Report for Sequence Feature Glyma08g08610
Feature Type: gene_model
Chromosome: Gm08
Start: 6137104
stop: 6141865
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma08g08610
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT3G58130 AT
Annotation by Michelle Graham. TAIR10: N-acetylglucosaminylphosphatidylinositol de-N-acetylase family protein | chr3:21527946-21529654 FORWARD LENGTH=257
SoyBase E_val: 7.00E-102 ISS
GO:0008150 GO-bp
Annotation by Michelle Graham. GO Biological Process: biological process
SoyBase N/A ISS
GO:0005576 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: extracellular region
SoyBase N/A ISS
GO:0003674 GO-mf
Annotation by Michelle Graham. GO Molecular Function: molecular function
SoyBase N/A ISS
KOG3332
KOG
N-acetylglucosaminyl phosphatidylinositol de-N-acetylase
JGI ISS
PTHR12993 Panther
N-ACETYLGLUCOSAMINYL-PHOSPHATIDYLINOSITOL DE-N-ACETYLASE-RELATED
JGI ISS
PTHR12993:SF2 Panther
N-ACETYLGLUCOSAMINYL-PHOSPHATIDYLINOSITOL DE-N-ACETYLASE
JGI ISS
PF02585 PFAM
GlcNAc-PI de-N-acetylase
JGI ISS
UniRef100_E7DDW7 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase-like protein n=1 Tax=Zea mays RepID=E7DDW7_MAIZE
SoyBase E_val: 2.00E-94 ISS
UniRef100_I1KRC3 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=2 Tax=Glycine max RepID=I1KRC3_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma08g08610
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma08g08610
Paralog Evidence Comments
Glyma05g25650 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma08g08610 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.08g081300 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma08g08610
Transcripts of Glyma08g08610
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma08g08610.3 sequence type=transcript gene model=Glyma08g08610 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATAAGACTTTATTAAAAGAGATAAAACTCAATTTGGTGATTTTTATGTTTAAAAAGTTAGTCTGATGACTTCTAATAATAGACATGTGAATCTATAATGCAACACTTACTCATTTAGAAAAAAAATAACTTCTATTTTTAAAAAAATTATTGAATTTACCTTTCATCCCTTTTCTTACACAACTAGGTTTTATGATTCATTTGCTGGTACCATTATTTATATTATTTTAATAAATTTGAGCGAAGAGAATGCGTTGATGATACGATAGCTTTTGTCTGCATTCTGGATTCTGAGGGCTGAGGGCTTGAATCTTGTTGATCGATGGCCTTCATTCTCATAATTGCTTCTCTTGTTCTATTTCTGTGGATCGTTTCTCTTTGCAAAGTTCTCCTTCTCCCCCGCATCCCTTTCGCCAAACATTTTACGAATAACAATGGCAGAGCATTTCGGAAGAGAAATGTCTTGTTGGTTATTGCTCATCCCGATGACGAATCCATGTTCTTTACTCCAACTATAAATTTTCTGACTTCAAAGGGGCATAATGTTCAAATACTTTGCTTATCTATAGGTGATGCAGATGGCAAAGGAAATATCAGAAAACAAGAGCTTTTTCAGGCTTGTGTAGCCCTCAAGGTTCCGATGCAACAAGTGAAGATTGTCAACCATCCTGATCTGCAGGATGGTTTTGGTAAAGTTTGGAACCATAGCTTATTGGCAAAGATTATTGAGGAAGAAATAACCAGTCGTTGCATTGATATGATTATTACCTTTGACAGCTATGGTGTCTCAGGTCATTGTAATCATCGTGATGTGCATTATGGAGTATGCAAGCTACTGCATGATATTTTACAAAGGGATATTGAAGTTTGGGAGCTTTGCTTGGTAAATGAACATTCCCGTAGGAGCGGTATTGCAATGGCCCAACATTCAAGCCAGTGGGTGTGGTACGCATGCTTTACCTTACTTTTATTATAAAAACTATAGACTAAATGTCTTTCCTTGAAATTTTGCAAATGTTTAGTTTGGATTCTATTTCTTTTAATGTTTTTCCTTCCTTTAATCTTTGCCCTCCTTGTGTCAATATTGCAATCTATCACACATGACATCTATGTTATATATATTTAGAAACTTCGACTGAAATTATCTCAAAGAAGCATTGCTCAACAGCACATCTTTTTATCTCCATCTTAATTCTTTTTTGCAGGTTCCGCAAGCTTTTTGTAACCTTGTCCAGTTATACCTATATGAACACTCTTAGAAAGGTAAAGTAAAGATGCAATGCTGAAGGAGTTGTGTTGCTTGTGAGATCAGCTTTCATTTTTTTGCAAACCTGCTCCTGCTCTGTATCTATAATCTTTCTTCCGGGTTCAAGCTAAATACATTATGTGGATTGTACTCTGCGGCTCAAGCAGCCTTTCACTTTCTCATGACATGATTGAACGGAATCACTGCTAATTTTCTTCCAAATATCCTAGGTGCATATCAGTGGTCTGGTCTAAGTTTATCAGATTTTGTTTACTGAGTTTTCAATTTATTGTATTGATAAAGTAGCACAATAATATTCTTTACTACCGATGTATTAGCAAATAGCCATGAATCCTTCGTGACTTTTTCGATCAATCTTGAATCACCGACGGGCTAAAACTTGTAATTAATTGTCCTGTAATTATATTATATTTGGCCAACTTATTTTTTTTATCGGTAGGAATCAAACTCAGATAATTTGGATTTACACTCAATTGTCAAATACTTGTATGTGTCTTGGTTAAGTAAATTCAAATTAAGTAAGCTATAAAGCAT
>Glyma08g08610.4 sequence type=transcript gene model=Glyma08g08610 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATAAGACTTTATTAAAAGAGATAAAACTCAATTTGGTGATTTTTATGTTTAAAAAGTTAGTCTGATGACTTCTAATAATAGACATGTGAATCTATAATGCAACACTTACTCATTTAGAAAAAAAATAACTTCTATTTTTAAAAAAATTATTGAATTTACCTTTCATCCCTTTTCTTACACAACTAGGTTTTATGATTCATTTGCTGGTACCATTATTTATATTATTTTAATAAATTTGAGCGAAGAGAATGCGTTGATGATACGATAGCTTTTGTCTGCATTCTGGATTCTGAGGGCTGAGGGCTTGAATCTTGTTGATCGATGGCCTTCATTCTCATAATTGCTTCTCTTGTTCTATTTCTGTGGATCGTTTCTCTTTGCAAAGTTCTCCTTCTCCCCCGCATCCCTTTCGCCAAACATTTTACGAATAACAATGGCAGAGCATTTCGGAAGAGAAATGTCTTGTTGGTTATTGCTCATCCCGATGACGAATCCATGTTCTTTACTCCAACTATAAATTTTCTGACTTCAAAGGGGCATAATGTTCAAATACTTTGCTTATCTATAGGTGATGCAGATGGCAAAGGAAATATCAGAAAACAAGAGCTTTTTCAGGCTTGTGTAGCCCTCAAGGTTCCGATGCAACAAGTGAAGATTGTCAACCATCCTGATCTGCAGGATGGTTTTGGTAAAGTTTGGAACCATAGCTTATTGGCAAAGATTATTGAGGAAGAAATAACCAGTCGTTGCATTGATATGATTATTACCTTTGACAGCTATGGTGTCTCAGGTCATTGTAATCATCGTGATGTGCATTATGGAGTATGCAAGCTACTGCATGATATTTTACAAAGGGATATTGAAGTTTGGGAGCTTGTATGTATTTTCTTTGTTTTATTTTCTCATCTTATTTGACCAATTATTTTATTATAACTCATACCAATTGCCTTATTCTCCTGGGATATCTTCATTATTCTTAGGTTAGCACCAATATTTTGCGCAAATATAGTGGTCCTGTTGATATCTGGTTGTCCATATTTTTGACCATGCTGCACACAAATGGAACAATGCAGTGCTTGGTAAATGAACATTCCCGTAGGAGCGGTATTGCAATGGCCCAACATTCAAGCCAGTGGGTGTGGTACGCATGCTTTACCTTACTTTTATTATAAAAACTATAGACTAAATGTCTTTCCTTGAAATTTTGCAAATGTTTAGTTTGGATTCTATTTCTTTTAATGTTTTTCCTTCCTTTAATCTTTGCCCTCCTTGTGTCAATATTGCAATCTATCACACATGACATCTATGTTATATATATTTAGAAACTTCGACTGAAATTATCTCAAAGAAGCATTGCTCAACAGCACATCTTTTTATCTCCATCTTAATTCTTTTTTGCAGGTTCCGCAAGCTTTTTGTAACCTTGTCCAGTTATACCTATATGAACACTCTTAGAAAGGTAAAGTAAAGATGCAATGCTGAAGGAGTTGTGTTGCTTGTGAGATCAGCTTTCATTTTTTTGCAAACCTGCTCCTGCTCTGTATCTATAATCTTTCTTCCGGGTTCAAGCTAAATACATTATGTGGATTGTACTCTGCGGCTCAAGCAGCCTTTCACTTTCTCATGACATGATTGAACGGAATCACTGCTAATTTTCTTCCAAATATCCTAGGTGCATATCAGTGGTCTGGTCTAAGTTTATCAGATTTTGTTTACTGAGTTTTCAATTTATTGTATTGATAAAGTAGCACAATAATATTCTTTACTACCGATGTATTAGCAAATAGCCATGAATCCTTCGTGACTTTTTCGATCAATCTTGAATCACCGACGGGCTAAAACTTGTAATTAATTGTCCTGTAATTATATTATATTTGGCCAACTTATTTTTTTTATCGGTAGGAATCAAACTCAGATAATTTGGATTTACACTCAATTGTCAAATACTTGTATGTGTCTTGGTTAAGTAAATTCAAATTAAGTAAGCTATAAAGCAT
Coding sequences of Glyma08g08610
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma08g08610.1 sequence type=CDS gene model=Glyma08g08610 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGCCTTCATTCTCATAATTGCTTCTCTTGTTCTATTTCTGTGGATCGTTTCTCTTTGCAAAGTTCTCCTTCTCCCCCGCATCCCTTTCGCCAAACATTTTACGAATAACAATGGCAGAGCATTTCGGAAGAGAAATGTCTTGTTGGTTATTGCTCATCCCGATGACGAATCCATGTTCTTTACTCCAACTATAAATTTTCTGACTTCAAAGGGGCATAATGTTCAAATACTTTGCTTATCTATAGGTGATGCAGATGGCAAAGGAAATATCAGAAAACAAGAGCTTTTTCAGGCTTGTGTAGCCCTCAAGGTTCCGATGCAACAAGTGAAGATTGTCAACCATCCTGATCTGCAGGATGGTTTTGGTAAAGTTTGGAACCATAGCTTATTGGCAAAGATTATTGAGGAAGAAATAACCAGTCGTTGCATTGATATGATTATTACCTTTGACAGCTATGGTGTCTCAGGTCATTGTAATCATCGTGATGTGCATTATGGAGTATGCAAGCTACTGCATGATATTTTACAAAGGGATATTGAAGTTTGGGAGCTTGTTAGCACCAATATTTTGCGCAAATATAGTGGTCCTGTTGATATCTGGTTGTCCATATTTTTGACCATGCTGCACACAAATGGAACAATGCAGTGCTTGGTAAATGAACATTCCCGTAGGAGCGGTATTGCAATGGCCCAACATTCAAGCCAGTGGGTGTGGTTCCGCAAGCTTTTTGTAACCTTGTCCAGTTATACCTATATGAACACTCTTAGAAAGGTAAAGTAA
