCTACCAGTAACAGCATTGCCAACAACAACAACAACAAGAACACCAATGGCTTCTTCCTCTCTCTTGGAAGCAGGAGAAAGGGGGCTCCCCATAGAGCTCCACTCTCCTAG
Predicted protein sequences of Glyma08g09191
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma08g09191.1 sequence type=predicted peptide gene model=Glyma08g09191 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MKGSEASSGGDMSVKPASAWLERLMAETFFGGCGVHQNHKKNEKNIFCLHCCLSICPHCLPSHRSHSLLQVRRYVYHDVVRLGDLEKLVDCSNIQPYTINGAKVIFLNQRPQSRSCKGTANACCTCDRILQEPFHFCCLSCKFEGLRVDCYTQFVPTSSCSNTEATSNSIANNNNNKNTNGFFLSLGSRRKGAPHRAPLS*
>Glyma08g09191.2 sequence type=predicted peptide gene model=Glyma08g09191 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MKGSEASSGGDMSVKPASAWLERLMAETFFGGCGVHQNHKKNEKNIFCLHCCLSICPHCLPSHRSHSLLQVRRYVYHDVVRLGDLEKLVDCSNIQPYTINGAKVIFLNQRPQSRSCKGTANACCTCDRILQEPFHFCCLSCKFEGLRVDCYTQFVPTSSCSNTEATSNSIANNNNNKNTNGFFLSLGSRRKGAPHRAPLS*