Report for Sequence Feature Glyma08g07450
Feature Type: gene_model
Chromosome: Gm08
Start: 5327091
stop: 5329178
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma08g07450
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT4G33590 AT
Annotation by Michelle Graham. TAIR10: unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G33600.1); Has 126 Blast hits to 126 proteins in 35 species: Archae - 0; Bacteria - 12; Metazoa - 0; Fungi - 21; Plants - 62; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). | chr4:16142585-16143985 REVERSE LENGTH=466
SoyBase E_val: 0 ISS
GO:0005576 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: extracellular region
SoyBase N/A ISS
UniRef100_I1KR02 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein (Fragment) n=1 Tax=Glycine max RepID=I1KR02_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma08g07450
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Gene model name correspondences to Glyma08g07450 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.08g069900 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma08g07450
Coding sequences of Glyma08g07450
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma08g07450.2 sequence type=CDS gene model=Glyma08g07450 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGACTGCCAAAGCACATAATGAAATATGCAGATTAAGCCCTCAAAAGCTTATCCTGATCAAACACAATCGAGGTAATTTTACAATTGTCATCTTAATCACTTGTGTCACATTCCTCATTGCATTGCACACCCAGTTCTTCCTTCAAACTCCACCACCACCATCATCATGGGAAACTTCAATCTTCAACACCACTCACAACGAGCTCAATTCCACGGTCCATAAGCTTCGTTCCTCGGTCACGTTTCTTCCACTCAAGGATCTCCGCCATGCACGTGCACCCCTTGAAGGCCACACATGGTTCATGAGTTCCATGTATGACACACACGAAGATGGTGAGGTCCAATACCAGCAATTCCCATCAGAATCATCACATGGTAAGCTTCTATGTCTCAAAGGACGCGACACGCATGACGGGTCATGGAACTCCTATGCTTTGGCATGGCCTGAGGCTTTGCCTTATAACACCACCTTCATGAGAGGCTTAACTTTTGTGTCATATAACCATTACAACTATGAGAATTTGTGGCATGGTTTATGTGCCATGGTCCCATTTGTGGCTTGGCATAAGATGAATAATAGCTCACAATTGCCCTCAAGGTGGGTTTTGTATCATTGGGGTGAGCTAAGGTTCAAGATGGGCCTGTGGGTTGACACCTTGATGGAGGCCACCTTTAATGGGCCACCAATTATTGAAAAGTTTGATGGAGTTAATGAAGATGGGCCAGTGTGCTTTGAGGAGGCTGTGGTTATGAGGCACAATGAGGGTGGCATGTCAAGAGAAAGAAGAATGGAAGTGTATGATCTAATGAGGTGCAAGGCTAGGATGTTTTGTAATGTGAGCTTAAAGGGGAGTGATGTAGAAATCAATGATAGAGGATCACCAATGATAGGGATGACTTTGTTTTTCAGGACAGGACCAAGATCTTTTAAGAATGACACAATTGTGGCTGAAATCTTTCATAAGGAGTGTGCTAAGATTGAAGGTTGCCGGTTTATGGTAGCTCATTCCAATAATCTCACCTTTTGTGAGCAGGTGAAATTGATGAGTGTGACAGATATTTTGATATCTCCACATGGTGCTCAATTGACCAACATGTTTCTCATGCAAAGAAACAGCAGTGTCATGGAATTCTTTCCCAAAGGGTGGCTGAAACTTGCTGGTGTTGGCCAATATGTTTACCATTGGATAGCTAGCTGGTCAGGAATGAAACACCAAGGTAGCTGGAGGGACCCAAGTGGGGATGAATGTCCATATTCAGACGATGATCGGAGATGCATGTCGATATACAAGAACGGTAGAATTGGACATAATGAAACCCTATTTTCAGAGTGGGCTAGAAATGTTTTGGCTGAGGTCAAGACAAGAAAGATTCAAGAAACTTCAATAAAGAGAAGAGCTTCTAGCTCTTTTGGTGGTACTTGTAGCTAA
Predicted protein sequences of Glyma08g07450
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma08g07450.2 sequence type=predicted peptide gene model=Glyma08g07450 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MTAKAHNEICRLSPQKLILIKHNRGNFTIVILITCVTFLIALHTQFFLQTPPPPSSWETSIFNTTHNELNSTVHKLRSSVTFLPLKDLRHARAPLEGHTWFMSSMYDTHEDGEVQYQQFPSESSHGKLLCLKGRDTHDGSWNSYALAWPEALPYNTTFMRGLTFVSYNHYNYENLWHGLCAMVPFVAWHKMNNSSQLPSRWVLYHWGELRFKMGLWVDTLMEATFNGPPIIEKFDGVNEDGPVCFEEAVVMRHNEGGMSRERRMEVYDLMRCKARMFCNVSLKGSDVEINDRGSPMIGMTLFFRTGPRSFKNDTIVAEIFHKECAKIEGCRFMVAHSNNLTFCEQVKLMSVTDILISPHGAQLTNMFLMQRNSSVMEFFPKGWLKLAGVGQYVYHWIASWSGMKHQGSWRDPSGDECPYSDDDRRCMSIYKNGRIGHNETLFSEWARNVLAEVKTRKIQETSIKRRASSSFGGTCS*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