>Glyma08g08610.3 sequence type=CDS gene model=Glyma08g08610 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGCCTTCATTCTCATAATTGCTTCTCTTGTTCTATTTCTGTGGATCGTTTCTCTTTGCAAAGTTCTCCTTCTCCCCCGCATCCCTTTCGCCAAACATTTTACGAATAACAATGGCAGAGCATTTCGGAAGAGAAATGTCTTGTTGGTTATTGCTCATCCCGATGACGAATCCATGTTCTTTACTCCAACTATAAATTTTCTGACTTCAAAGGGGCATAATGTTCAAATACTTTGCTTATCTATAGGTGATGCAGATGGCAAAGGAAATATCAGAAAACAAGAGCTTTTTCAGGCTTGTGTAGCCCTCAAGGTTCCGATGCAACAAGTGAAGATTGTCAACCATCCTGATCTGCAGGATGGTTTTGGTAAAGTTTGGAACCATAGCTTATTGGCAAAGATTATTGAGGAAGAAATAACCAGTCGTTGCATTGATATGATTATTACCTTTGACAGCTATGGTGTCTCAGGTCATTGTAATCATCGTGATGTGCATTATGGAGTATGCAAGCTACTGCATGATATTTTACAAAGGGATATTGAAGTTTGGGAGCTTTGCTTGGTAAATGAACATTCCCGTAGGAGCGGTATTGCAATGGCCCAACATTCAAGCCAGTGGGTGTGGTACGCATGCTTTACCTTACTTTTATTATAA
>Glyma08g08610.4 sequence type=CDS gene model=Glyma08g08610 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGCCTTCATTCTCATAATTGCTTCTCTTGTTCTATTTCTGTGGATCGTTTCTCTTTGCAAAGTTCTCCTTCTCCCCCGCATCCCTTTCGCCAAACATTTTACGAATAACAATGGCAGAGCATTTCGGAAGAGAAATGTCTTGTTGGTTATTGCTCATCCCGATGACGAATCCATGTTCTTTACTCCAACTATAAATTTTCTGACTTCAAAGGGGCATAATGTTCAAATACTTTGCTTATCTATAGGTGATGCAGATGGCAAAGGAAATATCAGAAAACAAGAGCTTTTTCAGGCTTGTGTAGCCCTCAAGGTTCCGATGCAACAAGTGAAGATTGTCAACCATCCTGATCTGCAGGATGGTTTTGGTAAAGTTTGGAACCATAGCTTATTGGCAAAGATTATTGAGGAAGAAATAACCAGTCGTTGCATTGATATGATTATTACCTTTGACAGCTATGGTGTCTCAGGTCATTGTAATCATCGTGATGTGCATTATGGAGTATGCAAGCTACTGCATGATATTTTACAAAGGGATATTGAAGTTTGGGAGCTTGTATGTATTTTCTTTGTTTTATTTTCTCATCTTATTTGA
Predicted protein sequences of Glyma08g08610
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma08g08610.1 sequence type=predicted peptide gene model=Glyma08g08610 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MAFILIIASLVLFLWIVSLCKVLLLPRIPFAKHFTNNNGRAFRKRNVLLVIAHPDDESMFFTPTINFLTSKGHNVQILCLSIGDADGKGNIRKQELFQACVALKVPMQQVKIVNHPDLQDGFGKVWNHSLLAKIIEEEITSRCIDMIITFDSYGVSGHCNHRDVHYGVCKLLHDILQRDIEVWELVSTNILRKYSGPVDIWLSIFLTMLHTNGTMQCLVNEHSRRSGIAMAQHSSQWVWFRKLFVTLSSYTYMNTLRKVK*
>Glyma08g08610.3 sequence type=predicted peptide gene model=Glyma08g08610 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MAFILIIASLVLFLWIVSLCKVLLLPRIPFAKHFTNNNGRAFRKRNVLLVIAHPDDESMFFTPTINFLTSKGHNVQILCLSIGDADGKGNIRKQELFQACVALKVPMQQVKIVNHPDLQDGFGKVWNHSLLAKIIEEEITSRCIDMIITFDSYGVSGHCNHRDVHYGVCKLLHDILQRDIEVWELCLVNEHSRRSGIAMAQHSSQWVWYACFTLLLL*
>Glyma08g08610.4 sequence type=predicted peptide gene model=Glyma08g08610 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MAFILIIASLVLFLWIVSLCKVLLLPRIPFAKHFTNNNGRAFRKRNVLLVIAHPDDESMFFTPTINFLTSKGHNVQILCLSIGDADGKGNIRKQELFQACVALKVPMQQVKIVNHPDLQDGFGKVWNHSLLAKIIEEEITSRCIDMIITFDSYGVSGHCNHRDVHYGVCKLLHDILQRDIEVWELVCIFFVLFSHLI*