Glyma08g08761 - SoyBase

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Report for Sequence Feature Glyma08g08761

Feature Type:	gene_model
Chromosome:	Gm08
Start:	6264865
stop:	6267352
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma08g08761

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT1G03670	AT	Annotation by Michelle Graham. TAIR10: ankyrin repeat family protein \| chr1:914222-916222 REVERSE LENGTH=616	SoyBase	E_val: 5.00E-11	ISS
GO:0008150	GO-bp	Annotation by Michelle Graham. GO Biological Process: biological process	SoyBase	N/A	ISS
GO:0005575	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: cellular component	SoyBase	N/A	ISS
GO:0003674	GO-mf	Annotation by Michelle Graham. GO Molecular Function: molecular function	SoyBase	N/A	ISS
PF00023	PFAM	Ankyrin repeat	JGI		ISS
UniRef100_B9T576	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Ankyrin repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9T576_RICCO	SoyBase	E_val: 2.00E-24	ISS
UniRef100_UPI000233982C	UniRef	Annotation by Michelle Graham. Best UniRef hit: UPI000233982C related cluster n=1 Tax=unknown RepID=UPI000233982C	SoyBase	E_val: 7.00E-50	ISS

Expression Patterns of Glyma08g08761

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma08g08761 not represented in the dataset	Glyma08g08761 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma08g08761 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments

References for Glyma08g08761

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma08g08761

Limit To All Plant Sequences

>Glyma08g08761.1   sequence type=CDS   gene model=Glyma08g08761   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGATGAAATACCAAGTTTATGTTCCTGTAATGTTAAGTGAAGATATTTCAGCAGCCATCATCACCACCACCCTTCATATATACTTGACATCTACACCTGTTTCGGAACAATTTGTGACTCAGATTCTTGAGAAATGTAGAGATCTAGCTCTACTCACTAACGCCAAGGGAGAAACACCCCTTCACATCGCTGCATATGGACACTCCAATATCACAAACTTATTGGTTGAACATGTCAAAGCTTTTCCAGCAGCAAACAAGTTTATGAGGGCTAGAAATGATGAGAAGGACACTGCATTACATGAGGCTGTGCGCAATCATCACATTGAAGTAGTGAAGACCTTGTTAGAAATGGATCCTGATTACTCCTATGAGACTCCACTTTATCTGCCTTCAGAAAGACAATATCAGCAAGTGGTGGCTCAGATATCAAACAAAGTGAAAGCACCGGCATATGTTGGCCCCAATAATCAGTAG

Predicted protein sequences of Glyma08g08761

Limit To All Plant Sequences

>Glyma08g08761.1   sequence type=predicted peptide   gene model=Glyma08g08761   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MMKYQVYVPVMLSEDISAAIITTTLHIYLTSTPVSEQFVTQILEKCRDLALLTNAKGETPLHIAAYGHSNITNLLVEHVKAFPAANKFMRARNDEKDTALHEAVRNHHIEVVKTLLEMDPDYSYETPLYLPSERQYQQVVAQISNKVKAPAYVGPNNQ*

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