Glyma08g06060 - SoyBase

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Report for Sequence Feature Glyma08g06060

Feature Type:	gene_model
Chromosome:	Gm08
Start:	4304611
stop:	4308615
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma08g06060

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT1G70300	AT	Annotation by Michelle Graham. TAIR10: K+ uptake permease 6 \| chr1:26477993-26481233 REVERSE LENGTH=782	SoyBase	E_val: 0	ISS
GO:0006813	GO-bp	Annotation by Michelle Graham. GO Biological Process: potassium ion transport	SoyBase	N/A	ISS
GO:0071805	GO-bp	Annotation by Michelle Graham. GO Biological Process: potassium ion transmembrane transport	SoyBase	N/A	ISS
GO:0005886	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane	SoyBase	N/A	ISS
GO:0016020	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: membrane	SoyBase	N/A	ISS
GO:0015079	GO-mf	Annotation by Michelle Graham. GO Molecular Function: potassium ion transmembrane transporter activity	SoyBase	N/A	ISS
PF02705	PFAM	K+ potassium transporter	JGI		ISS
UniRef100_G7LE82	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Potassium transporter n=1 Tax=Medicago truncatula RepID=G7LE82_MEDTR	SoyBase	E_val: 0	ISS
UniRef100_UPI0002338B59	UniRef	Annotation by Michelle Graham. Best UniRef hit: UPI0002338B59 related cluster n=1 Tax=unknown RepID=UPI0002338B59	SoyBase	E_val: 0	ISS

Expression Patterns of Glyma08g06060

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma08g06060 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.08g056100	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma08g06060

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma08g06060

Limit To All Plant Sequences

>Glyma08g06060.2   sequence type=CDS   gene model=Glyma08g06060   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGATTCTCATCTTGATGCAATCTTTGATGAAGATCACAAGAAGAAAACATGGAAGCAAACAACTCTGCTATCCTTTCAAATTGTGGGAATAGTTTATGGTCAACTGAGCACTGCACCTTTATATGTATTTGGGACAATGCAAAAGGGAGATCTTGCATCAGAAGAAGTCGTTTATGAACTATTTTCCTTCATTTTCTGGACACTCACAATAATATCTTTGGTCAAGTATGCCTCTATAGTGTTGAAAGCAGATGATGAAGGAGAGGGTGGTATTGTTGCTTTATACTCACTGTTGTGTAGAAATGCAAAAGTTGGGCTGCTCCCATGCGACAAAAGTGCCAATGAAGTTGTGCTTTATGAAGAGAGAAGTGGTTCAAAGCTCAAAGCAGATTCAAGAGCACGAAGGGCCATTGAGAAACACAAGATCTGTCACTATTTAATATTGTTCTTAGCCCTCTTTGGTTCCTGTATGACCATTGGGGACGCAGTGCTCACTCCAGCGCTTTCAGTGTACTCAGCTTCGACCGGCGTTCAGAGATCCCTGACAGACATATTGACAGACATATTTGCCTGGTCACCAGATACTCAGCAGAACGTGTCAAATGGTCTAAGAAGATATGTACCTGTTCCCTCTGCGTGTGTTATATTGGTTGGGCTGTTCATGCTGCAGCACTGCGGTACACGTAAAATTGGGATCATGTTTGCTCCAATCATCACTGCTTGGTTGTTGTTTGTTGCTGGGGTGGGAACGTATAATGTTTTCCACTGGGATGTAAAAATTATTTATAAAATATCCCCAGTCTACATATACAAATTCATCACACATATTGACATCCACAGATGGAGGTTGTTAGGGAGCGTCATTTTATGTGTAGCAGGATCGGAGGCAATGTTTGCAGATCTAGGCCATTTCTCCAAGAAATCAATTAAGATTACCTTTATATGCTTGATCTACCCGCTTCTTCTTCTATGCTATGCTGGTCAGGCTGCATATATCTCCAAAAATTTACATGCTCCAGATTTTAATCATCTTAGTCAATCTATGCCACGTCATTGCAGACACTTGTTCATAGTATTGTCCCTACTTTCTTCAGCTGTGGGAAGCCAAGCAACCATAACAGCGTGTTTCTCCATCATTAACCAGTGTCTGGCATTAAATTGCTTTCCCAGAGTTAAAGTTATTCACACATCAAAAACGATTCATGGGCAGATTTACATCCCCGATGTCAACTGGTTATTGATGATTTTTAGCCTCACTGTCACCATTGGTTTCAGAGACATTGTGAAAATTGGCAATGCAACAGGTTTGGCTATAATTTGTGGAATGCTTGTGACAACTAGTCTGATGTCACTGATCATTGCTCTGTATTGGGAGAAGAATTTGATGGTATCTGCGTGCTTTCTTGTATGTTTTGGGTTCCTTGAGGCTGCATATCTTTCAGCATGTCTGCTAGAATTCCACAAAGGAGCTTGGTATCTGGTTGTCCTATTGGCAGTGTCAATGACAGTGATGCTTTCATGGCATTATGGAACAATGAAGAAGTACGAGTTTGATTTGCAAAACAAGGTATCAACCGAATGGCTAATAGATATTAGTCCAGGCCTTGGGATTTCCAGGGTACCCGGAATCGGCTTCATTTACACCGACATAGTAGCAGGAATCCCAGCTTTCTTTTCACATTTTATAACTAATCTTCCTGCATTTCATCAAGTGTTGATCTTGGTGTCTTTCAAGTCTATAGCTGTGCCTTATGTACCAGAAAGTGAAAGGTATCTCATTGGTAGGATTGGGCCAAAGGATTACAAAATATATCGTTGCATTGTCAGAAGTGGATATTGTGACCACATAAGGGACACTGGTCATTTTGAGGAGCAGATAATTCGTTCTATTGGGGAATTCATATCCATTGAACAGAATGACATTGAGTCCATGGTATCCCCAGATGAAAGAATGATCATTATTGGAAATTCAAATTCAAGACTAGATGGAAATGCTTTAGTTCCTCTTGATGAAGTAGACTCATCATCATGCATGGTGAACAATGAATCTCAGATAAGTCCAGTAGATCATGACGCATTGGAGAGTAGGAACAAGAGAAAAAAGGTTCGGTTCATGTTGCCTGAGAATAGTCCTAAAATGCAGGTATCTGTGAGGAAGGAGCTTTTGGAGCTAATTGATGCCAGGGAGAGTGGCAGTGCCTATTTCTTGGGGCAGTCACATTTAGTGGTGCGTGATGGCACTAACTTTCTCAAGAGATTCTTAATCATGGTCTATCGTTTCAGTGAAAAAAATTGTCGGGAATCTCCTGTTGCTCTTAAGATCCCTCATGCTGCTCTTGTAGAAGTTGGTGTGATATGTACTATATAA

