Report for Sequence Feature Glyma08g07070
Feature Type: gene_model
Chromosome: Gm08
Start: 5078215
stop: 5080706
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma08g07070
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT5G10530 AT
Annotation by Michelle Graham. TAIR10: Concanavalin A-like lectin protein kinase family protein | chr5:3324978-3326933 REVERSE LENGTH=651
SoyBase E_val: 3.00E-167 ISS
GO:0006468 GO-bp
Annotation by Michelle Graham. GO Biological Process: protein phosphorylation
SoyBase N/A ISS
GO:0005886 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane
SoyBase N/A ISS
GO:0004672 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein kinase activity
SoyBase N/A ISS
GO:0004674 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein serine/threonine kinase activity
SoyBase N/A ISS
GO:0005524 GO-mf
Annotation by Michelle Graham. GO Molecular Function: ATP binding
SoyBase N/A ISS
GO:0016301 GO-mf
Annotation by Michelle Graham. GO Molecular Function: kinase activity
SoyBase N/A ISS
GO:0016772 GO-mf
Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring phosphorus-containing groups
SoyBase N/A ISS
KOG1187
KOG
Serine/threonine protein kinase
JGI ISS
PTHR24420 Panther
FAMILY NOT NAMED
JGI ISS
PTHR24420:SF438 Panther
SUBFAMILY NOT NAMED
JGI ISS
PF00069 PFAM
Protein kinase domain
JGI ISS
PF00139 PFAM
Legume lectin domain
JGI ISS
UniRef100_G7JU30 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Lectin receptor-like kinase Tg-20 n=1 Tax=Medicago truncatula RepID=G7JU30_MEDTR
SoyBase E_val: 0 ISS
UniRef100_UPI0002338E38 UniRef
Annotation by Michelle Graham. Best UniRef hit: UPI0002338E38 related cluster n=1 Tax=unknown RepID=UPI0002338E38
SoyBase E_val: 0 ISS
Expression Patterns of Glyma08g07070
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Paralogs of Glyma08g07070
Paralog Evidence Comments
Glyma07g30250 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma08g07070 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.08g066100 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma08g07070
Coding sequences of Glyma08g07070
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma08g07070.1 sequence type=CDS gene model=Glyma08g07070 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGCAGCATCTCGTTACTGTAAGAAAACTTATGTACGTGCTTATTTTCTGCATGTAACATTAATATTCTTGCTCCTTGTAATTCCTCGTGCAGCAGCTTCATTAGCCTTCAACTATCAGCAACTTGGTGACACGGGAAACGCCCTCAAGACTTCAGGAGATGTCTATCCTGACCAAGATGTCCTCCTACTCACCCGTTATGAGCCAGATAGTTATGGTAGAGTTACATATTACGAAAATTTGCATCTTTGGGACAAGAACTCAGGAAAAGTCACAGACTTCACTACCCATTTCTCCTTTACCATCAACACCCCCAATAAAACCCATCATGGAGATGGCATCACCTTCTTTCTTGCACACCCAGACTTTCCACAATCGGGCATAGATGGAAGCGGTATCGGTCTTGCGAGCCGCGAACAACTTAAGAATCTGAATTACGCGAAGGATTATCCGTTTGTAGCGGTGGAATTCGATACCTTTGTTAATGACTGGGATCCTAAATATGACCATGTCGGTATCGATGTTAATTCTATCAACACTACTGACACTACGGAATGGTTCACAAGCATGGATGAGAGAGGATATGATGCTGATATTAGTTACGATTCTGCTTCAAACAGATTAAGTGTCACCTTAACTGGATATAAGGATAGTGTCAAAATTAAACAGCACTTATTCTCTGTGGTCAATCTGAGTGATGTCTTACCTGAATGGGTTGAAATTGGCTTCTCTTCAGCAACAGGATTTTTTTATGAGGAACATACTCTTAGCTCATGGTCCTTCAACTCTAGTTTAGACAAGGAACAACAAAAGGGTGGAAGCAAAATTGGGCTGGTGATAGGGCTGAGTGTTGGACTTGGTGCAGGGCTGAGTGTTTTAATTGTTATTTGGGGGGTAACTTTCCTTGTGAGATGGATGCTGAAGAATAGAGGTTTGGAGGAAGTCTCACTTTTTGATCATGCTATGGACAACGATTTCGAAAGAATGTCTCTACCCAAGAAGTTTTCCTATGAAGAACTTGCCAGAGCAACTAATAACTTTGCAAGAGAAAACAAAATTGGAGAGGGAGGTTTTGGAGCAGTCTACAGGGGACTTATAAGAGAGTTGAACATCCATGTTGCCATTAAGAAGGTATCTCGCAGATCTAGTCAAGGAGTGAAGGAGTATGCATCTGAAGTAAAGATCATTAGCCAACTGAGGCATAAAAATTTGGTTCAACTCTTAGGGTGGTGCCATCAGAACAATGACCTGCTGCTGGTTTATGAGTTCATGGAAAATGGAAGCTTGGATTCTTATCTGTTTAAAGGAAAAGGCCTTCTGGCATGGAAAGTGAGATATGATATTGCTAGAGGCCTGGCCTCCGCATTATTATACCTGCATGAAGAGTGGGAAGAATGTGTGCTTCATAGGGACATAAAATCCAGCAATGTTATGTTGGATTCTAATTTTGATGCAAAGCTTGGTGATTTTGGGTTAGCCAGACTAATGGATCATGCAATAGGTTCAAAAACAACTGTTTTAGCAGGAACAATTGGATATTTGCCTCCTGAAGCTGTCACAAGAGGCAAGGCTAGTAGGGAGTCTGATGTATTCAGTTTTGGAGTTGCTGCTTTGGAGATAGCCTGTGGTAGAAAGGCAATTGAACCTAATGTGAATGAAGAACAGCTCTATTTGGTGGATTGGGTTTGGGAACTCCATGGCATGGTTGATCTTCTTAAAGCATCTGATCCAAGCTTATATGGACACTTTGATGAGAAGGAAATGGAGAGGTTAATGATAGTTGGCCTGTGGTGTACTTACACAGATTTCCATCTGAGGCCTACAATTAGGCAAGTTGTTCAGGTGCTTAATTTTGAAGCTCCACTTCCCACTCTCTCACCACAGGTTCCATCCTTTTCCTATAATTCATCTTTCAGCTCTATGCCCTCTAGGACTTCTGCTTTTGCAAATAACCAATGTGTCTCTTCAACTTCAAGTAGCTTAGGCACTGGATCCTCACAATCGAACACAACTTGTGAAGTCATCATTTCTCCAGCAGCCGCACATTGA
Predicted protein sequences of Glyma08g07070
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma08g07070.1 sequence type=predicted peptide gene model=Glyma08g07070 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MAASRYCKKTYVRAYFLHVTLIFLLLVIPRAAASLAFNYQQLGDTGNALKTSGDVYPDQDVLLLTRYEPDSYGRVTYYENLHLWDKNSGKVTDFTTHFSFTINTPNKTHHGDGITFFLAHPDFPQSGIDGSGIGLASREQLKNLNYAKDYPFVAVEFDTFVNDWDPKYDHVGIDVNSINTTDTTEWFTSMDERGYDADISYDSASNRLSVTLTGYKDSVKIKQHLFSVVNLSDVLPEWVEIGFSSATGFFYEEHTLSSWSFNSSLDKEQQKGGSKIGLVIGLSVGLGAGLSVLIVIWGVTFLVRWMLKNRGLEEVSLFDHAMDNDFERMSLPKKFSYEELARATNNFARENKIGEGGFGAVYRGLIRELNIHVAIKKVSRRSSQGVKEYASEVKIISQLRHKNLVQLLGWCHQNNDLLLVYEFMENGSLDSYLFKGKGLLAWKVRYDIARGLASALLYLHEEWEECVLHRDIKSSNVMLDSNFDAKLGDFGLARLMDHAIGSKTTVLAGTIGYLPPEAVTRGKASRESDVFSFGVAALEIACGRKAIEPNVNEEQLYLVDWVWELHGMVDLLKASDPSLYGHFDEKEMERLMIVGLWCTYTDFHLRPTIRQVVQVLNFEAPLPTLSPQVPSFSYNSSFSSMPSRTSAFANNQCVSSTSSSLGTGSSQSNTTCEVIISPAAAH*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