Predicted protein sequences of Glyma08g06060

Limit To All Plant Sequences

>Glyma08g06060.2   sequence type=predicted peptide   gene model=Glyma08g06060   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MDSHLDAIFDEDHKKKTWKQTTLLSFQIVGIVYGQLSTAPLYVFGTMQKGDLASEEVVYELFSFIFWTLTIISLVKYASIVLKADDEGEGGIVALYSLLCRNAKVGLLPCDKSANEVVLYEERSGSKLKADSRARRAIEKHKICHYLILFLALFGSCMTIGDAVLTPALSVYSASTGVQRSLTDILTDIFAWSPDTQQNVSNGLRRYVPVPSACVILVGLFMLQHCGTRKIGIMFAPIITAWLLFVAGVGTYNVFHWDVKIIYKISPVYIYKFITHIDIHRWRLLGSVILCVAGSEAMFADLGHFSKKSIKITFICLIYPLLLLCYAGQAAYISKNLHAPDFNHLSQSMPRHCRHLFIVLSLLSSAVGSQATITACFSIINQCLALNCFPRVKVIHTSKTIHGQIYIPDVNWLLMIFSLTVTIGFRDIVKIGNATGLAIICGMLVTTSLMSLIIALYWEKNLMVSACFLVCFGFLEAAYLSACLLEFHKGAWYLVVLLAVSMTVMLSWHYGTMKKYEFDLQNKVSTEWLIDISPGLGISRVPGIGFIYTDIVAGIPAFFSHFITNLPAFHQVLILVSFKSIAVPYVPESERYLIGRIGPKDYKIYRCIVRSGYCDHIRDTGHFEEQIIRSIGEFISIEQNDIESMVSPDERMIIIGNSNSRLDGNALVPLDEVDSSSCMVNNESQISPVDHDALESRNKRKKVRFMLPENSPKMQVSVRKELLELIDARESGSAYFLGQSHLVVRDGTNFLKRFLIMVYRFSEKNCRESPVALKIPHAALVEVGVICTI*

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